RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 BRF1Q92994 677 aa16.5■□□□□ 0.23
SEC61B-201ENST00000223641 MKL1Q969V6 931 aa16.5■□□□□ 0.23
SEC61B-201ENST00000223641 KANSL2Q9H9L4 492 aa16.5■□□□□ 0.23
SEC61B-201ENST00000223641 SENP2Q9HC62 589 aa16.5■□□□□ 0.23
SEC61B-201ENST00000223641 CABP5Q9NP86 173 aa16.5■□□□□ 0.23
SEC61B-201ENST00000223641 ZBTB21Q9ULJ3 1066 aa16.5■□□□□ 0.23
SEC61B-201ENST00000223641 FZD1Q9UP38 647 aa16.5■□□□□ 0.23
SEC61B-201ENST00000223641 MYH4Q9Y623 1939 aa16.5■□□□□ 0.23
SEC61B-201ENST00000223641 ERICH2A1L162 156 aa16.49■□□□□ 0.23
SEC61B-201ENST00000223641 YY1P25490 414 aa16.49■□□□□ 0.23
SEC61B-201ENST00000223641 INPP5BP32019 993 aa16.49■□□□□ 0.23
SEC61B-201ENST00000223641 FMR1Q06787 632 aaKnown RBP eCLIP16.49■□□□□ 0.23
SEC61B-201ENST00000223641 SEPT2Q15019 361 aa16.49■□□□□ 0.23
SEC61B-201ENST00000223641 PPP4R3BQ5MIZ7 849 aa16.49■□□□□ 0.23
SEC61B-201ENST00000223641 WRNIP1Q96S55 665 aa16.49■□□□□ 0.23
SEC61B-201ENST00000223641 NYAP2Q9P242 653 aa16.49■□□□□ 0.23
SEC61B-201ENST00000223641 PHIPQ8WWQ0 1821 aa16.49■□□□□ 0.23
SEC61B-201ENST00000223641 UNCXA6NJT0 531 aa16.48■□□□□ 0.23
SEC61B-201ENST00000223641 MPHOSPH10O00566 681 aaKnown RBP16.48■□□□□ 0.23
SEC61B-201ENST00000223641 TTLL1O95922 423 aa16.48■□□□□ 0.23
SEC61B-201ENST00000223641 FKBP1BP68106 108 aa16.48■□□□□ 0.23
SEC61B-201ENST00000223641 MAP3K9P80192 1104 aa16.48■□□□□ 0.23
SEC61B-201ENST00000223641 IFIT1BQ5T764 474 aaKnown RBP16.48■□□□□ 0.23
SEC61B-201ENST00000223641 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.48■□□□□ 0.23
SEC61B-201ENST00000223641 SCYL3Q8IZE3 742 aa16.48■□□□□ 0.23
SEC61B-201ENST00000223641 ZNF784Q8NCA9 323 aaPredicted RBP16.48■□□□□ 0.23
SEC61B-201ENST00000223641 ZNF274Q96GC6 653 aaPredicted RBP16.48■□□□□ 0.23
SEC61B-201ENST00000223641 BRPF3Q9ULD4 1205 aa16.48■□□□□ 0.23
SEC61B-201ENST00000223641 TPCN1Q9ULQ1 816 aa16.48■□□□□ 0.23
SEC61B-201ENST00000223641 SYNPO2Q9UMS6 1093 aa16.48■□□□□ 0.23
SEC61B-201ENST00000223641 LIMCH1Q9UPQ0 1083 aa16.48■□□□□ 0.23
SEC61B-201ENST00000223641 PASKQ96RG2 1323 aa16.47■□□□□ 0.23
SEC61B-201ENST00000223641 TOMM70O94826 608 aa16.47■□□□□ 0.23
SEC61B-201ENST00000223641 IREB2P48200 963 aaKnown RBP16.47■□□□□ 0.23
SEC61B-201ENST00000223641 RCAN1P53805 252 aa16.47■□□□□ 0.23
SEC61B-201ENST00000223641 FGD1P98174 961 aa16.47■□□□□ 0.23
SEC61B-201ENST00000223641 APOBRQ0VD83 1088 aa16.47■□□□□ 0.23
SEC61B-201ENST00000223641 LDLRAD1Q5T700 205 aa16.47■□□□□ 0.23
SEC61B-201ENST00000223641 APOA5Q6Q788 366 aa16.47■□□□□ 0.23
SEC61B-201ENST00000223641 ZKSCAN4Q969J2 545 aaPredicted RBP16.47■□□□□ 0.23
SEC61B-201ENST00000223641 TMEM47Q9BQJ4 181 aa16.47■□□□□ 0.23
SEC61B-201ENST00000223641 TBC1D2Q9BYX2 928 aa16.47■□□□□ 0.23
SEC61B-201ENST00000223641 STX8Q9UNK0 236 aa16.47■□□□□ 0.23
SEC61B-201ENST00000223641 TOP1P11387 765 aaKnown RBP16.46■□□□□ 0.23
SEC61B-201ENST00000223641 EEF2P13639 858 aaKnown RBP16.46■□□□□ 0.23
SEC61B-201ENST00000223641 PDIA3P30101 505 aaKnown RBP16.46■□□□□ 0.23
SEC61B-201ENST00000223641 TROAPQ12815 778 aa16.46■□□□□ 0.23
SEC61B-201ENST00000223641 PRKG1Q13976 671 aa16.46■□□□□ 0.23
SEC61B-201ENST00000223641 RAB3GAP1Q15042 981 aa16.46■□□□□ 0.23
SEC61B-201ENST00000223641 ME3Q16798 604 aa16.46■□□□□ 0.23
SEC61B-201ENST00000223641 CST9Q5W186 159 aa16.46■□□□□ 0.23
SEC61B-201ENST00000223641 ARMC9Q7Z3E5 817 aa16.46■□□□□ 0.23
SEC61B-201ENST00000223641 CLEC10AQ8IUN9 316 aa16.46■□□□□ 0.23
SEC61B-201ENST00000223641 ANKRD13AQ8IZ07 590 aa16.46■□□□□ 0.23
SEC61B-201ENST00000223641 RBM46Q8TBY0 533 aaKnown RBP16.46■□□□□ 0.23
SEC61B-201ENST00000223641 ZSCAN31Q96LW9 406 aaPredicted RBP16.46■□□□□ 0.23
SEC61B-201ENST00000223641 LARP6Q9BRS8 491 aaKnown RBP16.46■□□□□ 0.23
SEC61B-201ENST00000223641 NID2Q14112 1375 aa16.46■□□□□ 0.23
SEC61B-201ENST00000223641 KLF18A0A0U1RQI7 1052 aa16.45■□□□□ 0.22
SEC61B-201ENST00000223641 CCDC69A6NI79 296 aa16.45■□□□□ 0.22
SEC61B-201ENST00000223641 K7ELQ4 463 aaPredicted RBP16.45■□□□□ 0.22
SEC61B-201ENST00000223641 PTPRAP18433 802 aa16.45■□□□□ 0.22
SEC61B-201ENST00000223641 ANP32AP39687 249 aaKnown RBP16.45■□□□□ 0.22
SEC61B-201ENST00000223641 ICA1Q05084 483 aa16.45■□□□□ 0.22
SEC61B-201ENST00000223641 VGLL4Q14135 290 aa16.45■□□□□ 0.22
SEC61B-201ENST00000223641 MOB2Q70IA6 237 aa16.45■□□□□ 0.22
SEC61B-201ENST00000223641 ZNF654Q8IZM8 581 aa16.45■□□□□ 0.22
SEC61B-201ENST00000223641 PNMA1Q8ND90 353 aa16.45■□□□□ 0.22
SEC61B-201ENST00000223641 SMC1BQ8NDV3 1235 aa16.45■□□□□ 0.22
SEC61B-201ENST00000223641 TMX3Q96JJ7 454 aa16.45■□□□□ 0.22
SEC61B-201ENST00000223641 MAP3K14Q99558 947 aa16.45■□□□□ 0.22
SEC61B-201ENST00000223641 WDR18Q9BV38 432 aa16.45■□□□□ 0.22
SEC61B-201ENST00000223641 CLIP2Q9UDT6 1046 aa16.45■□□□□ 0.22
SEC61B-201ENST00000223641 HPS5Q9UPZ3 1129 aa16.45■□□□□ 0.22
SEC61B-201ENST00000223641 SNCAIPQ9Y6H5 919 aa16.45■□□□□ 0.22
SEC61B-201ENST00000223641 A0A1W2PRG0 241 aa16.44■□□□□ 0.22
SEC61B-201ENST00000223641 USP17L5A8MUK1 530 aa16.44■□□□□ 0.22
SEC61B-201ENST00000223641 PFKFB2O60825 505 aa16.44■□□□□ 0.22
SEC61B-201ENST00000223641 LARGE1O95461 756 aa16.44■□□□□ 0.22
SEC61B-201ENST00000223641 KAT14Q9H8E8 782 aa16.44■□□□□ 0.22
SEC61B-201ENST00000223641 GBA2Q9HCG7 927 aaPredicted RBP16.44■□□□□ 0.22
SEC61B-201ENST00000223641 SH2B1Q9NRF2 756 aaPredicted RBP16.44■□□□□ 0.22
SEC61B-201ENST00000223641 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.44■□□□□ 0.22
SEC61B-201ENST00000223641 TMX2Q9Y320 296 aa16.44■□□□□ 0.22
SEC61B-201ENST00000223641 SLC12A7Q9Y666 1083 aa16.44■□□□□ 0.22
SEC61B-201ENST00000223641 DDAH1O94760 285 aa16.43■□□□□ 0.22
SEC61B-201ENST00000223641 CELF2O95319 508 aaKnown RBP16.43■□□□□ 0.22
SEC61B-201ENST00000223641 SNHG28P0DPA3 235 aa16.43■□□□□ 0.22
SEC61B-201ENST00000223641 CUL4AQ13619 759 aa16.43■□□□□ 0.22
SEC61B-201ENST00000223641 NFXL1Q6ZNB6 911 aa16.43■□□□□ 0.22
SEC61B-201ENST00000223641 CATIPQ7Z7H3 387 aa16.43■□□□□ 0.22
SEC61B-201ENST00000223641 HSCBQ8IWL3 235 aa16.43■□□□□ 0.22
SEC61B-201ENST00000223641 ACER1Q8TDN7 264 aa16.43■□□□□ 0.22
SEC61B-201ENST00000223641 ARHGEF10LQ9HCE6 1279 aa16.43■□□□□ 0.22
SEC61B-201ENST00000223641 PICK1Q9NRD5 415 aa16.43■□□□□ 0.22
SEC61B-201ENST00000223641 CSADQ9Y600 493 aa16.43■□□□□ 0.22
SEC61B-201ENST00000223641 UBE2Q2LH0YL09 131 aa16.42■□□□□ 0.22
SEC61B-201ENST00000223641 ZBTB43O43298 467 aa16.42■□□□□ 0.22
SEC61B-201ENST00000223641 CALM1P0DP23 149 aa16.42■□□□□ 0.22
SEC61B-201ENST00000223641 CALM2P0DP24 149 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms