RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 LPIN2Q92539 896 aa18.13■□□□□ 0.49
SF3A2-201ENST00000221494 SMARCE1Q969G3 411 aa18.13■□□□□ 0.49
SF3A2-201ENST00000221494 CCDC34Q96HJ3 373 aa18.13■□□□□ 0.49
SF3A2-201ENST00000221494 WDR24Q96S15 920 aa18.13■□□□□ 0.49
SF3A2-201ENST00000221494 RPS6KA5O75582 802 aa18.13■□□□□ 0.49
SF3A2-201ENST00000221494 GNL2Q13823 731 aaKnown RBP18.13■□□□□ 0.49
SF3A2-201ENST00000221494 LONRF2Q1L5Z9 754 aa18.13■□□□□ 0.49
SF3A2-201ENST00000221494 TMEM132AQ24JP5 1023 aa18.13■□□□□ 0.49
SF3A2-201ENST00000221494 TTC39AQ5SRH9 613 aa18.13■□□□□ 0.49
SF3A2-201ENST00000221494 PRR5LQ6MZQ0 368 aa18.13■□□□□ 0.49
SF3A2-201ENST00000221494 COL23A1Q86Y22 540 aaPredicted RBP18.13■□□□□ 0.49
SF3A2-201ENST00000221494 CNBD1Q8NA66 436 aa18.13■□□□□ 0.49
SF3A2-201ENST00000221494 CELF1Q92879 486 aaKnown RBP18.13■□□□□ 0.49
SF3A2-201ENST00000221494 CCDC51Q96ER9 411 aa18.13■□□□□ 0.49
SF3A2-201ENST00000221494 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.13■□□□□ 0.495e-7■■■□□ 14.6
SF3A2-201ENST00000221494 GBP3Q9H0R5 595 aa18.13■□□□□ 0.49
SF3A2-201ENST00000221494 GPHNQ9NQX3 736 aaPredicted RBP18.13■□□□□ 0.49
SF3A2-201ENST00000221494 BSDC1Q9NW68 430 aaPredicted RBP18.13■□□□□ 0.49
SF3A2-201ENST00000221494 RAI14Q9P0K7 980 aa18.13■□□□□ 0.49
SF3A2-201ENST00000221494 FEZ2Q9UHY8 353 aaPredicted RBP18.13■□□□□ 0.49
SF3A2-201ENST00000221494 CHD4Q14839 1912 aa18.13■□□□□ 0.49
SF3A2-201ENST00000221494 COL4A1P02462 1669 aa18.12■□□□□ 0.49
SF3A2-201ENST00000221494 SH2B2O14492 632 aaPredicted RBP18.12■□□□□ 0.49
SF3A2-201ENST00000221494 SEMA3EO15041 775 aa18.12■□□□□ 0.49
SF3A2-201ENST00000221494 IVLP07476 585 aa18.12■□□□□ 0.49
SF3A2-201ENST00000221494 ZSCAN26Q16670 478 aa18.12■□□□□ 0.49
SF3A2-201ENST00000221494 A0A1B0GTH6 734 aa18.11■□□□□ 0.49
SF3A2-201ENST00000221494 SNAP23O00161 211 aa18.11■□□□□ 0.49
SF3A2-201ENST00000221494 SERPINB2P05120 415 aa18.11■□□□□ 0.49
SF3A2-201ENST00000221494 FECHP22830 423 aa18.11■□□□□ 0.49
SF3A2-201ENST00000221494 CHRNDQ07001 517 aa18.11■□□□□ 0.49
SF3A2-201ENST00000221494 MORC3Q14149 939 aa18.11■□□□□ 0.49
SF3A2-201ENST00000221494 POSTNQ15063 836 aa18.11■□□□□ 0.49
SF3A2-201ENST00000221494 WASHC4Q2M389 1173 aa18.11■□□□□ 0.49
SF3A2-201ENST00000221494 LONRF3Q496Y0 759 aa18.11■□□□□ 0.49
SF3A2-201ENST00000221494 HDXQ7Z353 690 aa18.11■□□□□ 0.49
SF3A2-201ENST00000221494 SGMS1Q86VZ5 419 aa18.11■□□□□ 0.49
SF3A2-201ENST00000221494 ZNF512BQ96KM6 892 aaPredicted RBP18.11■□□□□ 0.49
SF3A2-201ENST00000221494 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.11■□□□□ 0.49
SF3A2-201ENST00000221494 MAN1B1Q9UKM7 699 aa18.11■□□□□ 0.49
SF3A2-201ENST00000221494 CHMP4BP1P59074 171 aa18.11■□□□□ 0.49
SF3A2-201ENST00000221494 DDR1Q08345 913 aa18.11■□□□□ 0.49
SF3A2-201ENST00000221494 SCARF1Q14162 830 aa18.11■□□□□ 0.49
SF3A2-201ENST00000221494 NR1I3Q14994 352 aa18.11■□□□□ 0.49
SF3A2-201ENST00000221494 TIAM2Q8IVF5 1701 aa18.11■□□□□ 0.49
SF3A2-201ENST00000221494 NEK11Q8NG66 645 aa18.11■□□□□ 0.49
SF3A2-201ENST00000221494 CAMKK2Q96RR4 588 aa18.11■□□□□ 0.49
SF3A2-201ENST00000221494 MYO1AQ9UBC5 1043 aa18.11■□□□□ 0.49
SF3A2-201ENST00000221494 CDC23Q9UJX2 597 aa18.11■□□□□ 0.49
SF3A2-201ENST00000221494 AKAP11Q9UKA4 1901 aa18.11■□□□□ 0.49
SF3A2-201ENST00000221494 AKR1B15C9JRZ8 316 aaPredicted RBP18.1■□□□□ 0.49
SF3A2-201ENST00000221494 PLCD1P51178 756 aa18.1■□□□□ 0.49
SF3A2-201ENST00000221494 RPS8P62241 208 aaKnown RBP18.1■□□□□ 0.49
SF3A2-201ENST00000221494 APOA5Q6Q788 366 aa18.1■□□□□ 0.49
SF3A2-201ENST00000221494 FOXP4Q8IVH2 680 aaPredicted RBP18.1■□□□□ 0.49
SF3A2-201ENST00000221494 FLAD1Q8NFF5 587 aa18.1■□□□□ 0.49
SF3A2-201ENST00000221494 SPATA20Q8TB22 786 aa18.1■□□□□ 0.49
SF3A2-201ENST00000221494 NFE2L3Q9Y4A8 694 aa18.1■□□□□ 0.49
SF3A2-201ENST00000221494 MYO5AQ9Y4I1 1855 aaKnown RBP18.1■□□□□ 0.49
SF3A2-201ENST00000221494 POLRMTO00411 1230 aaKnown RBP18.1■□□□□ 0.49
SF3A2-201ENST00000221494 KIF5CO60282 957 aa18.1■□□□□ 0.49
SF3A2-201ENST00000221494 PTPREP23469 700 aa18.1■□□□□ 0.49
SF3A2-201ENST00000221494 IARSP41252 1262 aaKnown RBP18.1■□□□□ 0.49
SF3A2-201ENST00000221494 ST5P78524 1137 aa18.1■□□□□ 0.49
SF3A2-201ENST00000221494 TOGARAM2Q6ZUX3 1019 aa18.1■□□□□ 0.49
SF3A2-201ENST00000221494 CCDC12Q8WUD4 166 aaPredicted RBP18.1■□□□□ 0.49
SF3A2-201ENST00000221494 DHX58Q96C10 678 aa18.1■□□□□ 0.49
SF3A2-201ENST00000221494 CTAGE1Q96RT6 745 aa18.1■□□□□ 0.49
SF3A2-201ENST00000221494 ADAM21Q9UKJ8 722 aa18.1■□□□□ 0.49
SF3A2-201ENST00000221494 MINPP1Q9UNW1 487 aa18.1■□□□□ 0.49
SF3A2-201ENST00000221494 CEP131Q9UPN4 1083 aa18.1■□□□□ 0.49
SF3A2-201ENST00000221494 TNS1Q9HBL0 1735 aaKnown RBP18.09■□□□□ 0.49
SF3A2-201ENST00000221494 ITIH6Q6UXX5 1313 aa18.09■□□□□ 0.49
SF3A2-201ENST00000221494 GPAA1O43292 621 aa18.09■□□□□ 0.49
SF3A2-201ENST00000221494 BMP6P22004 513 aa18.09■□□□□ 0.49
SF3A2-201ENST00000221494 ACTN2P35609 894 aa18.09■□□□□ 0.49
SF3A2-201ENST00000221494 LIFRP42702 1097 aa18.09■□□□□ 0.49
SF3A2-201ENST00000221494 HAND2P61296 217 aa18.09■□□□□ 0.49
SF3A2-201ENST00000221494 EN1Q05925 392 aaPredicted RBP18.09■□□□□ 0.49
SF3A2-201ENST00000221494 EZH2Q15910 746 aaKnown RBP18.09■□□□□ 0.49
SF3A2-201ENST00000221494 RILPL1Q5EBL4 403 aa18.09■□□□□ 0.49
SF3A2-201ENST00000221494 CTR9Q6PD62 1173 aa18.09■□□□□ 0.49
SF3A2-201ENST00000221494 RASSF4Q9H2L5 321 aa18.09■□□□□ 0.49
SF3A2-201ENST00000221494 ACBD3Q9H3P7 528 aa18.09■□□□□ 0.49
SF3A2-201ENST00000221494 EFCC1Q9HA90 598 aa18.09■□□□□ 0.49
SF3A2-201ENST00000221494 ZBTB43O43298 467 aa18.08■□□□□ 0.49
SF3A2-201ENST00000221494 PPFIA3O75145 1194 aa18.08■□□□□ 0.49
SF3A2-201ENST00000221494 SLC5A1P13866 664 aa18.08■□□□□ 0.49
SF3A2-201ENST00000221494 PHKA1P46020 1223 aa18.08■□□□□ 0.49
SF3A2-201ENST00000221494 RCAN1P53805 252 aa18.08■□□□□ 0.49
SF3A2-201ENST00000221494 FKBP4Q02790 459 aaKnown RBP eCLIP18.08■□□□□ 0.49
SF3A2-201ENST00000221494 PDE4BQ07343 736 aa18.08■□□□□ 0.49
SF3A2-201ENST00000221494 TTF1Q15361 905 aaPredicted RBP18.08■□□□□ 0.49
SF3A2-201ENST00000221494 SAFBQ15424 915 aaKnown RBP eCLIP18.08■□□□□ 0.49
SF3A2-201ENST00000221494 ALX1Q15699 326 aa18.08■□□□□ 0.49
SF3A2-201ENST00000221494 NTRK3Q16288 839 aa18.08■□□□□ 0.49
SF3A2-201ENST00000221494 ISM2Q6H9L7 571 aa18.08■□□□□ 0.49
SF3A2-201ENST00000221494 NLGN1Q8N2Q7 840 aa18.08■□□□□ 0.49
SF3A2-201ENST00000221494 PDILTQ8N807 584 aa18.08■□□□□ 0.49
SF3A2-201ENST00000221494 MTA3Q9BTC8 594 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms