RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 SEPT12Q8IYM1 358 aa11.92□□□□□ -0.5
VPS18-201ENST00000220509 MRFAP1L1Q96HT8 127 aa11.92□□□□□ -0.5
VPS18-201ENST00000220509 PUS7LQ9H0K6 701 aaKnown RBP11.92□□□□□ -0.5
VPS18-201ENST00000220509 NWD1Q149M9 1564 aa11.92□□□□□ -0.5
VPS18-201ENST00000220509 TSPY3P0CV98 308 aa11.92□□□□□ -0.5
VPS18-201ENST00000220509 TSPY8P0CW00 308 aa11.92□□□□□ -0.5
VPS18-201ENST00000220509 SMC1AQ14683 1233 aaKnown RBP11.92□□□□□ -0.5
VPS18-201ENST00000220509 BRAPQ7Z569 592 aa11.92□□□□□ -0.5
VPS18-201ENST00000220509 NOC3LQ8WTT2 800 aaKnown RBP11.92□□□□□ -0.5
VPS18-201ENST00000220509 TTC14Q96N46 770 aa11.92□□□□□ -0.5
VPS18-201ENST00000220509 AATFQ9NY61 560 aaKnown RBP eCLIP11.92□□□□□ -0.5
VPS18-201ENST00000220509 PDIA3P30101 505 aaKnown RBP11.91□□□□□ -0.5
VPS18-201ENST00000220509 AFF2P51816 1311 aa11.91□□□□□ -0.5
VPS18-201ENST00000220509 COL9A3Q14050 684 aaPredicted RBP11.91□□□□□ -0.5
VPS18-201ENST00000220509 FAM196AQ6ZSG2 479 aa11.91□□□□□ -0.5
VPS18-201ENST00000220509 MROH5Q6ZUA9 1318 aa11.91□□□□□ -0.5
VPS18-201ENST00000220509 PLA2G4DQ86XP0 818 aa11.91□□□□□ -0.5
VPS18-201ENST00000220509 CCDC12Q8WUD4 166 aaPredicted RBP11.91□□□□□ -0.5
VPS18-201ENST00000220509 DHX58Q96C10 678 aa11.91□□□□□ -0.5
VPS18-201ENST00000220509 NYXQ9GZU5 481 aa11.91□□□□□ -0.5
VPS18-201ENST00000220509 LCMT1Q9UIC8 334 aa11.91□□□□□ -0.5
VPS18-201ENST00000220509 RRP15Q9Y3B9 282 aaKnown RBP11.91□□□□□ -0.5
VPS18-201ENST00000220509 PICALMQ13492 652 aa11.91□□□□□ -0.5
VPS18-201ENST00000220509 ANO1Q5XXA6 986 aa11.91□□□□□ -0.5
VPS18-201ENST00000220509 TMEM87BQ96K49 555 aa11.91□□□□□ -0.5
VPS18-201ENST00000220509 PPP1R13BQ96KQ4 1090 aa11.91□□□□□ -0.5
VPS18-201ENST00000220509 CABP5Q9NP86 173 aa11.91□□□□□ -0.5
VPS18-201ENST00000220509 KCNJ14Q9UNX9 436 aa11.91□□□□□ -0.5
VPS18-201ENST00000220509 PFKFB2O60825 505 aa11.91□□□□□ -0.5
VPS18-201ENST00000220509 HIBADHP31937 336 aaKnown RBP11.91□□□□□ -0.5
VPS18-201ENST00000220509 UBASH3AP57075 661 aa11.91□□□□□ -0.5
VPS18-201ENST00000220509 KRT40Q6A162 431 aa11.91□□□□□ -0.5
VPS18-201ENST00000220509 ZNF232Q9UNY5 417 aa11.91□□□□□ -0.5
VPS18-201ENST00000220509 TRIM75PA6NK02 468 aa11.9□□□□□ -0.5
VPS18-201ENST00000220509 CYP2C19P33261 490 aa11.9□□□□□ -0.5
VPS18-201ENST00000220509 EPS15P42566 896 aa11.9□□□□□ -0.5
VPS18-201ENST00000220509 SETDB1Q15047 1291 aa11.9□□□□□ -0.5
VPS18-201ENST00000220509 ERFEQ4G0M1 354 aa11.9□□□□□ -0.5
VPS18-201ENST00000220509 DIS3L2Q8IYB7 885 aaKnown RBP11.9□□□□□ -0.5
VPS18-201ENST00000220509 KCNV2Q8TDN2 545 aa11.9□□□□□ -0.5
VPS18-201ENST00000220509 LZTFL1Q9NQ48 299 aa11.9□□□□□ -0.5
VPS18-201ENST00000220509 TAF6LQ9Y6J9 622 aa11.9□□□□□ -0.5
VPS18-201ENST00000220509 RGPD5Q99666 1765 aa11.9□□□□□ -0.5
VPS18-201ENST00000220509 RIMBP2O15034 1052 aa11.9□□□□□ -0.5
VPS18-201ENST00000220509 CIAO1O76071 339 aa11.9□□□□□ -0.5
VPS18-201ENST00000220509 RHOXF2BP0C7M4 288 aa11.9□□□□□ -0.5
VPS18-201ENST00000220509 UBA7P41226 1012 aa11.9□□□□□ -0.5
VPS18-201ENST00000220509 IRX1P78414 480 aaPredicted RBP11.9□□□□□ -0.5
VPS18-201ENST00000220509 CCDC43Q96MW1 224 aaKnown RBP11.9□□□□□ -0.5
VPS18-201ENST00000220509 RHOXF2Q9BQY4 288 aa11.9□□□□□ -0.5
VPS18-201ENST00000220509 GPR108Q9NPR9 543 aa11.9□□□□□ -0.5
VPS18-201ENST00000220509 HEATR3Q7Z4Q2 680 aa11.9□□□□□ -0.5
VPS18-201ENST00000220509 IFNL3Q8IZI9 196 aa11.9□□□□□ -0.5
VPS18-201ENST00000220509 ISCA1Q9BUE6 129 aa11.9□□□□□ -0.5
VPS18-201ENST00000220509 TANGO6Q9C0B7 1094 aa11.9□□□□□ -0.5
VPS18-201ENST00000220509 V9GY48 417 aaPredicted RBP11.9□□□□□ -0.5
VPS18-201ENST00000220509 OATP04181 439 aa11.89□□□□□ -0.51
VPS18-201ENST00000220509 LDHBP07195 334 aaKnown RBP11.89□□□□□ -0.51
VPS18-201ENST00000220509 SWT1Q5T5J6 900 aaKnown RBP11.89□□□□□ -0.51
VPS18-201ENST00000220509 ZNF274Q96GC6 653 aaPredicted RBP11.89□□□□□ -0.51
VPS18-201ENST00000220509 DENND2AQ9ULE3 1009 aa11.89□□□□□ -0.51
VPS18-201ENST00000220509 CHRNDQ07001 517 aa11.89□□□□□ -0.51
VPS18-201ENST00000220509 AKNAD1Q5T1N1 836 aa11.89□□□□□ -0.51
VPS18-201ENST00000220509 ATG9AQ7Z3C6 839 aa11.89□□□□□ -0.51
VPS18-201ENST00000220509 SAP30BPQ9UHR5 308 aaKnown RBP11.89□□□□□ -0.51
VPS18-201ENST00000220509 STX17P56962 302 aa11.89□□□□□ -0.51
VPS18-201ENST00000220509 RPS8P62241 208 aaKnown RBP11.89□□□□□ -0.51
VPS18-201ENST00000220509 SCARF1Q14162 830 aa11.89□□□□□ -0.51
VPS18-201ENST00000220509 DPCR1Q3MIW9 517 aa11.89□□□□□ -0.51
VPS18-201ENST00000220509 FMNL3Q8IVF7 1028 aa11.89□□□□□ -0.51
VPS18-201ENST00000220509 DESI2Q9BSY9 194 aa11.89□□□□□ -0.51
VPS18-201ENST00000220509 ZNF446Q9NWS9 450 aa11.89□□□□□ -0.51
VPS18-201ENST00000220509 CHCHD3Q9NX63 227 aaKnown RBP11.89□□□□□ -0.51
VPS18-201ENST00000220509 ZNF142P52746 1687 aaPredicted RBP11.89□□□□□ -0.51
VPS18-201ENST00000220509 MECOMQ03112 1051 aa11.88□□□□□ -0.51
VPS18-201ENST00000220509 PPARDQ03181 441 aa11.88□□□□□ -0.51
VPS18-201ENST00000220509 PACS2Q86VP3 889 aa11.88□□□□□ -0.51
VPS18-201ENST00000220509 CNBD1Q8NA66 436 aa11.88□□□□□ -0.51
VPS18-201ENST00000220509 NSUN7Q8NE18 718 aaKnown RBP11.88□□□□□ -0.51
VPS18-201ENST00000220509 GDAP1L1Q96MZ0 367 aa11.88□□□□□ -0.51
VPS18-201ENST00000220509 THRAP3Q9Y2W1 955 aaKnown RBP11.88□□□□□ -0.51
VPS18-201ENST00000220509 RIPOR2Q9Y4F9 1068 aa11.88□□□□□ -0.51
VPS18-201ENST00000220509 SPATA31A5Q5VU36 1347 aa11.88□□□□□ -0.51
VPS18-201ENST00000220509 SPATA31A7Q8IWB4 1347 aa11.88□□□□□ -0.51
VPS18-201ENST00000220509 EIF5P55010 431 aaKnown RBP11.88□□□□□ -0.51
VPS18-201ENST00000220509 TOB2Q14106 344 aaPredicted RBP11.88□□□□□ -0.51
VPS18-201ENST00000220509 SYCP1Q15431 976 aa11.88□□□□□ -0.51
VPS18-201ENST00000220509 KIF4BQ2VIQ3 1234 aa11.88□□□□□ -0.51
VPS18-201ENST00000220509 MYSM1Q5VVJ2 828 aa11.88□□□□□ -0.51
VPS18-201ENST00000220509 MSL1Q68DK7 614 aa11.88□□□□□ -0.51
VPS18-201ENST00000220509 TBC1D22AQ8WUA7 517 aa11.88□□□□□ -0.51
VPS18-201ENST00000220509 GJB4Q9NTQ9 266 aa11.88□□□□□ -0.51
VPS18-201ENST00000220509 FRMD4BQ9Y2L6 1034 aa11.88□□□□□ -0.51
VPS18-201ENST00000220509 SLIT3O75094 1523 aa11.88□□□□□ -0.51
VPS18-201ENST00000220509 USP17L12C9JPN9 530 aa11.88□□□□□ -0.51
VPS18-201ENST00000220509 USP17L21D6R901 530 aa11.88□□□□□ -0.51
VPS18-201ENST00000220509 NAT1P18440 290 aa11.88□□□□□ -0.51
VPS18-201ENST00000220509 RFX5P48382 616 aaPredicted RBP11.88□□□□□ -0.51
VPS18-201ENST00000220509 CCDC150Q8NCX0 1101 aa11.88□□□□□ -0.51
VPS18-201ENST00000220509 MRFAP1Q9Y605 127 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms