RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 SCARF1Q14162 830 aa10.95□□□□□ -0.66
TUBB1-201ENST00000217133 PACS2Q86VP3 889 aa10.95□□□□□ -0.66
TUBB1-201ENST00000217133 MSL3Q8N5Y2 521 aaKnown RBP10.95□□□□□ -0.66
TUBB1-201ENST00000217133 CCDC51Q96ER9 411 aa10.95□□□□□ -0.66
TUBB1-201ENST00000217133 FBXO2Q9UK22 296 aaPredicted RBP10.95□□□□□ -0.66
TUBB1-201ENST00000217133 ZNF330Q9Y3S2 320 aaPredicted RBP10.95□□□□□ -0.66
TUBB1-201ENST00000217133 UBN2Q6ZU65 1347 aa10.95□□□□□ -0.66
TUBB1-201ENST00000217133 PES1O00541 588 aaKnown RBP10.94□□□□□ -0.66
TUBB1-201ENST00000217133 PPFIA4O75335 1185 aa10.94□□□□□ -0.66
TUBB1-201ENST00000217133 SARSP49591 514 aaKnown RBP10.94□□□□□ -0.66
TUBB1-201ENST00000217133 RRP12Q5JTH9 1297 aaKnown RBP10.94□□□□□ -0.66
TUBB1-201ENST00000217133 PTF1AQ7RTS3 328 aa10.94□□□□□ -0.66
TUBB1-201ENST00000217133 MICALL1Q8N3F8 863 aa10.94□□□□□ -0.66
TUBB1-201ENST00000217133 BCL9LQ86UU0 1499 aa10.94□□□□□ -0.66
TUBB1-201ENST00000217133 SPATA31A5Q5VU36 1347 aa10.94□□□□□ -0.66
TUBB1-201ENST00000217133 SPATA31A6Q5VVP1 1343 aa10.94□□□□□ -0.66
TUBB1-201ENST00000217133 SPATA31A7Q8IWB4 1347 aa10.94□□□□□ -0.66
TUBB1-201ENST00000217133 RANBP6O60518 1105 aaKnown RBP10.94□□□□□ -0.66
TUBB1-201ENST00000217133 MCM3P25205 808 aa10.94□□□□□ -0.66
TUBB1-201ENST00000217133 FXR1P51114 621 aaKnown RBP eCLIP10.94□□□□□ -0.66
TUBB1-201ENST00000217133 CORO7P57737 925 aa10.94□□□□□ -0.66
TUBB1-201ENST00000217133 SMYD4Q8IYR2 804 aaPredicted RBP10.94□□□□□ -0.66
TUBB1-201ENST00000217133 CAGE1Q8TC20 777 aa10.94□□□□□ -0.66
TUBB1-201ENST00000217133 GDAP1L1Q96MZ0 367 aa10.94□□□□□ -0.66
TUBB1-201ENST00000217133 MED15Q96RN5 788 aa10.94□□□□□ -0.66
TUBB1-201ENST00000217133 ADD3Q9UEY8 706 aaKnown RBP10.94□□□□□ -0.66
TUBB1-201ENST00000217133 PCDHB6Q9Y5E3 794 aa10.94□□□□□ -0.66
TUBB1-201ENST00000217133 CIAO1O76071 339 aa10.94□□□□□ -0.66
TUBB1-201ENST00000217133 TSR1Q2NL82 804 aaKnown RBP10.94□□□□□ -0.66
TUBB1-201ENST00000217133 NT5DC1Q5TFE4 455 aa10.94□□□□□ -0.66
TUBB1-201ENST00000217133 CYP26C1Q6V0L0 522 aa10.94□□□□□ -0.66
TUBB1-201ENST00000217133 TTLL7Q6ZT98 887 aa10.94□□□□□ -0.66
TUBB1-201ENST00000217133 USP49Q70CQ1 688 aa10.94□□□□□ -0.66
TUBB1-201ENST00000217133 CSRNP2Q9H175 543 aa10.94□□□□□ -0.66
TUBB1-201ENST00000217133 VPS16Q9H269 839 aa10.94□□□□□ -0.66
TUBB1-201ENST00000217133 LMO7Q8WWI1 1683 aa10.94□□□□□ -0.66
TUBB1-201ENST00000217133 GOLGB1Q14789 3259 aaKnown RBP10.94□□□□□ -0.66
TUBB1-201ENST00000217133 KDM6AO15550 1401 aaPredicted RBP10.94□□□□□ -0.66
TUBB1-201ENST00000217133 MMP1P03956 469 aa10.93□□□□□ -0.66
TUBB1-201ENST00000217133 LRP10Q7Z4F1 713 aa10.93□□□□□ -0.66
TUBB1-201ENST00000217133 FNBP4Q8N3X1 1017 aaPredicted RBP10.93□□□□□ -0.66
TUBB1-201ENST00000217133 DCAF5Q96JK2 942 aa10.93□□□□□ -0.66
TUBB1-201ENST00000217133 QTRT2Q9H974 415 aaKnown RBP10.93□□□□□ -0.66
TUBB1-201ENST00000217133 PCDH11XQ9BZA7 1347 aa10.93□□□□□ -0.66
TUBB1-201ENST00000217133 PCDH11YQ9BZA8 1340 aa10.93□□□□□ -0.66
TUBB1-201ENST00000217133 KCNQ2O43526 872 aa10.93□□□□□ -0.66
TUBB1-201ENST00000217133 CASP1P29466 404 aa10.93□□□□□ -0.66
TUBB1-201ENST00000217133 KRT9P35527 623 aa10.93□□□□□ -0.66
TUBB1-201ENST00000217133 NR5A1Q13285 461 aa10.93□□□□□ -0.66
TUBB1-201ENST00000217133 CAPZA3Q96KX2 299 aa10.93□□□□□ -0.66
TUBB1-201ENST00000217133 CABP5Q9NP86 173 aa10.93□□□□□ -0.66
TUBB1-201ENST00000217133 MYO1AQ9UBC5 1043 aa10.93□□□□□ -0.66
TUBB1-201ENST00000217133 ACTN4O43707 911 aaKnown RBP10.93□□□□□ -0.66
TUBB1-201ENST00000217133 COBLO75128 1261 aa10.93□□□□□ -0.66
TUBB1-201ENST00000217133 ABL1P00519 1130 aa10.93□□□□□ -0.66
TUBB1-201ENST00000217133 GYPCP04921 128 aa10.93□□□□□ -0.66
TUBB1-201ENST00000217133 TOB1P50616 345 aaPredicted RBP10.93□□□□□ -0.66
TUBB1-201ENST00000217133 KCNQ4P56696 695 aa10.93□□□□□ -0.66
TUBB1-201ENST00000217133 STIM1Q13586 685 aa10.93□□□□□ -0.66
TUBB1-201ENST00000217133 NTRK3Q16288 839 aa10.93□□□□□ -0.66
TUBB1-201ENST00000217133 MARCH10Q8NA82 808 aaPredicted RBP10.93□□□□□ -0.66
TUBB1-201ENST00000217133 NUP133Q8WUM0 1156 aa10.93□□□□□ -0.66
TUBB1-201ENST00000217133 FAM107BQ9H098 131 aa10.93□□□□□ -0.66
TUBB1-201ENST00000217133 BRMS1Q9HCU9 246 aa10.93□□□□□ -0.66
TUBB1-201ENST00000217133 CTNND2Q9UQB3 1225 aa10.93□□□□□ -0.66
TUBB1-201ENST00000217133 SRPRBQ9Y5M8 271 aaKnown RBP10.93□□□□□ -0.66
TUBB1-201ENST00000217133 ABCA3Q99758 1704 aa10.93□□□□□ -0.66
TUBB1-201ENST00000217133 ENC1O14682 589 aa10.92□□□□□ -0.66
TUBB1-201ENST00000217133 FMNL1O95466 1100 aaPredicted RBP10.92□□□□□ -0.66
TUBB1-201ENST00000217133 GUCY1A2P33402 732 aa10.92□□□□□ -0.66
TUBB1-201ENST00000217133 RTN1Q16799 776 aa10.92□□□□□ -0.66
TUBB1-201ENST00000217133 EFCAB13Q8IY85 973 aa10.92□□□□□ -0.66
TUBB1-201ENST00000217133 AIDAQ96BJ3 306 aa10.92□□□□□ -0.66
TUBB1-201ENST00000217133 SEC31BQ9NQW1 1179 aa10.92□□□□□ -0.66
TUBB1-201ENST00000217133 ASAP1Q9ULH1 1129 aa10.92□□□□□ -0.66
TUBB1-201ENST00000217133 TBC1D2BQ9UPU7 963 aa10.92□□□□□ -0.66
TUBB1-201ENST00000217133 ERICH2A1L162 156 aa10.92□□□□□ -0.66
TUBB1-201ENST00000217133 CDC25AP30304 524 aa10.92□□□□□ -0.66
TUBB1-201ENST00000217133 METTL24Q5JXM2 366 aa10.92□□□□□ -0.66
TUBB1-201ENST00000217133 STAMQ92783 540 aa10.92□□□□□ -0.66
TUBB1-201ENST00000217133 INCENPQ9NQS7 918 aa10.92□□□□□ -0.66
TUBB1-201ENST00000217133 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.92□□□□□ -0.66
TUBB1-201ENST00000217133 TRIM75PA6NK02 468 aa10.92□□□□□ -0.66
TUBB1-201ENST00000217133 SART3Q15020 963 aaKnown RBP10.92□□□□□ -0.66
TUBB1-201ENST00000217133 RRAGBQ5VZM2 374 aa10.92□□□□□ -0.66
TUBB1-201ENST00000217133 ZNF579Q8NAF0 562 aaKnown RBP10.92□□□□□ -0.66
TUBB1-201ENST00000217133 NAPBQ9H115 298 aa10.92□□□□□ -0.66
TUBB1-201ENST00000217133 LY9Q9HBG7 655 aa10.92□□□□□ -0.66
TUBB1-201ENST00000217133 TAB2Q9NYJ8 693 aa10.92□□□□□ -0.66
TUBB1-201ENST00000217133 MAP3K15Q6ZN16 1313 aa10.91□□□□□ -0.66
TUBB1-201ENST00000217133 ZMYND10O75800 440 aa10.91□□□□□ -0.66
TUBB1-201ENST00000217133 CD44P16070 742 aaKnown RBP10.91□□□□□ -0.66
TUBB1-201ENST00000217133 IFNAR1P17181 557 aa10.91□□□□□ -0.66
TUBB1-201ENST00000217133 ERVK-24P63145 666 aa10.91□□□□□ -0.66
TUBB1-201ENST00000217133 CCDC70Q6NSX1 233 aa10.91□□□□□ -0.66
TUBB1-201ENST00000217133 WDR93Q6P2C0 686 aa10.91□□□□□ -0.66
TUBB1-201ENST00000217133 CMTR1Q8N1G2 835 aaKnown RBP10.91□□□□□ -0.66
TUBB1-201ENST00000217133 FAM76AQ8TAV0 307 aa10.91□□□□□ -0.66
TUBB1-201ENST00000217133 IGDCC4Q8TDY8 1250 aa10.91□□□□□ -0.66
TUBB1-201ENST00000217133 RIN2Q8WYP3 895 aaPredicted RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms