RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 KMT5BQ4FZB7 885 aa15.46■□□□□ 0.07
SIX4-201ENST00000216513 OTUD6AQ7L8S5 288 aa15.46■□□□□ 0.07
SIX4-201ENST00000216513 CCDC65Q8IXS2 484 aa15.46■□□□□ 0.07
SIX4-201ENST00000216513 USP44Q9H0E7 712 aa15.46■□□□□ 0.07
SIX4-201ENST00000216513 ELP3Q9H9T3 547 aa15.46■□□□□ 0.07
SIX4-201ENST00000216513 NCOA5Q9HCD5 579 aaKnown RBP15.46■□□□□ 0.07
SIX4-201ENST00000216513 TET3O43151 1660 aa15.46■□□□□ 0.07
SIX4-201ENST00000216513 GSTTP1A0A1W2PQM5 241 aa15.46■□□□□ 0.07
SIX4-201ENST00000216513 SMCO2A6NFE2 343 aa15.46■□□□□ 0.07
SIX4-201ENST00000216513 GPSM2P81274 684 aa15.46■□□□□ 0.07
SIX4-201ENST00000216513 CEP83Q9Y592 693 aa15.46■□□□□ 0.07
SIX4-201ENST00000216513 ALKQ9UM73 1620 aa15.46■□□□□ 0.07
SIX4-201ENST00000216513 AK2P54819 239 aa15.46■□□□□ 0.07
SIX4-201ENST00000216513 PRR16Q569H4 304 aa15.46■□□□□ 0.07
SIX4-201ENST00000216513 FAM102BQ5T8I3 360 aa15.46■□□□□ 0.07
SIX4-201ENST00000216513 GOLGA1Q92805 767 aa15.46■□□□□ 0.07
SIX4-201ENST00000216513 PHKBQ93100 1093 aa15.46■□□□□ 0.07
SIX4-201ENST00000216513 FRMD4BQ9Y2L6 1034 aa15.46■□□□□ 0.07
SIX4-201ENST00000216513 CPSF1Q10570 1443 aaKnown RBP15.46■□□□□ 0.07
SIX4-201ENST00000216513 CCDC172P0C7W6 258 aa15.46■□□□□ 0.06
SIX4-201ENST00000216513 HUNKP57058 714 aa15.46■□□□□ 0.06
SIX4-201ENST00000216513 SPECC1Q5M775 1068 aa15.46■□□□□ 0.06
SIX4-201ENST00000216513 ZBTB33Q86T24 672 aa15.46■□□□□ 0.06
SIX4-201ENST00000216513 LINC00116Q8NCU8 138 aa15.46■□□□□ 0.06
SIX4-201ENST00000216513 DEPTORQ8TB45 409 aa15.46■□□□□ 0.06
SIX4-201ENST00000216513 SLC27A2O14975 620 aa15.45■□□□□ 0.06
SIX4-201ENST00000216513 WDR44Q5JSH3 913 aa15.45■□□□□ 0.06
SIX4-201ENST00000216513 BARGINQ6ZT62 677 aa15.45■□□□□ 0.06
SIX4-201ENST00000216513 ZSCAN10Q96SZ4 725 aaPredicted RBP15.45■□□□□ 0.06
SIX4-201ENST00000216513 KCNG4Q8TDN1 519 aa15.45■□□□□ 0.06
SIX4-201ENST00000216513 MTFR1LQ9H019 292 aa15.45■□□□□ 0.06
SIX4-201ENST00000216513 SERPINB13Q9UIV8 391 aa15.45■□□□□ 0.06
SIX4-201ENST00000216513 PSMA7O14818 248 aa15.45■□□□□ 0.06
SIX4-201ENST00000216513 EEF2P13639 858 aaKnown RBP15.45■□□□□ 0.06
SIX4-201ENST00000216513 TMOD1P28289 359 aa15.45■□□□□ 0.06
SIX4-201ENST00000216513 CALCRLQ16602 461 aa15.45■□□□□ 0.06
SIX4-201ENST00000216513 RETREG2Q8NC44 543 aa15.45■□□□□ 0.06
SIX4-201ENST00000216513 AKT3Q9Y243 479 aa15.45■□□□□ 0.06
SIX4-201ENST00000216513 ABCA9Q8IUA7 1624 aa15.45■□□□□ 0.06
SIX4-201ENST00000216513 ADCY9O60503 1353 aa15.45■□□□□ 0.06
SIX4-201ENST00000216513 IQSEC2Q5JU85 1478 aa15.45■□□□□ 0.06
SIX4-201ENST00000216513 HOOK3Q86VS8 718 aa15.45■□□□□ 0.06
SIX4-201ENST00000216513 PNMA1Q8ND90 353 aa15.45■□□□□ 0.06
SIX4-201ENST00000216513 CELF1Q92879 486 aaKnown RBP15.45■□□□□ 0.06
SIX4-201ENST00000216513 CCDC17Q96LX7 622 aa15.45■□□□□ 0.06
SIX4-201ENST00000216513 SERPINA10Q9UK55 444 aa15.45■□□□□ 0.06
SIX4-201ENST00000216513 SLC16A2P36021 539 aa15.44■□□□□ 0.06
SIX4-201ENST00000216513 RNASELQ05823 741 aaKnown RBP15.44■□□□□ 0.06
SIX4-201ENST00000216513 ANO6Q4KMQ2 910 aa15.44■□□□□ 0.06
SIX4-201ENST00000216513 REXO1Q8N1G1 1221 aaKnown RBP15.44■□□□□ 0.06
SIX4-201ENST00000216513 DHX36Q9H2U1 1008 aaKnown RBP15.44■□□□□ 0.06
SIX4-201ENST00000216513 CTAGE5O15320 804 aa15.44■□□□□ 0.06
SIX4-201ENST00000216513 ATP5JP18859 108 aa15.44■□□□□ 0.06
SIX4-201ENST00000216513 LRRC45Q96CN5 670 aa15.44■□□□□ 0.06
SIX4-201ENST00000216513 N4BP3O15049 544 aa15.44■□□□□ 0.06
SIX4-201ENST00000216513 IFRD2Q12894 506 aaPredicted RBP15.44■□□□□ 0.06
SIX4-201ENST00000216513 MYCT1Q8N699 235 aa15.44■□□□□ 0.06
SIX4-201ENST00000216513 EXOC7Q9UPT5 735 aa15.44■□□□□ 0.06
SIX4-201ENST00000216513 TMEM110-MUSTN1A8MSY1 372 aa15.44■□□□□ 0.06
SIX4-201ENST00000216513 ACTN2P35609 894 aa15.44■□□□□ 0.06
SIX4-201ENST00000216513 PPP1R16BQ96T49 567 aa15.44■□□□□ 0.06
SIX4-201ENST00000216513 KLRF2D3W0D1 207 aa15.43■□□□□ 0.06
SIX4-201ENST00000216513 TAF1CQ15572 869 aaPredicted RBP15.43■□□□□ 0.06
SIX4-201ENST00000216513 FAM173BQ6P4H8 233 aa15.43■□□□□ 0.06
SIX4-201ENST00000216513 PDCL2Q8N4E4 241 aa15.43■□□□□ 0.06
SIX4-201ENST00000216513 SNX29Q8TEQ0 813 aa15.43■□□□□ 0.06
SIX4-201ENST00000216513 DNAJC25Q9H1X3 360 aa15.43■□□□□ 0.06
SIX4-201ENST00000216513 CWC15Q9P013 229 aaKnown RBP15.43■□□□□ 0.06
SIX4-201ENST00000216513 TBC1D7Q9P0N9 293 aa15.43■□□□□ 0.06
SIX4-201ENST00000216513 ZNRF3Q9ULT6 936 aa15.43■□□□□ 0.06
SIX4-201ENST00000216513 FAM160B1Q5W0V3 765 aa15.43■□□□□ 0.06
SIX4-201ENST00000216513 KRT25Q7Z3Z0 450 aa15.43■□□□□ 0.06
SIX4-201ENST00000216513 PODNQ7Z5L7 613 aa15.43■□□□□ 0.06
SIX4-201ENST00000216513 CDC42BPAQ5VT25 1732 aa15.43■□□□□ 0.06
SIX4-201ENST00000216513 TECPR2O15040 1411 aa15.43■□□□□ 0.06
SIX4-201ENST00000216513 KIF24Q5T7B8 1368 aa15.43■□□□□ 0.06
SIX4-201ENST00000216513 SLC16A10Q8TF71 515 aa15.43■□□□□ 0.06
SIX4-201ENST00000216513 DNM3Q9UQ16 869 aa15.43■□□□□ 0.06
SIX4-201ENST00000216513 SPATA31E1Q6ZUB1 1445 aa15.43■□□□□ 0.06
SIX4-201ENST00000216513 MSANTD4Q8NCY6 345 aa15.43■□□□□ 0.06
SIX4-201ENST00000216513 TBC1D32Q96NH3 1257 aa15.43■□□□□ 0.06
SIX4-201ENST00000216513 FAM107BQ9H098 131 aa15.43■□□□□ 0.06
SIX4-201ENST00000216513 RRAGCQ9HB90 399 aa15.43■□□□□ 0.06
SIX4-201ENST00000216513 CEP152O94986 1710 aa15.43■□□□□ 0.06
SIX4-201ENST00000216513 XKR9Q5GH70 373 aa15.42■□□□□ 0.06
SIX4-201ENST00000216513 SEC62Q99442 399 aaKnown RBP15.42■□□□□ 0.06
SIX4-201ENST00000216513 ATP10DQ9P241 1426 aa15.42■□□□□ 0.06
SIX4-201ENST00000216513 NPC1L1Q9UHC9 1359 aa15.42■□□□□ 0.06
SIX4-201ENST00000216513 SSH2Q76I76 1423 aa15.42■□□□□ 0.06
SIX4-201ENST00000216513 TNPO2O14787 897 aaKnown RBP15.42■□□□□ 0.06
SIX4-201ENST00000216513 TTLL1O95922 423 aa15.42■□□□□ 0.06
SIX4-201ENST00000216513 MECOMQ03112 1051 aa15.42■□□□□ 0.06
SIX4-201ENST00000216513 UBXN4Q92575 508 aa15.42■□□□□ 0.06
SIX4-201ENST00000216513 VPS54Q9P1Q0 977 aa15.42■□□□□ 0.06
SIX4-201ENST00000216513 SPTLC2O15270 562 aa15.42■□□□□ 0.06
SIX4-201ENST00000216513 USO1O60763 962 aaKnown RBP15.42■□□□□ 0.06
SIX4-201ENST00000216513 PRPF6O94906 941 aaKnown RBP15.42■□□□□ 0.06
SIX4-201ENST00000216513 SNAP25P60880 206 aa15.42■□□□□ 0.06
SIX4-201ENST00000216513 PRAMEF18Q5VWM3 479 aa15.42■□□□□ 0.06
SIX4-201ENST00000216513 RPS6KC1Q96S38 1066 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms