RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 FAM8A1Q9UBU6 413 aa5.41□□□□□ -1.54
CDKN3-201ENST00000216414 NUAK1O60285 661 aa5.4□□□□□ -1.54
CDKN3-201ENST00000216414 HOXA5P20719 270 aa5.4□□□□□ -1.54
CDKN3-201ENST00000216414 FMR1Q06787 632 aaKnown RBP eCLIP5.4□□□□□ -1.54
CDKN3-201ENST00000216414 TMPRSS7Q7RTY8 843 aa5.4□□□□□ -1.54
CDKN3-201ENST00000216414 ZSCAN29Q8IWY8 852 aaPredicted RBP5.4□□□□□ -1.54
CDKN3-201ENST00000216414 SMG5Q9UPR3 1016 aaKnown RBP5.4□□□□□ -1.54
CDKN3-201ENST00000216414 WASH4PA8MWX3 477 aa5.39□□□□□ -1.55
CDKN3-201ENST00000216414 ESR1P03372 595 aa5.39□□□□□ -1.55
CDKN3-201ENST00000216414 MED14OSP0DP75 135 aa5.39□□□□□ -1.55
CDKN3-201ENST00000216414 GLDCP23378 1020 aa5.39□□□□□ -1.55
CDKN3-201ENST00000216414 TPP2P29144 1249 aaPredicted RBP5.39□□□□□ -1.55
CDKN3-201ENST00000216414 SEPT6Q14141 434 aa5.39□□□□□ -1.55
CDKN3-201ENST00000216414 SV2BQ7L1I2 683 aa5.39□□□□□ -1.55
CDKN3-201ENST00000216414 SLC26A8Q96RN1 970 aa5.39□□□□□ -1.55
CDKN3-201ENST00000216414 ADAMTS10Q9H324 1103 aa5.39□□□□□ -1.55
CDKN3-201ENST00000216414 HPXP02790 462 aa5.38□□□□□ -1.55
CDKN3-201ENST00000216414 PGRP06401 933 aa5.38□□□□□ -1.55
CDKN3-201ENST00000216414 TRHRP34981 398 aaPredicted RBP5.38□□□□□ -1.55
CDKN3-201ENST00000216414 ETV3P41162 512 aa5.38□□□□□ -1.55
CDKN3-201ENST00000216414 LINC00310P59036 64 aa5.38□□□□□ -1.55
CDKN3-201ENST00000216414 PIWIL2Q8TC59 973 aaKnown RBP5.38□□□□□ -1.55
CDKN3-201ENST00000216414 C20orf173Q96LM9 149 aa5.38□□□□□ -1.55
CDKN3-201ENST00000216414 TJP2Q9UDY2 1190 aa5.38□□□□□ -1.55
CDKN3-201ENST00000216414 GNEQ9Y223 722 aaKnown RBP5.38□□□□□ -1.55
CDKN3-201ENST00000216414 TMEM87BQ96K49 555 aa5.37□□□□□ -1.55
CDKN3-201ENST00000216414 Q96M66 194 aa5.37□□□□□ -1.55
CDKN3-201ENST00000216414 RNF32Q9H0A6 362 aa5.37□□□□□ -1.55
CDKN3-201ENST00000216414 IRF2BPLQ9H1B7 796 aa5.37□□□□□ -1.55
CDKN3-201ENST00000216414 TRIT1Q9H3H1 467 aaKnown RBP5.37□□□□□ -1.55
CDKN3-201ENST00000216414 PARD6AQ9NPB6 346 aa5.37□□□□□ -1.55
CDKN3-201ENST00000216414 PCDHB5Q9Y5E4 795 aa5.37□□□□□ -1.55
CDKN3-201ENST00000216414 CCDC85BQ15834 202 aaPredicted RBP5.36□□□□□ -1.55
CDKN3-201ENST00000216414 MAP3K11Q16584 847 aa5.36□□□□□ -1.55
CDKN3-201ENST00000216414 MRPL41Q8IXM3 137 aaKnown RBP5.36□□□□□ -1.55
CDKN3-201ENST00000216414 ASB16Q96NS5 453 aa5.36□□□□□ -1.55
CDKN3-201ENST00000216414 ZCCHC4Q9H5U6 513 aa5.36□□□□□ -1.55
CDKN3-201ENST00000216414 C19orf44Q9H6X5 657 aa5.36□□□□□ -1.55
CDKN3-201ENST00000216414 DUSP13Q9UII6 198 aa5.36□□□□□ -1.55
CDKN3-201ENST00000216414 GFRA2O00451 464 aa5.35□□□□□ -1.55
CDKN3-201ENST00000216414 FOXD2O60548 495 aaPredicted RBP5.35□□□□□ -1.55
CDKN3-201ENST00000216414 RPS26P62854 115 aaKnown RBP5.35□□□□□ -1.55
CDKN3-201ENST00000216414 EGR3Q06889 387 aa5.35□□□□□ -1.55
CDKN3-201ENST00000216414 SLC6A19Q695T7 634 aa5.35□□□□□ -1.55
CDKN3-201ENST00000216414 ZNF605Q86T29 641 aa5.35□□□□□ -1.55
CDKN3-201ENST00000216414 DUSP15Q9H1R2 295 aaPredicted RBP5.35□□□□□ -1.55
CDKN3-201ENST00000216414 GPATCH2Q9NW75 528 aa5.35□□□□□ -1.55
CDKN3-201ENST00000216414 BRD1O95696 1058 aa5.34□□□□□ -1.55
CDKN3-201ENST00000216414 LDHBP07195 334 aaKnown RBP5.34□□□□□ -1.55
CDKN3-201ENST00000216414 SYN1P17600 705 aa5.34□□□□□ -1.55
CDKN3-201ENST00000216414 EIF4BP23588 611 aaKnown RBP5.34□□□□□ -1.55
CDKN3-201ENST00000216414 LTKP29376 864 aa5.34□□□□□ -1.55
CDKN3-201ENST00000216414 PDE4BQ07343 736 aa5.34□□□□□ -1.55
CDKN3-201ENST00000216414 LILRA2Q8N149 483 aa5.34□□□□□ -1.55
CDKN3-201ENST00000216414 OXR1Q8N573 874 aa5.34□□□□□ -1.55
CDKN3-201ENST00000216414 PDZD8Q8NEN9 1154 aa5.34□□□□□ -1.55
CDKN3-201ENST00000216414 SYTL4Q96C24 671 aaPredicted RBP5.34□□□□□ -1.55
CDKN3-201ENST00000216414 SLC6A17Q9H1V8 727 aa5.34□□□□□ -1.55
CDKN3-201ENST00000216414 TACC3Q9Y6A5 838 aa5.34□□□□□ -1.55
CDKN3-201ENST00000216414 P4HBP07237 508 aaKnown RBP5.33□□□□□ -1.56
CDKN3-201ENST00000216414 ZGLP1P0C6A0 271 aa5.33□□□□□ -1.56
CDKN3-201ENST00000216414 SRFP11831 508 aa5.33□□□□□ -1.56
CDKN3-201ENST00000216414 BMP7P18075 431 aa5.33□□□□□ -1.56
CDKN3-201ENST00000216414 GAB4Q2WGN9 574 aa5.33□□□□□ -1.56
CDKN3-201ENST00000216414 TMEM132EQ6IEE7 984 aa5.33□□□□□ -1.56
CDKN3-201ENST00000216414 DNAJB8Q8NHS0 232 aa5.33□□□□□ -1.56
CDKN3-201ENST00000216414 MCOLN1Q9GZU1 580 aa5.33□□□□□ -1.56
CDKN3-201ENST00000216414 MIR1-1HGQ9H1L0 117 aa5.33□□□□□ -1.56
CDKN3-201ENST00000216414 KCNH3Q9ULD8 1083 aa5.33□□□□□ -1.56
CDKN3-201ENST00000216414 CEP131Q9UPN4 1083 aa5.33□□□□□ -1.56
CDKN3-201ENST00000216414 FITM1A5D6W6 292 aa5.32□□□□□ -1.56
CDKN3-201ENST00000216414 LIG3P49916 1009 aa5.32□□□□□ -1.56
CDKN3-201ENST00000216414 DLG4P78352 724 aa5.32□□□□□ -1.56
CDKN3-201ENST00000216414 TIGD5Q53EQ6 642 aa5.32□□□□□ -1.56
CDKN3-201ENST00000216414 AGMOQ6ZNB7 445 aa5.32□□□□□ -1.56
CDKN3-201ENST00000216414 TSPYL5Q86VY4 417 aaPredicted RBP5.32□□□□□ -1.56
CDKN3-201ENST00000216414 IRF2BP1Q8IU81 584 aa5.32□□□□□ -1.56
CDKN3-201ENST00000216414 MCATQ8IVS2 390 aaKnown RBP5.32□□□□□ -1.56
CDKN3-201ENST00000216414 DTWD2Q8NBA8 298 aa5.32□□□□□ -1.56
CDKN3-201ENST00000216414 DHX38Q92620 1227 aaKnown RBP5.32□□□□□ -1.56
CDKN3-201ENST00000216414 JARID2Q92833 1246 aaPredicted RBP5.32□□□□□ -1.56
CDKN3-201ENST00000216414 ACSF2Q96CM8 615 aaPredicted RBP5.32□□□□□ -1.56
CDKN3-201ENST00000216414 FRMD6Q96NE9 622 aa5.32□□□□□ -1.56
CDKN3-201ENST00000216414 GPR62Q9BZJ7 368 aa5.32□□□□□ -1.56
CDKN3-201ENST00000216414 SP110Q9HB58 689 aa5.32□□□□□ -1.56
CDKN3-201ENST00000216414 PDE6BP35913 854 aa5.31□□□□□ -1.56
CDKN3-201ENST00000216414 TSNAXIP1Q2TAA8 658 aa5.31□□□□□ -1.56
CDKN3-201ENST00000216414 BORCS6Q96GS4 357 aa5.31□□□□□ -1.56
CDKN3-201ENST00000216414 INTS4Q96HW7 963 aaKnown RBP5.31□□□□□ -1.56
CDKN3-201ENST00000216414 CWC22Q9HCG8 908 aaKnown RBP5.31□□□□□ -1.56
CDKN3-201ENST00000216414 GPR160Q9UJ42 338 aa5.31□□□□□ -1.56
CDKN3-201ENST00000216414 ADAM30Q9UKF2 790 aa5.31□□□□□ -1.56
CDKN3-201ENST00000216414 CNOT6Q9ULM6 557 aaKnown RBP5.31□□□□□ -1.56
CDKN3-201ENST00000216414 PCDHA11Q9Y5I1 949 aa5.31□□□□□ -1.56
CDKN3-201ENST00000216414 MYOCOSA0A1B0GUC4 107 aa5.3□□□□□ -1.56
CDKN3-201ENST00000216414 SEMA7AO75326 666 aa5.3□□□□□ -1.56
CDKN3-201ENST00000216414 PLCG1P19174 1290 aa5.3□□□□□ -1.56
CDKN3-201ENST00000216414 GNA15P30679 374 aa5.3□□□□□ -1.56
CDKN3-201ENST00000216414 RPL6Q02878 288 aaKnown RBP5.3□□□□□ -1.56
CDKN3-201ENST00000216414 NFIXQ14938 502 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms