RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 C7orf61Q8IZ16 206 aa23.93■■□□□ 1.42
SYNGR1-201ENST00000216155 NBPF3Q9H094 633 aa23.93■■□□□ 1.42
SYNGR1-201ENST00000216155 VCAM1P19320 739 aa23.92■■□□□ 1.42
SYNGR1-201ENST00000216155 RGS2P41220 211 aa23.92■■□□□ 1.42
SYNGR1-201ENST00000216155 CCL14Q16627 93 aa23.92■■□□□ 1.42
SYNGR1-201ENST00000216155 ABCB5Q2M3G0 1257 aa23.92■■□□□ 1.42
SYNGR1-201ENST00000216155 PLEKHH3Q7Z736 793 aa23.92■■□□□ 1.42
SYNGR1-201ENST00000216155 CCAR1Q8IX12 1150 aaKnown RBP23.92■■□□□ 1.42
SYNGR1-201ENST00000216155 RHPN1Q8TCX5 695 aa23.92■■□□□ 1.42
SYNGR1-201ENST00000216155 ACER1Q8TDN7 264 aa23.92■■□□□ 1.42
SYNGR1-201ENST00000216155 APBA2Q99767 749 aa23.92■■□□□ 1.42
SYNGR1-201ENST00000216155 KIAA1683Q9H0B3 1180 aa23.92■■□□□ 1.42
SYNGR1-201ENST00000216155 C11orf49Q9H6J7 331 aa23.92■■□□□ 1.42
SYNGR1-201ENST00000216155 STAP2Q9UGK3 403 aa23.92■■□□□ 1.42
SYNGR1-201ENST00000216155 USP17L15C9J2P7 530 aa23.91■■□□□ 1.42
SYNGR1-201ENST00000216155 USP17L13C9JLJ4 530 aa23.91■■□□□ 1.42
SYNGR1-201ENST00000216155 USP17L11C9JVI0 530 aa23.91■■□□□ 1.42
SYNGR1-201ENST00000216155 USP17L18D6R9N7 530 aa23.91■■□□□ 1.42
SYNGR1-201ENST00000216155 USP17L22D6RA61 530 aa23.91■■□□□ 1.42
SYNGR1-201ENST00000216155 USP17L17D6RBQ6 530 aa23.91■■□□□ 1.42
SYNGR1-201ENST00000216155 USP17L19D6RCP7 530 aa23.91■■□□□ 1.42
SYNGR1-201ENST00000216155 USP17L20D6RJB6 530 aa23.91■■□□□ 1.42
SYNGR1-201ENST00000216155 USP14P54578 494 aa23.91■■□□□ 1.42
SYNGR1-201ENST00000216155 CACNB2Q08289 660 aaPredicted RBP23.91■■□□□ 1.42
SYNGR1-201ENST00000216155 USP17L24Q0WX57 530 aa23.91■■□□□ 1.42
SYNGR1-201ENST00000216155 HSP90AB4PQ58FF6 505 aa23.91■■□□□ 1.42
SYNGR1-201ENST00000216155 TRMT44Q8IYL2 757 aaKnown RBP23.91■■□□□ 1.42
SYNGR1-201ENST00000216155 RABGAP1Q9Y3P9 1069 aa23.91■■□□□ 1.42
SYNGR1-201ENST00000216155 FRMPD3Q5JV73 1810 aa23.91■■□□□ 1.42
SYNGR1-201ENST00000216155 PFASO15067 1338 aa23.9■■□□□ 1.42
SYNGR1-201ENST00000216155 MAGEB6P1A0A0J9YX57 407 aa23.9■■□□□ 1.42
SYNGR1-201ENST00000216155 PDE6AP16499 860 aa23.9■■□□□ 1.42
SYNGR1-201ENST00000216155 GUCY1A2P33402 732 aa23.9■■□□□ 1.42
SYNGR1-201ENST00000216155 EVX2Q03828 476 aa23.9■■□□□ 1.42
SYNGR1-201ENST00000216155 GABPAQ06546 454 aa23.9■■□□□ 1.42
SYNGR1-201ENST00000216155 TTF1Q15361 905 aaPredicted RBP23.9■■□□□ 1.42
SYNGR1-201ENST00000216155 CATSPERGQ6ZRH7 1159 aa23.9■■□□□ 1.42
SYNGR1-201ENST00000216155 ZMYND8Q9ULU4 1186 aaPredicted RBP23.9■■□□□ 1.42
SYNGR1-201ENST00000216155 SOX1O00570 391 aaPredicted RBP23.89■■□□□ 1.41
SYNGR1-201ENST00000216155 CCND3P30281 292 aaPredicted RBP23.89■■□□□ 1.41
SYNGR1-201ENST00000216155 POLR3DP05423 398 aaPredicted RBP23.88■■□□□ 1.41
SYNGR1-201ENST00000216155 MAP2K5Q13163 448 aa23.88■■□□□ 1.41
SYNGR1-201ENST00000216155 SLC9C2Q5TAH2 1124 aa23.88■■□□□ 1.41
SYNGR1-201ENST00000216155 GDF15Q99988 308 aa23.88■■□□□ 1.41
SYNGR1-201ENST00000216155 CWC22Q9HCG8 908 aaKnown RBP23.88■■□□□ 1.41
SYNGR1-201ENST00000216155 CABP5Q9NP86 173 aa23.88■■□□□ 1.41
SYNGR1-201ENST00000216155 ZNF532Q9HCE3 1301 aa23.87■■□□□ 1.41
SYNGR1-201ENST00000216155 TCRBV5S4A2TA0A5A2 114 aa23.87■■□□□ 1.41
SYNGR1-201ENST00000216155 SPDYE16A6NNV3 312 aaPredicted RBP23.87■■□□□ 1.41
SYNGR1-201ENST00000216155 CCNA1P78396 465 aa23.87■■□□□ 1.41
SYNGR1-201ENST00000216155 SEPT2Q15019 361 aa23.87■■□□□ 1.41
SYNGR1-201ENST00000216155 LBX2Q6XYB7 198 aa23.87■■□□□ 1.41
SYNGR1-201ENST00000216155 CLASRPQ8N2M8 674 aaKnown RBP23.87■■□□□ 1.41
SYNGR1-201ENST00000216155 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.87■■□□□ 1.41
SYNGR1-201ENST00000216155 KIF1BPQ96EK5 621 aa23.87■■□□□ 1.41
SYNGR1-201ENST00000216155 DNAJC2Q99543 621 aaKnown RBP23.87■■□□□ 1.41
SYNGR1-201ENST00000216155 CRNKL1Q9BZJ0 848 aaKnown RBP23.87■■□□□ 1.41
SYNGR1-201ENST00000216155 RPAP3Q9H6T3 665 aaPredicted RBP23.87■■□□□ 1.41
SYNGR1-201ENST00000216155 BTBD7Q9P203 1132 aa23.87■■□□□ 1.41
SYNGR1-201ENST00000216155 APBB1O00213 710 aa23.86■■□□□ 1.41
SYNGR1-201ENST00000216155 GOLIM4O00461 696 aa23.86■■□□□ 1.41
SYNGR1-201ENST00000216155 LHX8Q68G74 356 aa23.86■■□□□ 1.41
SYNGR1-201ENST00000216155 LCORLQ8N3X6 602 aa23.86■■□□□ 1.41
SYNGR1-201ENST00000216155 SDR42E1Q8WUS8 393 aa23.86■■□□□ 1.41
SYNGR1-201ENST00000216155 LRCH3Q96II8 777 aa23.86■■□□□ 1.41
SYNGR1-201ENST00000216155 MCM9Q9NXL9 1143 aa23.86■■□□□ 1.41
SYNGR1-201ENST00000216155 A0A0G2JMZ2 1700 aa23.86■■□□□ 1.41
SYNGR1-201ENST00000216155 COL6A1P12109 1028 aa23.85■■□□□ 1.41
SYNGR1-201ENST00000216155 SYN1P17600 705 aa23.85■■□□□ 1.41
SYNGR1-201ENST00000216155 BMP8BP34820 402 aa23.85■■□□□ 1.41
SYNGR1-201ENST00000216155 SIRT2Q8IXJ6 389 aa23.85■■□□□ 1.41
SYNGR1-201ENST00000216155 EDC3Q96F86 508 aaKnown RBP23.85■■□□□ 1.41
SYNGR1-201ENST00000216155 DCP1AQ9NPI6 582 aaPredicted RBP23.85■■□□□ 1.41
SYNGR1-201ENST00000216155 FLRT1Q9NZU1 646 aa23.85■■□□□ 1.41
SYNGR1-201ENST00000216155 A0A1W2PRG0 241 aa23.84■■□□□ 1.41
SYNGR1-201ENST00000216155 GLRX3O76003 335 aaKnown RBP23.84■■□□□ 1.41
SYNGR1-201ENST00000216155 PTPREP23469 700 aa23.84■■□□□ 1.41
SYNGR1-201ENST00000216155 GRB14Q14449 540 aa23.84■■□□□ 1.41
SYNGR1-201ENST00000216155 WDR78Q5VTH9 848 aa23.84■■□□□ 1.41
SYNGR1-201ENST00000216155 RLFQ13129 1914 aa23.84■■□□□ 1.41
SYNGR1-201ENST00000216155 COL6A3P12111 3177 aa23.83■■□□□ 1.41
SYNGR1-201ENST00000216155 MYH8P13535 1937 aa23.83■■□□□ 1.41
SYNGR1-201ENST00000216155 ZNF236Q9UL36 1845 aa23.83■■□□□ 1.41
SYNGR1-201ENST00000216155 SLC15A5A6NIM6 579 aa23.83■■□□□ 1.41
SYNGR1-201ENST00000216155 IFIT2P09913 472 aaKnown RBP23.83■■□□□ 1.41
SYNGR1-201ENST00000216155 CYP2D6P10635 497 aa23.83■■□□□ 1.41
SYNGR1-201ENST00000216155 RPAP2Q8IXW5 612 aaPredicted RBP23.83■■□□□ 1.41
SYNGR1-201ENST00000216155 SLC44A5Q8NCS7 719 aa23.83■■□□□ 1.41
SYNGR1-201ENST00000216155 MPHOSPH10O00566 681 aaKnown RBP23.82■■□□□ 1.4
SYNGR1-201ENST00000216155 HMMRO75330 724 aa23.82■■□□□ 1.4
SYNGR1-201ENST00000216155 MS4A1P11836 297 aa23.82■■□□□ 1.4
SYNGR1-201ENST00000216155 MAGEA10P43363 369 aaPredicted RBP23.82■■□□□ 1.4
SYNGR1-201ENST00000216155 DIEXFQ68CQ4 756 aaKnown RBP23.82■■□□□ 1.4
SYNGR1-201ENST00000216155 ZBTB40Q9NUA8 1239 aa23.82■■□□□ 1.4
SYNGR1-201ENST00000216155 DDX19BQ9UMR2 479 aa23.82■■□□□ 1.4
SYNGR1-201ENST00000216155 COG6Q9Y2V7 657 aa23.82■■□□□ 1.4
SYNGR1-201ENST00000216155 BAZ2AQ9UIF9 1905 aaKnown RBP23.81■■□□□ 1.4
SYNGR1-201ENST00000216155 HOXC6P09630 235 aa23.81■■□□□ 1.4
SYNGR1-201ENST00000216155 SLFNL1Q499Z3 407 aa23.81■■□□□ 1.4
SYNGR1-201ENST00000216155 MFSD14CQ5VZR4 134 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms