RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 TDO2P48775 406 aa12.28□□□□□ -0.44
APOBEC3D-201ENST00000216099 RCAN1P53805 252 aa12.28□□□□□ -0.44
APOBEC3D-201ENST00000216099 NFIXQ14938 502 aa12.28□□□□□ -0.44
APOBEC3D-201ENST00000216099 APOA5Q6Q788 366 aa12.28□□□□□ -0.44
APOBEC3D-201ENST00000216099 PDLIM2Q96JY6 352 aa12.28□□□□□ -0.44
APOBEC3D-201ENST00000216099 LY9Q9HBG7 655 aa12.28□□□□□ -0.44
APOBEC3D-201ENST00000216099 RAI14Q9P0K7 980 aa12.28□□□□□ -0.44
APOBEC3D-201ENST00000216099 RCOR1Q9UKL0 485 aa12.28□□□□□ -0.44
APOBEC3D-201ENST00000216099 NOVA2Q9UNW9 492 aaKnown RBP12.28□□□□□ -0.44
APOBEC3D-201ENST00000216099 ANKRD31Q8N7Z5 1873 aa12.28□□□□□ -0.44
APOBEC3D-201ENST00000216099 HIBADHP31937 336 aaKnown RBP12.28□□□□□ -0.44
APOBEC3D-201ENST00000216099 GRAPQ13588 217 aa12.28□□□□□ -0.44
APOBEC3D-201ENST00000216099 CRTC2Q53ET0 693 aaPredicted RBP12.28□□□□□ -0.44
APOBEC3D-201ENST00000216099 MFSD6Q6ZSS7 791 aa12.28□□□□□ -0.44
APOBEC3D-201ENST00000216099 GRAPLQ8TC17 118 aaPredicted RBP12.28□□□□□ -0.44
APOBEC3D-201ENST00000216099 JDP2Q8WYK2 163 aa12.28□□□□□ -0.44
APOBEC3D-201ENST00000216099 RIOK1Q9BRS2 568 aaKnown RBP12.28□□□□□ -0.44
APOBEC3D-201ENST00000216099 FUCA2Q9BTY2 467 aa12.28□□□□□ -0.44
APOBEC3D-201ENST00000216099 BRIP1Q9BX63 1249 aa12.28□□□□□ -0.44
APOBEC3D-201ENST00000216099 LRRC4BQ9NT99 713 aa12.28□□□□□ -0.44
APOBEC3D-201ENST00000216099 DDX19AQ9NUU7 478 aaKnown RBP12.28□□□□□ -0.44
APOBEC3D-201ENST00000216099 ORC3Q9UBD5 711 aaPredicted RBP12.28□□□□□ -0.44
APOBEC3D-201ENST00000216099 RGPD3A6NKT7 1758 aaPredicted RBP12.27□□□□□ -0.45
APOBEC3D-201ENST00000216099 RGPD4Q7Z3J3 1758 aa12.27□□□□□ -0.45
APOBEC3D-201ENST00000216099 CPLX1O14810 134 aa12.27□□□□□ -0.45
APOBEC3D-201ENST00000216099 PRKAB2O43741 272 aa12.27□□□□□ -0.45
APOBEC3D-201ENST00000216099 PCP11498 1178 aaKnown RBP12.27□□□□□ -0.45
APOBEC3D-201ENST00000216099 CPLX2Q6PUV4 134 aaKnown RBP12.27□□□□□ -0.45
APOBEC3D-201ENST00000216099 C15orf52Q6ZUT6 534 aaKnown RBP12.27□□□□□ -0.45
APOBEC3D-201ENST00000216099 DEPDC4Q8N2C3 294 aa12.27□□□□□ -0.45
APOBEC3D-201ENST00000216099 LEMD3Q9Y2U8 911 aa12.27□□□□□ -0.45
APOBEC3D-201ENST00000216099 STK36Q9NRP7 1315 aa12.27□□□□□ -0.45
APOBEC3D-201ENST00000216099 ABL1P00519 1130 aa12.27□□□□□ -0.45
APOBEC3D-201ENST00000216099 METAP2P50579 478 aaKnown RBP eCLIP12.27□□□□□ -0.45
APOBEC3D-201ENST00000216099 CTDSPL2Q05D32 466 aa12.27□□□□□ -0.45
APOBEC3D-201ENST00000216099 MRPL58Q14197 206 aaKnown RBP12.27□□□□□ -0.45
APOBEC3D-201ENST00000216099 TMEM67Q5HYA8 995 aa12.27□□□□□ -0.45
APOBEC3D-201ENST00000216099 ADGRA1Q86SQ6 560 aa12.27□□□□□ -0.45
APOBEC3D-201ENST00000216099 CNBD1Q8NA66 436 aa12.27□□□□□ -0.45
APOBEC3D-201ENST00000216099 C8orf76Q96K31 380 aa12.27□□□□□ -0.45
APOBEC3D-201ENST00000216099 TMEM51Q9NW97 253 aa12.27□□□□□ -0.45
APOBEC3D-201ENST00000216099 CUEDC1Q9NWM3 386 aaPredicted RBP12.27□□□□□ -0.45
APOBEC3D-201ENST00000216099 ABCF2Q9UG63 623 aa12.27□□□□□ -0.45
APOBEC3D-201ENST00000216099 FOCADQ5VW36 1801 aa12.26□□□□□ -0.45
APOBEC3D-201ENST00000216099 GOLGA6L4A6NEF3 574 aa12.26□□□□□ -0.45
APOBEC3D-201ENST00000216099 ZBTB43O43298 467 aa12.26□□□□□ -0.45
APOBEC3D-201ENST00000216099 PPARAQ07869 468 aa12.26□□□□□ -0.45
APOBEC3D-201ENST00000216099 BIRC2Q13490 618 aa12.26□□□□□ -0.45
APOBEC3D-201ENST00000216099 HS1BP3Q53T59 392 aa12.26□□□□□ -0.45
APOBEC3D-201ENST00000216099 BRAPQ7Z569 592 aa12.26□□□□□ -0.45
APOBEC3D-201ENST00000216099 ZNF710Q8N1W2 664 aa12.26□□□□□ -0.45
APOBEC3D-201ENST00000216099 FBXO18Q8NFZ0 1043 aa12.26□□□□□ -0.45
APOBEC3D-201ENST00000216099 NKX2-3Q8TAU0 364 aa12.26□□□□□ -0.45
APOBEC3D-201ENST00000216099 UBA5Q9GZZ9 404 aa12.26□□□□□ -0.45
APOBEC3D-201ENST00000216099 QTRT2Q9H974 415 aaKnown RBP12.26□□□□□ -0.45
APOBEC3D-201ENST00000216099 ZSWIM5Q9P217 1185 aa12.26□□□□□ -0.45
APOBEC3D-201ENST00000216099 TACC3Q9Y6A5 838 aa12.26□□□□□ -0.45
APOBEC3D-201ENST00000216099 LGR5O75473 907 aa12.26□□□□□ -0.45
APOBEC3D-201ENST00000216099 SART3Q15020 963 aaKnown RBP12.26□□□□□ -0.45
APOBEC3D-201ENST00000216099 C4orf46Q504U0 113 aa12.26□□□□□ -0.45
APOBEC3D-201ENST00000216099 RBM43Q6ZSC3 357 aaKnown RBP12.26□□□□□ -0.45
APOBEC3D-201ENST00000216099 MIGA1Q8NAN2 632 aa12.26□□□□□ -0.45
APOBEC3D-201ENST00000216099 TRIM44Q96DX7 344 aaPredicted RBP12.26□□□□□ -0.45
APOBEC3D-201ENST00000216099 PGBD1Q96JS3 809 aa12.26□□□□□ -0.45
APOBEC3D-201ENST00000216099 TRIM34Q9BYJ4 488 aa12.26□□□□□ -0.45
APOBEC3D-201ENST00000216099 NUP62CLQ9H1M0 184 aa12.26□□□□□ -0.45
APOBEC3D-201ENST00000216099 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.25□□□□□ -0.45
APOBEC3D-201ENST00000216099 WTIPA6NIX2 430 aaPredicted RBP12.25□□□□□ -0.45
APOBEC3D-201ENST00000216099 LIG1P18858 919 aa12.25□□□□□ -0.45
APOBEC3D-201ENST00000216099 BDNFP23560 247 aa12.25□□□□□ -0.45
APOBEC3D-201ENST00000216099 ILDR1Q86SU0 546 aaPredicted RBP12.25□□□□□ -0.45
APOBEC3D-201ENST00000216099 NSUN4Q96CB9 384 aaKnown RBP12.25□□□□□ -0.45
APOBEC3D-201ENST00000216099 IFIT3O14879 490 aaKnown RBP12.25□□□□□ -0.45
APOBEC3D-201ENST00000216099 CLGNO14967 610 aa12.25□□□□□ -0.45
APOBEC3D-201ENST00000216099 FGRP09769 529 aa12.25□□□□□ -0.45
APOBEC3D-201ENST00000216099 KLRK1P26718 216 aa12.25□□□□□ -0.45
APOBEC3D-201ENST00000216099 CRY2Q49AN0 593 aa12.25□□□□□ -0.45
APOBEC3D-201ENST00000216099 PRR5LQ6MZQ0 368 aa12.25□□□□□ -0.45
APOBEC3D-201ENST00000216099 ZNF384Q8TF68 577 aa12.25□□□□□ -0.45
APOBEC3D-201ENST00000216099 CLSTN2Q9H4D0 955 aa12.25□□□□□ -0.45
APOBEC3D-201ENST00000216099 RTEL1Q9NZ71 1219 aa12.25□□□□□ -0.45
APOBEC3D-201ENST00000216099 MAGEC2Q9UBF1 373 aaPredicted RBP12.25□□□□□ -0.45
APOBEC3D-201ENST00000216099 XDHP47989 1333 aa12.24□□□□□ -0.45
APOBEC3D-201ENST00000216099 DDX60LQ5H9U9 1706 aaKnown RBP12.24□□□□□ -0.45
APOBEC3D-201ENST00000216099 SPDYE16A6NNV3 312 aaPredicted RBP12.24□□□□□ -0.45
APOBEC3D-201ENST00000216099 GOLGA8AA7E2F4 631 aa12.24□□□□□ -0.45
APOBEC3D-201ENST00000216099 NPHP1O15259 732 aa12.24□□□□□ -0.45
APOBEC3D-201ENST00000216099 GYS1P13807 737 aa12.24□□□□□ -0.45
APOBEC3D-201ENST00000216099 NTRK3Q16288 839 aa12.24□□□□□ -0.45
APOBEC3D-201ENST00000216099 MAP3K11Q16584 847 aa12.24□□□□□ -0.45
APOBEC3D-201ENST00000216099 MAP9Q49MG5 647 aa12.24□□□□□ -0.45
APOBEC3D-201ENST00000216099 KRT27Q7Z3Y8 459 aa12.24□□□□□ -0.45
APOBEC3D-201ENST00000216099 CCDC69A6NI79 296 aa12.24□□□□□ -0.45
APOBEC3D-201ENST00000216099 H3BRB1 525 aa12.24□□□□□ -0.45
APOBEC3D-201ENST00000216099 NDUFV2P19404 249 aa12.24□□□□□ -0.45
APOBEC3D-201ENST00000216099 NT5C2P49902 561 aa12.24□□□□□ -0.45
APOBEC3D-201ENST00000216099 ENOX2Q16206 610 aaKnown RBP12.24□□□□□ -0.45
APOBEC3D-201ENST00000216099 SYNE3Q6ZMZ3 975 aa12.24□□□□□ -0.45
APOBEC3D-201ENST00000216099 NFXL1Q6ZNB6 911 aa12.24□□□□□ -0.45
APOBEC3D-201ENST00000216099 TMC2Q8TDI7 906 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms