RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 TCIRG1Q13488 830 aa15.05■□□□□ -0
SF3A1-201ENST00000215793 CCT6BQ92526 530 aa15.05■□□□□ -0
SF3A1-201ENST00000215793 STK32BQ9NY57 414 aa15.05■□□□□ -0
SF3A1-201ENST00000215793 NEURL1BA8MQ27 555 aa15.05■□□□□ -0
SF3A1-201ENST00000215793 GADD45BO75293 160 aaPredicted RBP15.05■□□□□ -0
SF3A1-201ENST00000215793 PPFIA1Q13136 1202 aa15.05■□□□□ -0
SF3A1-201ENST00000215793 MTMR3Q13615 1198 aa15.05■□□□□ -0
SF3A1-201ENST00000215793 LGSNQ5TDP6 509 aa15.05■□□□□ -0
SF3A1-201ENST00000215793 MYRIPQ8NFW9 859 aa15.05■□□□□ -0
SF3A1-201ENST00000215793 RNF34Q969K3 372 aa15.05■□□□□ -0
SF3A1-201ENST00000215793 RASSF4Q9H2L5 321 aa15.05■□□□□ -0
SF3A1-201ENST00000215793 DAPK3O43293 454 aa15.04■□□□□ -0
SF3A1-201ENST00000215793 GCNT3O95395 438 aa15.04■□□□□ -0
SF3A1-201ENST00000215793 MTX1Q13505 466 aa15.04■□□□□ -0
SF3A1-201ENST00000215793 PEX26Q7Z412 305 aa15.04■□□□□ -0
SF3A1-201ENST00000215793 ZNF654Q8IZM8 581 aa15.04■□□□□ -0
SF3A1-201ENST00000215793 MRPL44Q9H9J2 332 aaKnown RBP15.04■□□□□ -0
SF3A1-201ENST00000215793 GPHNQ9NQX3 736 aaPredicted RBP15.04■□□□□ -0
SF3A1-201ENST00000215793 ATP8A2Q9NTI2 1148 aa15.04■□□□□ -0
SF3A1-201ENST00000215793 NOD1Q9Y239 953 aa15.04■□□□□ -0
SF3A1-201ENST00000215793 ERVV-2B6SEH9 535 aa15.04■□□□□ -0
SF3A1-201ENST00000215793 MAPKAPK5Q8IW41 473 aa15.04■□□□□ -0
SF3A1-201ENST00000215793 C10orf67Q8IYJ2 551 aa15.04■□□□□ -0
SF3A1-201ENST00000215793 ORAI2Q96SN7 254 aa15.04■□□□□ -0
SF3A1-201ENST00000215793 VPS54Q9P1Q0 977 aa15.04■□□□□ -0
SF3A1-201ENST00000215793 GJA3Q9Y6H8 435 aa15.04■□□□□ -0
SF3A1-201ENST00000215793 KDM3AQ9Y4C1 1321 aa15.04■□□□□ -0
SF3A1-201ENST00000215793 HSPA1LP34931 641 aa15.04■□□□□ -0
SF3A1-201ENST00000215793 GEN1Q17RS7 908 aa15.04■□□□□ -0
SF3A1-201ENST00000215793 VPS52Q8N1B4 723 aa15.04■□□□□ -0
SF3A1-201ENST00000215793 SLF1Q9BQI6 1058 aa15.04■□□□□ -0
SF3A1-201ENST00000215793 KIAA1468Q9P260 1216 aa15.04■□□□□ -0
SF3A1-201ENST00000215793 EIF4G3O43432 1585 aaKnown RBP15.04■□□□□ -0
SF3A1-201ENST00000215793 DNM2P50570 870 aa15.03■□□□□ -0
SF3A1-201ENST00000215793 ITIH3Q06033 890 aa15.03■□□□□ -0
SF3A1-201ENST00000215793 PPARAQ07869 468 aa15.03■□□□□ -0
SF3A1-201ENST00000215793 NEDD9Q14511 834 aa15.03■□□□□ -0
SF3A1-201ENST00000215793 H0YIN7 160 aa15.03■□□□□ -0
SF3A1-201ENST00000215793 CFBP00751 764 aa15.03■□□□□ -0
SF3A1-201ENST00000215793 RPS8P62241 208 aaKnown RBP15.03■□□□□ -0
SF3A1-201ENST00000215793 ATP11AP98196 1134 aa15.03■□□□□ -0
SF3A1-201ENST00000215793 ELF2Q15723 593 aa15.03■□□□□ -0
SF3A1-201ENST00000215793 NSMFQ6X4W1 530 aa15.03■□□□□ -0
SF3A1-201ENST00000215793 LARGE2Q8N3Y3 721 aa15.03■□□□□ -0
SF3A1-201ENST00000215793 TRIM31Q9BZY9 425 aa15.03■□□□□ -0
SF3A1-201ENST00000215793 PLEKHG3A1L390 1219 aa15.03■□□□□ -0
SF3A1-201ENST00000215793 ZYXQ15942 572 aaKnown RBP15.03■□□□□ -0
SF3A1-201ENST00000215793 ME3Q16798 604 aa15.03■□□□□ -0
SF3A1-201ENST00000215793 POTEDQ86YR6 584 aa15.03■□□□□ -0
SF3A1-201ENST00000215793 IFIH1Q9BYX4 1025 aaKnown RBP15.03■□□□□ -0
SF3A1-201ENST00000215793 TRIM6Q9C030 488 aaPredicted RBP15.03■□□□□ -0
SF3A1-201ENST00000215793 NDUFB9Q9Y6M9 179 aa15.03■□□□□ -0
SF3A1-201ENST00000215793 ABCC4O15439 1325 aa15.03■□□□□ -0
SF3A1-201ENST00000215793 NELFCDQ8IXH7 590 aa15.03■□□□□ -0
SF3A1-201ENST00000215793 ZBTB9Q96C00 473 aa15.03■□□□□ -0
SF3A1-201ENST00000215793 GBP6Q6ZN66 633 aa15.02■□□□□ -0
SF3A1-201ENST00000215793 CPXCR1Q8N123 301 aa15.02■□□□□ -0
SF3A1-201ENST00000215793 OR8K1Q8NGG5 319 aa15.02■□□□□ -0
SF3A1-201ENST00000215793 TGFBRAP1Q8WUH2 860 aa15.02■□□□□ -0
SF3A1-201ENST00000215793 CD19P15391 556 aa15.02■□□□□ -0
SF3A1-201ENST00000215793 NOSTRINQ8IVI9 506 aa15.02■□□□□ -0
SF3A1-201ENST00000215793 CACNA2D3Q8IZS8 1091 aa15.02■□□□□ -0
SF3A1-201ENST00000215793 TBC1D31Q96DN5 1066 aa15.02■□□□□ -0
SF3A1-201ENST00000215793 SERTAD1Q9UHV2 236 aa15.02■□□□□ -0
SF3A1-201ENST00000215793 SMCO2A6NFE2 343 aa15.02□□□□□ -0.01
SF3A1-201ENST00000215793 HSPA2P54652 639 aa15.02□□□□□ -0.01
SF3A1-201ENST00000215793 GABPB1Q06547 395 aaPredicted RBP15.02□□□□□ -0.01
SF3A1-201ENST00000215793 CCDC105Q8IYK2 499 aa15.02□□□□□ -0.01
SF3A1-201ENST00000215793 AFAP1L2Q8N4X5 818 aa15.02□□□□□ -0.01
SF3A1-201ENST00000215793 CHURC1Q8WUH1 139 aa15.02□□□□□ -0.01
SF3A1-201ENST00000215793 XPO4Q9C0E2 1151 aaKnown RBP15.02□□□□□ -0.01
SF3A1-201ENST00000215793 USP44Q9H0E7 712 aa15.02□□□□□ -0.01
SF3A1-201ENST00000215793 KLHL7Q8IXQ5 586 aa15.02□□□□□ -0.01
SF3A1-201ENST00000215793 GIPC1O14908 333 aa15.01□□□□□ -0.01
SF3A1-201ENST00000215793 IGSF3O75054 1194 aa15.01□□□□□ -0.01
SF3A1-201ENST00000215793 CRCPO75575 148 aa15.01□□□□□ -0.01
SF3A1-201ENST00000215793 KRBA2Q6ZNG9 492 aa15.01□□□□□ -0.01
SF3A1-201ENST00000215793 MAEAQ7L5Y9 396 aa15.01□□□□□ -0.01
SF3A1-201ENST00000215793 CCDC125Q86Z20 511 aa15.01□□□□□ -0.01
SF3A1-201ENST00000215793 TRIML1Q8N9V2 468 aa15.01□□□□□ -0.01
SF3A1-201ENST00000215793 RRAGAQ7L523 313 aa15.01□□□□□ -0.01
SF3A1-201ENST00000215793 FAM207AQ9NSI2 230 aaPredicted RBP15.01□□□□□ -0.01
SF3A1-201ENST00000215793 TBC1D7Q9P0N9 293 aa15.01□□□□□ -0.01
SF3A1-201ENST00000215793 PARP2Q9UGN5 583 aa15.01□□□□□ -0.01
SF3A1-201ENST00000215793 ERBB4Q15303 1308 aa15.01□□□□□ -0.01
SF3A1-201ENST00000215793 INPP5BP32019 993 aa15.01□□□□□ -0.01
SF3A1-201ENST00000215793 USH1GQ495M9 461 aa15.01□□□□□ -0.01
SF3A1-201ENST00000215793 VSIG1Q86XK7 387 aa15.01□□□□□ -0.01
SF3A1-201ENST00000215793 TRMT44Q8IYL2 757 aaKnown RBP15.01□□□□□ -0.01
SF3A1-201ENST00000215793 CABS1Q96KC9 395 aa15.01□□□□□ -0.01
SF3A1-201ENST00000215793 RAB17Q9H0T7 212 aa15.01□□□□□ -0.01
SF3A1-201ENST00000215793 PLCB1Q9NQ66 1216 aa15.01□□□□□ -0.01
SF3A1-201ENST00000215793 GINS2Q9Y248 185 aa15.01□□□□□ -0.01
SF3A1-201ENST00000215793 LMTK3Q96Q04 1460 aa15.01□□□□□ -0.01
SF3A1-201ENST00000215793 USP17L12C9JPN9 530 aa15.01□□□□□ -0.01
SF3A1-201ENST00000215793 USP17L21D6R901 530 aa15.01□□□□□ -0.01
SF3A1-201ENST00000215793 DDX39AO00148 427 aaKnown RBP15.01□□□□□ -0.01
SF3A1-201ENST00000215793 PFKFB1P16118 471 aa15.01□□□□□ -0.01
SF3A1-201ENST00000215793 STAT1P42224 750 aa15.01□□□□□ -0.01
SF3A1-201ENST00000215793 ARHGAP25P42331 645 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms