RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 CABP5Q9NP86 173 aa19.43■□□□□ 0.7
POLR2E-201ENST00000215587 MYH8P13535 1937 aa19.43■□□□□ 0.7
POLR2E-201ENST00000215587 LARGE1O95461 756 aa19.42■□□□□ 0.7
POLR2E-201ENST00000215587 MAP3K10Q02779 954 aa19.42■□□□□ 0.7
POLR2E-201ENST00000215587 STK3Q13188 491 aa19.42■□□□□ 0.7
POLR2E-201ENST00000215587 ME3Q16798 604 aa19.42■□□□□ 0.7
POLR2E-201ENST00000215587 ABCB5Q2M3G0 1257 aa19.42■□□□□ 0.7
POLR2E-201ENST00000215587 NBPF12Q5TAG4 269 aaPredicted RBP19.42■□□□□ 0.7
POLR2E-201ENST00000215587 APOA5Q6Q788 366 aa19.42■□□□□ 0.7
POLR2E-201ENST00000215587 TMEM179Q6ZVK1 233 aa19.42■□□□□ 0.7
POLR2E-201ENST00000215587 MIGA2Q7L4E1 593 aa19.42■□□□□ 0.7
POLR2E-201ENST00000215587 BRPF3Q9ULD4 1205 aa19.42■□□□□ 0.7
POLR2E-201ENST00000215587 SLC12A7Q9Y666 1083 aa19.42■□□□□ 0.7
POLR2E-201ENST00000215587 PDIA3P30101 505 aaKnown RBP19.41■□□□□ 0.7
POLR2E-201ENST00000215587 CTCFP49711 727 aaPredicted RBP19.41■□□□□ 0.7
POLR2E-201ENST00000215587 CUL4AQ13619 759 aa19.41■□□□□ 0.7
POLR2E-201ENST00000215587 CATIPQ7Z7H3 387 aa19.41■□□□□ 0.7
POLR2E-201ENST00000215587 KAT14Q9H8E8 782 aa19.41■□□□□ 0.7
POLR2E-201ENST00000215587 SENP2Q9HC62 589 aa19.41■□□□□ 0.7
POLR2E-201ENST00000215587 IL17RBQ9NRM6 502 aa19.41■□□□□ 0.7
POLR2E-201ENST00000215587 STX8Q9UNK0 236 aa19.41■□□□□ 0.7
POLR2E-201ENST00000215587 CLEC11AQ9Y240 323 aa19.41■□□□□ 0.7
POLR2E-201ENST00000215587 ADM5C9JUS6 153 aa19.4■□□□□ 0.7
POLR2E-201ENST00000215587 ZBTB43O43298 467 aa19.4■□□□□ 0.7
POLR2E-201ENST00000215587 PFKFB2O60825 505 aa19.4■□□□□ 0.7
POLR2E-201ENST00000215587 GDF11O95390 407 aa19.4■□□□□ 0.7
POLR2E-201ENST00000215587 CCDC83Q8IWF9 413 aa19.4■□□□□ 0.7
POLR2E-201ENST00000215587 ZNF654Q8IZM8 581 aa19.4■□□□□ 0.7
POLR2E-201ENST00000215587 ANKS1AQ92625 1134 aa19.4■□□□□ 0.7
POLR2E-201ENST00000215587 CEP95Q96GE4 821 aa19.4■□□□□ 0.7
POLR2E-201ENST00000215587 ZNF341Q9BYN7 854 aa19.4■□□□□ 0.7
POLR2E-201ENST00000215587 MTMR4Q9NYA4 1195 aa19.4■□□□□ 0.7
POLR2E-201ENST00000215587 IGKV6D-41A0A0C4DH26 115 aa19.39■□□□□ 0.69
POLR2E-201ENST00000215587 GOLGA8AA7E2F4 631 aa19.39■□□□□ 0.69
POLR2E-201ENST00000215587 GH2P01242 217 aa19.39■□□□□ 0.69
POLR2E-201ENST00000215587 CALM1P0DP23 149 aa19.39■□□□□ 0.69
POLR2E-201ENST00000215587 CALM2P0DP24 149 aa19.39■□□□□ 0.69
POLR2E-201ENST00000215587 CALM3P0DP25 149 aa19.39■□□□□ 0.69
POLR2E-201ENST00000215587 METAP2P50579 478 aaKnown RBP eCLIP19.39■□□□□ 0.692e-17■□□□□ 9.8
POLR2E-201ENST00000215587 RCAN1P53805 252 aa19.39■□□□□ 0.69
POLR2E-201ENST00000215587 PRAMEF18Q5VWM3 479 aa19.39■□□□□ 0.69
POLR2E-201ENST00000215587 RCSD1Q6JBY9 416 aa19.39■□□□□ 0.69
POLR2E-201ENST00000215587 USP48Q86UV5 1035 aa19.39■□□□□ 0.69
POLR2E-201ENST00000215587 MICU3Q86XE3 530 aa19.39■□□□□ 0.69
POLR2E-201ENST00000215587 NECAB1Q8N987 351 aa19.39■□□□□ 0.69
POLR2E-201ENST00000215587 SPRYD3Q8NCJ5 442 aa19.39■□□□□ 0.69
POLR2E-201ENST00000215587 GTF3C6Q969F1 213 aa19.39■□□□□ 0.69
POLR2E-201ENST00000215587 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.39■□□□□ 0.69
POLR2E-201ENST00000215587 KANSL2Q9H9L4 492 aa19.39■□□□□ 0.69
POLR2E-201ENST00000215587 DHX16O60231 1041 aaKnown RBP19.38■□□□□ 0.69
POLR2E-201ENST00000215587 DDAH1O94760 285 aa19.38■□□□□ 0.69
POLR2E-201ENST00000215587 TTLL1O95922 423 aa19.38■□□□□ 0.69
POLR2E-201ENST00000215587 TOP1P11387 765 aaKnown RBP19.38■□□□□ 0.69
POLR2E-201ENST00000215587 NF2P35240 595 aa19.38■□□□□ 0.69
POLR2E-201ENST00000215587 CHADLQ6NUI6 762 aa19.38■□□□□ 0.69
POLR2E-201ENST00000215587 CDC37L1Q7L3B6 337 aa19.38■□□□□ 0.69
POLR2E-201ENST00000215587 INTS4Q96HW7 963 aaKnown RBP19.38■□□□□ 0.69
POLR2E-201ENST00000215587 GINM1Q9NU53 330 aa19.38■□□□□ 0.69
POLR2E-201ENST00000215587 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.38■□□□□ 0.69
POLR2E-201ENST00000215587 CAP2P40123 477 aa19.37■□□□□ 0.69
POLR2E-201ENST00000215587 CCT2P78371 535 aaKnown RBP19.37■□□□□ 0.69
POLR2E-201ENST00000215587 ICA1Q05084 483 aa19.37■□□□□ 0.69
POLR2E-201ENST00000215587 SEPT2Q15019 361 aa19.37■□□□□ 0.69
POLR2E-201ENST00000215587 RAB3GAP1Q15042 981 aa19.37■□□□□ 0.69
POLR2E-201ENST00000215587 LDHDQ86WU2 507 aa19.37■□□□□ 0.69
POLR2E-201ENST00000215587 PNMA1Q8ND90 353 aa19.37■□□□□ 0.69
POLR2E-201ENST00000215587 NUP133Q8WUM0 1156 aa19.37■□□□□ 0.69
POLR2E-201ENST00000215587 TMEM47Q9BQJ4 181 aa19.37■□□□□ 0.69
POLR2E-201ENST00000215587 MYL10Q9BUA6 226 aa19.37■□□□□ 0.69
POLR2E-201ENST00000215587 FOXD4L1Q9NU39 408 aa19.37■□□□□ 0.69
POLR2E-201ENST00000215587 ZBTB21Q9ULJ3 1066 aa19.37■□□□□ 0.69
POLR2E-201ENST00000215587 HPS5Q9UPZ3 1129 aa19.37■□□□□ 0.69
POLR2E-201ENST00000215587 GREB1LQ9C091 1923 aaPredicted RBP19.37■□□□□ 0.69
POLR2E-201ENST00000215587 PHF20L1A8MW92 1017 aa19.36■□□□□ 0.69
POLR2E-201ENST00000215587 CTNND1O60716 968 aaKnown RBP19.36■□□□□ 0.69
POLR2E-201ENST00000215587 ASNSP08243 561 aa19.36■□□□□ 0.69
POLR2E-201ENST00000215587 NOVP48745 357 aa19.36■□□□□ 0.69
POLR2E-201ENST00000215587 ATP2B2Q01814 1243 aa19.36■□□□□ 0.69
POLR2E-201ENST00000215587 SCRN1Q12765 414 aa19.36■□□□□ 0.69
POLR2E-201ENST00000215587 RRP1BQ14684 758 aaKnown RBP19.36■□□□□ 0.69
POLR2E-201ENST00000215587 RAB11FIP4Q86YS3 637 aa19.36■□□□□ 0.69
POLR2E-201ENST00000215587 CDCA5Q96FF9 252 aa19.36■□□□□ 0.69
POLR2E-201ENST00000215587 GLIS2Q9BZE0 524 aaPredicted RBP19.36■□□□□ 0.69
POLR2E-201ENST00000215587 NYAP2Q9P242 653 aa19.36■□□□□ 0.69
POLR2E-201ENST00000215587 CLIP2Q9UDT6 1046 aa19.36■□□□□ 0.69
POLR2E-201ENST00000215587 SSC5DA1L4H1 1573 aa19.36■□□□□ 0.69
POLR2E-201ENST00000215587 NID2Q14112 1375 aa19.35■□□□□ 0.69
POLR2E-201ENST00000215587 CCDC196A0A1B0GTZ2 297 aa19.35■□□□□ 0.69
POLR2E-201ENST00000215587 CPLX1O14810 134 aa19.35■□□□□ 0.69
POLR2E-201ENST00000215587 PPP2R5BQ15173 497 aa19.35■□□□□ 0.69
POLR2E-201ENST00000215587 RTN1Q16799 776 aa19.35■□□□□ 0.69
POLR2E-201ENST00000215587 SHROOM1Q2M3G4 852 aaPredicted RBP19.35■□□□□ 0.69
POLR2E-201ENST00000215587 CPLX2Q6PUV4 134 aaKnown RBP19.35■□□□□ 0.69
POLR2E-201ENST00000215587 CLEC10AQ8IUN9 316 aa19.35■□□□□ 0.69
POLR2E-201ENST00000215587 ABHD8Q96I13 439 aa19.35■□□□□ 0.69
POLR2E-201ENST00000215587 WRNIP1Q96S55 665 aa19.35■□□□□ 0.69
POLR2E-201ENST00000215587 NCOA5Q9HCD5 579 aaKnown RBP19.35■□□□□ 0.69
POLR2E-201ENST00000215587 ZNF112Q9UJU3 913 aa19.35■□□□□ 0.69
POLR2E-201ENST00000215587 PPP1R12BO60237 982 aaPredicted RBP19.34■□□□□ 0.69
POLR2E-201ENST00000215587 POTEIP0CG38 1075 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms