RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 ENOX2Q16206 610 aaKnown RBP17.15■□□□□ 0.34
EFNB1-201ENST00000204961 TRIM65Q6PJ69 517 aa17.15■□□□□ 0.34
EFNB1-201ENST00000204961 TC2NQ8N9U0 490 aa17.15■□□□□ 0.34
EFNB1-201ENST00000204961 SLFN14P0C7P3 912 aa17.14■□□□□ 0.34
EFNB1-201ENST00000204961 PPP2R3AQ06190 1150 aa17.14■□□□□ 0.34
EFNB1-201ENST00000204961 GUCA1BQ9UMX6 200 aa17.14■□□□□ 0.34
EFNB1-201ENST00000204961 PTPREP23469 700 aa17.14■□□□□ 0.33
EFNB1-201ENST00000204961 EIF6P56537 245 aaKnown RBP17.14■□□□□ 0.33
EFNB1-201ENST00000204961 CUL4BQ13620 913 aa17.14■□□□□ 0.33
EFNB1-201ENST00000204961 IQCA1Q86XH1 822 aa17.14■□□□□ 0.33
EFNB1-201ENST00000204961 HPS3Q969F9 1004 aa17.14■□□□□ 0.33
EFNB1-201ENST00000204961 PSMB7Q99436 277 aa17.14■□□□□ 0.33
EFNB1-201ENST00000204961 DNAJC5Q9H3Z4 198 aa17.14■□□□□ 0.33
EFNB1-201ENST00000204961 RABEP2Q9H5N1 569 aa17.14■□□□□ 0.33
EFNB1-201ENST00000204961 DIXDC1Q155Q3 683 aa17.14■□□□□ 0.33
EFNB1-201ENST00000204961 RILPL1Q5EBL4 403 aa17.14■□□□□ 0.33
EFNB1-201ENST00000204961 TXNRD3Q86VQ6 643 aa17.14■□□□□ 0.33
EFNB1-201ENST00000204961 DDB1Q16531 1140 aa17.13■□□□□ 0.33
EFNB1-201ENST00000204961 RAD9BQ6WBX8 426 aa17.13■□□□□ 0.33
EFNB1-201ENST00000204961 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.13■□□□□ 0.33
EFNB1-201ENST00000204961 SCN11AQ9UI33 1791 aa17.13■□□□□ 0.33
EFNB1-201ENST00000204961 RNF225M0QZC1 329 aaPredicted RBP17.13■□□□□ 0.33
EFNB1-201ENST00000204961 PNMA6AP0CW24 399 aaPredicted RBP17.13■□□□□ 0.33
EFNB1-201ENST00000204961 KRT2P35908 639 aa17.13■□□□□ 0.33
EFNB1-201ENST00000204961 FAM193AP78312 1265 aa17.13■□□□□ 0.33
EFNB1-201ENST00000204961 ANKRD18AQ8IVF6 992 aa17.13■□□□□ 0.33
EFNB1-201ENST00000204961 WASF1Q92558 559 aa17.13■□□□□ 0.33
EFNB1-201ENST00000204961 CNNM2Q9H8M5 875 aa17.13■□□□□ 0.33
EFNB1-201ENST00000204961 LOC102724428A0A0B4J2F2 783 aa17.13■□□□□ 0.33
EFNB1-201ENST00000204961 USP17L3A6NCW0 530 aa17.13■□□□□ 0.33
EFNB1-201ENST00000204961 USP17L4A6NCW7 530 aa17.13■□□□□ 0.33
EFNB1-201ENST00000204961 ZSCAN12O43309 604 aa17.13■□□□□ 0.33
EFNB1-201ENST00000204961 SIK1P57059 783 aa17.13■□□□□ 0.33
EFNB1-201ENST00000204961 TRIM28Q13263 835 aaKnown RBP17.13■□□□□ 0.33
EFNB1-201ENST00000204961 USP17L1Q7RTZ2 530 aa17.13■□□□□ 0.33
EFNB1-201ENST00000204961 STAG2Q8N3U4 1231 aa17.13■□□□□ 0.33
EFNB1-201ENST00000204961 CTCFLQ8NI51 663 aaPredicted RBP17.13■□□□□ 0.33
EFNB1-201ENST00000204961 ZSCAN10Q96SZ4 725 aaPredicted RBP17.13■□□□□ 0.33
EFNB1-201ENST00000204961 CCDC87Q9NVE4 849 aa17.13■□□□□ 0.33
EFNB1-201ENST00000204961 IKBKBO14920 756 aa17.12■□□□□ 0.33
EFNB1-201ENST00000204961 XBP1P17861 261 aa17.12■□□□□ 0.33
EFNB1-201ENST00000204961 TTC38Q5R3I4 469 aa17.12■□□□□ 0.33
EFNB1-201ENST00000204961 HEATR3Q7Z4Q2 680 aa17.12■□□□□ 0.33
EFNB1-201ENST00000204961 PAGE5Q96GU1 130 aa17.12■□□□□ 0.33
EFNB1-201ENST00000204961 PARP3Q9Y6F1 533 aa17.12■□□□□ 0.33
EFNB1-201ENST00000204961 SYNRGQ9UMZ2 1314 aa17.12■□□□□ 0.33
EFNB1-201ENST00000204961 ARID4AP29374 1257 aaPredicted RBP17.12■□□□□ 0.33
EFNB1-201ENST00000204961 FXR1P51114 621 aaKnown RBP eCLIP17.12■□□□□ 0.33
EFNB1-201ENST00000204961 ST5P78524 1137 aa17.12■□□□□ 0.33
EFNB1-201ENST00000204961 TERF2Q15554 542 aa17.12■□□□□ 0.33
EFNB1-201ENST00000204961 CAVIN4Q5BKX8 364 aa17.12■□□□□ 0.33
EFNB1-201ENST00000204961 MROH5Q6ZUA9 1318 aa17.11■□□□□ 0.33
EFNB1-201ENST00000204961 CCDC196A0A1B0GTZ2 297 aa17.11■□□□□ 0.33
EFNB1-201ENST00000204961 AKR1B15C9JRZ8 316 aaPredicted RBP17.11■□□□□ 0.33
EFNB1-201ENST00000204961 ANKRD65E5RJM6 399 aa17.11■□□□□ 0.33
EFNB1-201ENST00000204961 LIFRP42702 1097 aa17.11■□□□□ 0.33
EFNB1-201ENST00000204961 SGMS1Q86VZ5 419 aa17.11■□□□□ 0.33
EFNB1-201ENST00000204961 SRBD1Q8N5C6 995 aaKnown RBP17.11■□□□□ 0.33
EFNB1-201ENST00000204961 PSDA5PKW4 1024 aaPredicted RBP17.11■□□□□ 0.33
EFNB1-201ENST00000204961 F8W031 263 aaPredicted RBP17.11■□□□□ 0.33
EFNB1-201ENST00000204961 ARHGAP6O43182 974 aa17.11■□□□□ 0.33
EFNB1-201ENST00000204961 ATP2B2Q01814 1243 aa17.11■□□□□ 0.33
EFNB1-201ENST00000204961 SRGAP2O75044 1071 aa17.1■□□□□ 0.33
EFNB1-201ENST00000204961 BMS1Q14692 1282 aaKnown RBP17.1■□□□□ 0.33
EFNB1-201ENST00000204961 NKX1-1Q15270 411 aaPredicted RBP17.1■□□□□ 0.33
EFNB1-201ENST00000204961 PARD6BQ9BYG5 372 aa17.1■□□□□ 0.33
EFNB1-201ENST00000204961 ARGLU1Q9NWB6 273 aaPredicted RBP17.1■□□□□ 0.33
EFNB1-201ENST00000204961 ANKIB1Q9P2G1 1089 aa17.1■□□□□ 0.33
EFNB1-201ENST00000204961 N4BP2Q86UW6 1770 aaPredicted RBP17.1■□□□□ 0.33
EFNB1-201ENST00000204961 ACTN4O43707 911 aaKnown RBP17.1■□□□□ 0.33
EFNB1-201ENST00000204961 FGFR2P21802 821 aa17.1■□□□□ 0.33
EFNB1-201ENST00000204961 MATR3P43243 847 aaKnown RBP eCLIP17.1■□□□□ 0.33
EFNB1-201ENST00000204961 USP5P45974 858 aa17.1■□□□□ 0.33
EFNB1-201ENST00000204961 TMEM51Q9NW97 253 aa17.1■□□□□ 0.33
EFNB1-201ENST00000204961 HDAC6Q9UBN7 1215 aa17.1■□□□□ 0.33
EFNB1-201ENST00000204961 COL5A2P05997 1499 aaPredicted RBP17.1■□□□□ 0.33
EFNB1-201ENST00000204961 SLURP2P0DP57 97 aa17.09■□□□□ 0.33
EFNB1-201ENST00000204961 MDM2Q00987 491 aaPredicted RBP17.09■□□□□ 0.33
EFNB1-201ENST00000204961 UBXN1Q04323 297 aa17.09■□□□□ 0.33
EFNB1-201ENST00000204961 INF2Q27J81 1249 aa17.09■□□□□ 0.33
EFNB1-201ENST00000204961 NCAPH2Q6IBW4 605 aa17.09■□□□□ 0.33
EFNB1-201ENST00000204961 SAMD1Q6SPF0 538 aaPredicted RBP17.09■□□□□ 0.33
EFNB1-201ENST00000204961 CHP1Q99653 195 aa17.09■□□□□ 0.33
EFNB1-201ENST00000204961 MKNK2Q9HBH9 465 aa17.09■□□□□ 0.33
EFNB1-201ENST00000204961 EP400Q96L91 3159 aa17.09■□□□□ 0.33
EFNB1-201ENST00000204961 SASH3O75995 380 aa17.09■□□□□ 0.33
EFNB1-201ENST00000204961 PKN1Q16512 942 aa17.09■□□□□ 0.33
EFNB1-201ENST00000204961 SLC35F6Q8N357 371 aa17.09■□□□□ 0.33
EFNB1-201ENST00000204961 RNF41Q9H4P4 317 aaPredicted RBP17.09■□□□□ 0.33
EFNB1-201ENST00000204961 MORC2Q9Y6X9 1032 aaPredicted RBP17.09■□□□□ 0.33
EFNB1-201ENST00000204961 MRC1P22897 1456 aa17.09■□□□□ 0.33
EFNB1-201ENST00000204961 TFAP4Q01664 338 aa17.09■□□□□ 0.33
EFNB1-201ENST00000204961 FAM98CQ17RN3 349 aaKnown RBP17.09■□□□□ 0.33
EFNB1-201ENST00000204961 ZNF34Q8IZ26 560 aa17.09■□□□□ 0.33
EFNB1-201ENST00000204961 GJA10Q969M2 543 aa17.09■□□□□ 0.33
EFNB1-201ENST00000204961 BRMS1Q9HCU9 246 aa17.09■□□□□ 0.33
EFNB1-201ENST00000204961 GNL3LQ9NVN8 582 aaKnown RBP17.09■□□□□ 0.33
EFNB1-201ENST00000204961 FHOD1Q9Y613 1164 aa17.09■□□□□ 0.33
EFNB1-201ENST00000204961 KIF2AO00139 706 aaPredicted RBP17.08■□□□□ 0.33
EFNB1-201ENST00000204961 ZPR1O75312 459 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms