RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 SLC10A5Q5PT55 438 aa15.03■□□□□ -0
CTNS-201ENST00000046640 TRMT44Q8IYL2 757 aaKnown RBP15.03■□□□□ -0
CTNS-201ENST00000046640 NYXQ9GZU5 481 aa15.03■□□□□ -0
CTNS-201ENST00000046640 FANCLQ9NW38 375 aa15.03■□□□□ -0
CTNS-201ENST00000046640 NRAPQ86VF7 1730 aa15.03■□□□□ -0
CTNS-201ENST00000046640 ARAP2Q8WZ64 1704 aa15.03■□□□□ -0
CTNS-201ENST00000046640 DOCK2Q92608 1830 aa15.03■□□□□ -0
CTNS-201ENST00000046640 ERICH4A6NGS2 130 aa15.03■□□□□ -0
CTNS-201ENST00000046640 TSPY2A6NKD2 308 aa15.03■□□□□ -0
CTNS-201ENST00000046640 FANCCQ00597 558 aa15.03■□□□□ -0
CTNS-201ENST00000046640 RILPL1Q5EBL4 403 aa15.03■□□□□ -0
CTNS-201ENST00000046640 ZNF397Q8NF99 534 aaPredicted RBP15.03■□□□□ -0
CTNS-201ENST00000046640 STAMQ92783 540 aa15.03■□□□□ -0
CTNS-201ENST00000046640 EPSTI1Q96J88 318 aa15.03■□□□□ -0
CTNS-201ENST00000046640 FOXP1Q9H334 677 aaPredicted RBP15.03■□□□□ -0
CTNS-201ENST00000046640 CHD4Q14839 1912 aa15.02■□□□□ -0
CTNS-201ENST00000046640 AFMP43652 599 aa15.02■□□□□ -0
CTNS-201ENST00000046640 TROAPQ12815 778 aa15.02■□□□□ -0
CTNS-201ENST00000046640 BRIP1Q9BX63 1249 aa15.02■□□□□ -0
CTNS-201ENST00000046640 HSD3B7Q9H2F3 369 aa15.02■□□□□ -0
CTNS-201ENST00000046640 DNAI1Q9UI46 699 aa15.02■□□□□ -0
CTNS-201ENST00000046640 ANAPC4Q9UJX5 808 aa15.02■□□□□ -0
CTNS-201ENST00000046640 CNTNAP4Q9C0A0 1308 aa15.02□□□□□ -0.01
CTNS-201ENST00000046640 TM4SF1P30408 202 aa15.02□□□□□ -0.01
CTNS-201ENST00000046640 GSDMDP57764 484 aa15.02□□□□□ -0.01
CTNS-201ENST00000046640 TPM4P67936 248 aa15.02□□□□□ -0.01
CTNS-201ENST00000046640 VPS72Q15906 364 aa15.02□□□□□ -0.01
CTNS-201ENST00000046640 CFAP100Q494V2 611 aa15.02□□□□□ -0.01
CTNS-201ENST00000046640 FAM196AQ6ZSG2 479 aa15.02□□□□□ -0.01
CTNS-201ENST00000046640 DHX58Q96C10 678 aa15.02□□□□□ -0.01
CTNS-201ENST00000046640 CRNKL1Q9BZJ0 848 aaKnown RBP15.02□□□□□ -0.01
CTNS-201ENST00000046640 TUBE1Q9UJT0 475 aa15.02□□□□□ -0.01
CTNS-201ENST00000046640 KIF20AO95235 890 aa15.01□□□□□ -0.01
CTNS-201ENST00000046640 PTPREP23469 700 aa15.01□□□□□ -0.01
CTNS-201ENST00000046640 OLFM4Q6UX06 510 aa15.01□□□□□ -0.01
CTNS-201ENST00000046640 SRBD1Q8N5C6 995 aaKnown RBP15.01□□□□□ -0.01
CTNS-201ENST00000046640 TIGD1Q96MW7 591 aa15.01□□□□□ -0.01
CTNS-201ENST00000046640 SYCP1Q15431 976 aa15.01□□□□□ -0.01
CTNS-201ENST00000046640 ERO1AQ96HE7 468 aa15.01□□□□□ -0.01
CTNS-201ENST00000046640 RNF26Q9BY78 433 aaPredicted RBP15.01□□□□□ -0.01
CTNS-201ENST00000046640 TMEM232C9JQI7 657 aa15□□□□□ -0.01
CTNS-201ENST00000046640 COBLO75128 1261 aa15□□□□□ -0.01
CTNS-201ENST00000046640 USP5P45974 858 aa15□□□□□ -0.01
CTNS-201ENST00000046640 UBASH3AP57075 661 aa15□□□□□ -0.01
CTNS-201ENST00000046640 FUT2Q10981 343 aa15□□□□□ -0.01
CTNS-201ENST00000046640 SLC44A5Q8NCS7 719 aa15□□□□□ -0.01
CTNS-201ENST00000046640 SAP30BPQ9UHR5 308 aaKnown RBP15□□□□□ -0.01
CTNS-201ENST00000046640 KRT2P35908 639 aa15□□□□□ -0.01
CTNS-201ENST00000046640 MYL5Q02045 173 aa15□□□□□ -0.01
CTNS-201ENST00000046640 POSTNQ15063 836 aa15□□□□□ -0.01
CTNS-201ENST00000046640 CTCFLQ8NI51 663 aaPredicted RBP15□□□□□ -0.01
CTNS-201ENST00000046640 ANKRD2Q9GZV1 360 aa15□□□□□ -0.01
CTNS-201ENST00000046640 EPC1Q9H2F5 836 aa15□□□□□ -0.01
CTNS-201ENST00000046640 ECM29Q5VYK3 1845 aa15□□□□□ -0.01
CTNS-201ENST00000046640 A0A087X0B3 334 aa14.99□□□□□ -0.01
CTNS-201ENST00000046640 TRIM75PA6NK02 468 aa14.99□□□□□ -0.01
CTNS-201ENST00000046640 XBP1P17861 261 aa14.99□□□□□ -0.01
CTNS-201ENST00000046640 TRAPPC3LQ5T215 181 aa14.99□□□□□ -0.01
CTNS-201ENST00000046640 KRT222Q8N1A0 295 aa14.99□□□□□ -0.01
CTNS-201ENST00000046640 SH3RF3Q8TEJ3 882 aaPredicted RBP14.99□□□□□ -0.01
CTNS-201ENST00000046640 CACNA1SQ13698 1873 aa14.99□□□□□ -0.01
CTNS-201ENST00000046640 TFAP4Q01664 338 aa14.99□□□□□ -0.01
CTNS-201ENST00000046640 KLHL10Q6JEL2 608 aa14.99□□□□□ -0.01
CTNS-201ENST00000046640 GPKOWQ92917 476 aaPredicted RBP eCLIP14.99□□□□□ -0.01
CTNS-201ENST00000046640 BPIFA3Q9BQP9 254 aa14.99□□□□□ -0.01
CTNS-201ENST00000046640 OSBPL5Q9H0X9 879 aaPredicted RBP14.99□□□□□ -0.01
CTNS-201ENST00000046640 MAN1B1Q9UKM7 699 aa14.99□□□□□ -0.01
CTNS-201ENST00000046640 MORC2Q9Y6X9 1032 aaPredicted RBP14.99□□□□□ -0.01
CTNS-201ENST00000046640 VWA3AA6NCI4 1184 aa14.99□□□□□ -0.01
CTNS-201ENST00000046640 USP17L3A6NCW0 530 aa14.99□□□□□ -0.01
CTNS-201ENST00000046640 USP17L4A6NCW7 530 aa14.99□□□□□ -0.01
CTNS-201ENST00000046640 URI1O94763 535 aaPredicted RBP14.99□□□□□ -0.01
CTNS-201ENST00000046640 MDM2Q00987 491 aaPredicted RBP14.99□□□□□ -0.01
CTNS-201ENST00000046640 FMR1Q06787 632 aaKnown RBP eCLIP14.99□□□□□ -0.01
CTNS-201ENST00000046640 PIK3AP1Q6ZUJ8 805 aa14.99□□□□□ -0.01
CTNS-201ENST00000046640 RASGRP2Q7LDG7 609 aa14.99□□□□□ -0.01
CTNS-201ENST00000046640 USP17L1Q7RTZ2 530 aa14.99□□□□□ -0.01
CTNS-201ENST00000046640 PHF20Q9BVI0 1012 aa14.99□□□□□ -0.01
CTNS-201ENST00000046640 ZNF446Q9NWS9 450 aa14.99□□□□□ -0.01
CTNS-201ENST00000046640 BCORQ6W2J9 1755 aa14.98□□□□□ -0.01
CTNS-201ENST00000046640 CDC25AP30304 524 aa14.98□□□□□ -0.01
CTNS-201ENST00000046640 NLRP5P59047 1200 aa14.98□□□□□ -0.01
CTNS-201ENST00000046640 ARHGAP29Q52LW3 1261 aa14.98□□□□□ -0.01
CTNS-201ENST00000046640 SMYD4Q8IYR2 804 aaPredicted RBP14.98□□□□□ -0.01
CTNS-201ENST00000046640 RASGRP4Q8TDF6 673 aa14.98□□□□□ -0.01
CTNS-201ENST00000046640 TGFBRAP1Q8WUH2 860 aa14.98□□□□□ -0.01
CTNS-201ENST00000046640 MYH13Q9UKX3 1938 aa14.98□□□□□ -0.01
CTNS-201ENST00000046640 PRPF3O43395 683 aaKnown RBP14.98□□□□□ -0.01
CTNS-201ENST00000046640 LDHBP07195 334 aaKnown RBP14.98□□□□□ -0.01
CTNS-201ENST00000046640 SLFN14P0C7P3 912 aa14.98□□□□□ -0.01
CTNS-201ENST00000046640 CDK11BP21127 795 aaKnown RBP14.98□□□□□ -0.01
CTNS-201ENST00000046640 STX17P56962 302 aa14.98□□□□□ -0.01
CTNS-201ENST00000046640 TMTC3Q6ZXV5 915 aa14.98□□□□□ -0.01
CTNS-201ENST00000046640 MAPKAPK5Q8IW41 473 aa14.98□□□□□ -0.01
CTNS-201ENST00000046640 STAG2Q8N3U4 1231 aa14.98□□□□□ -0.01
CTNS-201ENST00000046640 SMARCE1Q969G3 411 aa14.98□□□□□ -0.01
CTNS-201ENST00000046640 CPVLQ9H3G5 476 aa14.98□□□□□ -0.01
CTNS-201ENST00000046640 SRPRBQ9Y5M8 271 aaKnown RBP14.98□□□□□ -0.01
CTNS-201ENST00000046640 LTBP4Q8N2S1 1624 aa14.98□□□□□ -0.01
CTNS-201ENST00000046640 MCM7P33993 719 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms