RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 PPP1R9BQ96SB3 815 aa13.72□□□□□ -0.21
CHPF2-201ENST00000035307 MYO1BO43795 1136 aa13.72□□□□□ -0.21
CHPF2-201ENST00000035307 NR5A1Q13285 461 aa13.72□□□□□ -0.21
CHPF2-201ENST00000035307 PRAMEF18Q5VWM3 479 aa13.72□□□□□ -0.21
CHPF2-201ENST00000035307 CCDC70Q6NSX1 233 aa13.72□□□□□ -0.21
CHPF2-201ENST00000035307 TBC1D16Q8TBP0 767 aa13.72□□□□□ -0.21
CHPF2-201ENST00000035307 CCDC12Q8WUD4 166 aaPredicted RBP13.72□□□□□ -0.21
CHPF2-201ENST00000035307 PLA2G12BQ9BX93 195 aa13.72□□□□□ -0.21
CHPF2-201ENST00000035307 PCDHA7Q9UN72 937 aa13.72□□□□□ -0.21
CHPF2-201ENST00000035307 KIF1AQ12756 1690 aa13.71□□□□□ -0.21
CHPF2-201ENST00000035307 DYNC1I1O14576 645 aa13.71□□□□□ -0.21
CHPF2-201ENST00000035307 NDUFA8P51970 172 aa13.71□□□□□ -0.21
CHPF2-201ENST00000035307 DLGAP5Q15398 846 aa13.71□□□□□ -0.21
CHPF2-201ENST00000035307 GRIK5Q16478 980 aa13.71□□□□□ -0.21
CHPF2-201ENST00000035307 LONRF3Q496Y0 759 aa13.71□□□□□ -0.21
CHPF2-201ENST00000035307 NSUN7Q8NE18 718 aaKnown RBP13.71□□□□□ -0.21
CHPF2-201ENST00000035307 ZNF526Q8TF50 670 aaPredicted RBP13.71□□□□□ -0.21
CHPF2-201ENST00000035307 PGBD1Q96JS3 809 aa13.71□□□□□ -0.21
CHPF2-201ENST00000035307 HOMER2Q9NSB8 354 aa13.71□□□□□ -0.21
CHPF2-201ENST00000035307 SEPT11Q9NVA2 429 aaKnown RBP13.71□□□□□ -0.21
CHPF2-201ENST00000035307 USP17L2Q6R6M4 530 aa13.71□□□□□ -0.21
CHPF2-201ENST00000035307 NIM1KQ8IY84 436 aa13.71□□□□□ -0.21
CHPF2-201ENST00000035307 KCNH3Q9ULD8 1083 aa13.71□□□□□ -0.21
CHPF2-201ENST00000035307 MTIF2P46199 727 aaKnown RBP13.71□□□□□ -0.22
CHPF2-201ENST00000035307 SLC27A3Q5K4L6 730 aa13.71□□□□□ -0.22
CHPF2-201ENST00000035307 AXDND1Q5T1B0 1012 aaPredicted RBP13.71□□□□□ -0.22
CHPF2-201ENST00000035307 RC3H1Q5TC82 1133 aaKnown RBP13.71□□□□□ -0.22
CHPF2-201ENST00000035307 PNMA1Q8ND90 353 aa13.71□□□□□ -0.22
CHPF2-201ENST00000035307 POLLQ9UGP5 575 aa13.71□□□□□ -0.22
CHPF2-201ENST00000035307 HDAC9Q9UKV0 1011 aa13.71□□□□□ -0.22
CHPF2-201ENST00000035307 ROBO1Q9Y6N7 1651 aa13.7□□□□□ -0.22
CHPF2-201ENST00000035307 NPR1P16066 1061 aa13.7□□□□□ -0.22
CHPF2-201ENST00000035307 MATR3P43243 847 aaKnown RBP eCLIP13.7□□□□□ -0.22
CHPF2-201ENST00000035307 SP4Q02446 784 aa13.7□□□□□ -0.22
CHPF2-201ENST00000035307 FANCBQ8NB91 859 aa13.7□□□□□ -0.22
CHPF2-201ENST00000035307 FLAD1Q8NFF5 587 aa13.7□□□□□ -0.22
CHPF2-201ENST00000035307 CNKSR1Q969H4 720 aa13.7□□□□□ -0.22
CHPF2-201ENST00000035307 ZSCAN10Q96SZ4 725 aaPredicted RBP13.7□□□□□ -0.22
CHPF2-201ENST00000035307 CENPHQ9H3R5 247 aa13.7□□□□□ -0.22
CHPF2-201ENST00000035307 EPB41L4AQ9HCS5 686 aaPredicted RBP13.7□□□□□ -0.22
CHPF2-201ENST00000035307 IBSPP21815 317 aaPredicted RBP13.7□□□□□ -0.22
CHPF2-201ENST00000035307 CDC25AP30304 524 aa13.7□□□□□ -0.22
CHPF2-201ENST00000035307 LETM2Q2VYF4 491 aa13.7□□□□□ -0.22
CHPF2-201ENST00000035307 CCDC84Q86UT8 332 aaPredicted RBP13.7□□□□□ -0.22
CHPF2-201ENST00000035307 MASTLQ96GX5 879 aa13.7□□□□□ -0.22
CHPF2-201ENST00000035307 TMEM87BQ96K49 555 aa13.7□□□□□ -0.22
CHPF2-201ENST00000035307 TRIM47Q96LD4 638 aa13.7□□□□□ -0.22
CHPF2-201ENST00000035307 CNTNAP4Q9C0A0 1308 aa13.7□□□□□ -0.22
CHPF2-201ENST00000035307 PLEKHA8P1O95397 391 aa13.7□□□□□ -0.22
CHPF2-201ENST00000035307 GSDMDP57764 484 aa13.7□□□□□ -0.22
CHPF2-201ENST00000035307 ARID5BQ14865 1188 aa13.7□□□□□ -0.22
CHPF2-201ENST00000035307 C11orf57Q6ZUT1 292 aaPredicted RBP13.7□□□□□ -0.22
CHPF2-201ENST00000035307 KRI1Q8N9T8 703 aaKnown RBP13.7□□□□□ -0.22
CHPF2-201ENST00000035307 CCDC102AQ96A19 550 aa13.7□□□□□ -0.22
CHPF2-201ENST00000035307 CASQ1P31415 396 aa13.69□□□□□ -0.22
CHPF2-201ENST00000035307 PLS1Q14651 629 aa13.69□□□□□ -0.22
CHPF2-201ENST00000035307 ZFYVE27Q5T4F4 411 aa13.69□□□□□ -0.22
CHPF2-201ENST00000035307 DHX37Q8IY37 1157 aaKnown RBP13.69□□□□□ -0.22
CHPF2-201ENST00000035307 TMTC2Q8N394 836 aa13.69□□□□□ -0.22
CHPF2-201ENST00000035307 TTC14Q96N46 770 aa13.69□□□□□ -0.22
CHPF2-201ENST00000035307 CCP110O43303 1012 aa13.69□□□□□ -0.22
CHPF2-201ENST00000035307 PFKFB2O60825 505 aa13.69□□□□□ -0.22
CHPF2-201ENST00000035307 STAT6P42226 847 aa13.69□□□□□ -0.22
CHPF2-201ENST00000035307 TTLL6Q8N841 843 aa13.69□□□□□ -0.22
CHPF2-201ENST00000035307 XPO4Q9C0E2 1151 aaKnown RBP13.69□□□□□ -0.22
CHPF2-201ENST00000035307 MRVI1Q9Y6F6 885 aa13.69□□□□□ -0.22
CHPF2-201ENST00000035307 PFKFB1P16118 471 aa13.69□□□□□ -0.22
CHPF2-201ENST00000035307 PLCG2P16885 1265 aa13.69□□□□□ -0.22
CHPF2-201ENST00000035307 KCTD1Q719H9 257 aa13.69□□□□□ -0.22
CHPF2-201ENST00000035307 BRAPQ7Z569 592 aa13.69□□□□□ -0.22
CHPF2-201ENST00000035307 BLZF1Q9H2G9 400 aa13.69□□□□□ -0.22
CHPF2-201ENST00000035307 DCP1AQ9NPI6 582 aaPredicted RBP13.69□□□□□ -0.22
CHPF2-201ENST00000035307 CDC27P30260 824 aa13.68□□□□□ -0.22
CHPF2-201ENST00000035307 SLC15A2Q16348 729 aa13.68□□□□□ -0.22
CHPF2-201ENST00000035307 HS1BP3Q53T59 392 aa13.68□□□□□ -0.22
CHPF2-201ENST00000035307 TMCO3Q6UWJ1 677 aa13.68□□□□□ -0.22
CHPF2-201ENST00000035307 PAXIP1Q6ZW49 1069 aaPredicted RBP13.68□□□□□ -0.22
CHPF2-201ENST00000035307 VPS16Q9H269 839 aa13.68□□□□□ -0.22
CHPF2-201ENST00000035307 TOPAZ1Q8N9V7 1692 aa13.68□□□□□ -0.22
CHPF2-201ENST00000035307 TDRD12Q587J7 1177 aaKnown RBP13.68□□□□□ -0.22
CHPF2-201ENST00000035307 GRAMD1CQ8IYS0 662 aa13.68□□□□□ -0.22
CHPF2-201ENST00000035307 NSUN4Q96CB9 384 aaKnown RBP13.68□□□□□ -0.22
CHPF2-201ENST00000035307 ZSCAN12O43309 604 aa13.68□□□□□ -0.22
CHPF2-201ENST00000035307 PARP1P09874 1014 aaKnown RBP13.68□□□□□ -0.22
CHPF2-201ENST00000035307 U2AF2P26368 475 aaKnown RBP eCLIP13.68□□□□□ -0.22
CHPF2-201ENST00000035307 PRIMPOLQ96LW4 560 aa13.68□□□□□ -0.22
CHPF2-201ENST00000035307 RUFY1Q96T51 708 aa13.68□□□□□ -0.22
CHPF2-201ENST00000035307 BRIP1Q9BX63 1249 aa13.68□□□□□ -0.22
CHPF2-201ENST00000035307 MMRN2Q9H8L6 949 aa13.68□□□□□ -0.22
CHPF2-201ENST00000035307 TCP11L1Q9NUJ3 509 aa13.68□□□□□ -0.22
CHPF2-201ENST00000035307 ARID5AQ03989 594 aa13.67□□□□□ -0.22
CHPF2-201ENST00000035307 LLPHQ9BRT6 129 aaKnown RBP13.67□□□□□ -0.22
CHPF2-201ENST00000035307 KIF5CO60282 957 aa13.67□□□□□ -0.22
CHPF2-201ENST00000035307 TBC1D10BQ4KMP7 808 aaPredicted RBP13.67□□□□□ -0.22
CHPF2-201ENST00000035307 SORBS3O60504 671 aa13.67□□□□□ -0.22
CHPF2-201ENST00000035307 MYCNP04198 464 aaPredicted RBP13.67□□□□□ -0.22
CHPF2-201ENST00000035307 ARID4AP29374 1257 aaPredicted RBP13.67□□□□□ -0.22
CHPF2-201ENST00000035307 SLC1A4P43007 532 aa13.67□□□□□ -0.22
CHPF2-201ENST00000035307 PLCD1P51178 756 aa13.67□□□□□ -0.22
CHPF2-201ENST00000035307 FANCCQ00597 558 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms