RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 ADD3Q9UEY8 706 aaKnown RBP15.96■□□□□ 0.14
USH1C-201ENST00000005226 MAPK8IP1Q9UQF2 711 aa15.96■□□□□ 0.14
USH1C-201ENST00000005226 ATRNO75882 1429 aa15.95■□□□□ 0.14
USH1C-201ENST00000005226 SYNRGQ9UMZ2 1314 aa15.95■□□□□ 0.14
USH1C-201ENST00000005226 ERICH2A1L162 156 aa15.95■□□□□ 0.14
USH1C-201ENST00000005226 CUL4BQ13620 913 aa15.95■□□□□ 0.14
USH1C-201ENST00000005226 PUM3Q15397 648 aaKnown RBP15.95■□□□□ 0.14
USH1C-201ENST00000005226 SRGAP1Q7Z6B7 1085 aa15.95■□□□□ 0.14
USH1C-201ENST00000005226 SPATA20Q8TB22 786 aa15.95■□□□□ 0.14
USH1C-201ENST00000005226 LPIN2Q92539 896 aa15.95■□□□□ 0.14
USH1C-201ENST00000005226 VPS16Q9H269 839 aa15.95■□□□□ 0.14
USH1C-201ENST00000005226 PDE11AQ9HCR9 933 aa15.95■□□□□ 0.14
USH1C-201ENST00000005226 V9GY48 417 aaPredicted RBP15.95■□□□□ 0.14
USH1C-201ENST00000005226 TNS3Q68CZ2 1445 aa15.95■□□□□ 0.14
USH1C-201ENST00000005226 WTIPA6NIX2 430 aaPredicted RBP15.95■□□□□ 0.14
USH1C-201ENST00000005226 TRIM75PA6NK02 468 aa15.95■□□□□ 0.14
USH1C-201ENST00000005226 ERCC5P28715 1186 aaPredicted RBP15.95■□□□□ 0.14
USH1C-201ENST00000005226 LMAN1P49257 510 aa15.95■□□□□ 0.14
USH1C-201ENST00000005226 RGS22Q8NE09 1264 aa15.95■□□□□ 0.14
USH1C-201ENST00000005226 SLC4A9Q96Q91 983 aa15.95■□□□□ 0.14
USH1C-201ENST00000005226 PANX2Q96RD6 677 aa15.95■□□□□ 0.14
USH1C-201ENST00000005226 ADAM21Q9UKJ8 722 aa15.95■□□□□ 0.14
USH1C-201ENST00000005226 CTNND2Q9UQB3 1225 aa15.95■□□□□ 0.14
USH1C-201ENST00000005226 ZBTB1Q9Y2K1 713 aa15.95■□□□□ 0.14
USH1C-201ENST00000005226 PPP1R3GB7ZBB8 358 aa15.94■□□□□ 0.14
USH1C-201ENST00000005226 ATP8B1O43520 1251 aa15.94■□□□□ 0.14
USH1C-201ENST00000005226 KIF5CO60282 957 aa15.94■□□□□ 0.14
USH1C-201ENST00000005226 PLEKHA8P1O95397 391 aa15.94■□□□□ 0.14
USH1C-201ENST00000005226 STARD3NLO95772 234 aa15.94■□□□□ 0.14
USH1C-201ENST00000005226 GYPCP04921 128 aa15.94■□□□□ 0.14
USH1C-201ENST00000005226 FGFR2P21802 821 aa15.94■□□□□ 0.14
USH1C-201ENST00000005226 GTF2E1P29083 439 aaPredicted RBP15.94■□□□□ 0.14
USH1C-201ENST00000005226 ADGRA1Q86SQ6 560 aa15.94■□□□□ 0.14
USH1C-201ENST00000005226 ELOA2Q8IYF1 753 aaPredicted RBP15.94■□□□□ 0.14
USH1C-201ENST00000005226 ZNF579Q8NAF0 562 aaKnown RBP15.94■□□□□ 0.14
USH1C-201ENST00000005226 CNNM2Q9H8M5 875 aa15.94■□□□□ 0.14
USH1C-201ENST00000005226 ADAMTS3O15072 1205 aa15.94■□□□□ 0.14
USH1C-201ENST00000005226 EVA1CP58658 441 aa15.94■□□□□ 0.14
USH1C-201ENST00000005226 SART3Q15020 963 aaKnown RBP15.94■□□□□ 0.14
USH1C-201ENST00000005226 TRIML1Q8N9V2 468 aa15.94■□□□□ 0.14
USH1C-201ENST00000005226 UBAC1Q9BSL1 405 aa15.94■□□□□ 0.14
USH1C-201ENST00000005226 BAZ2BQ9UIF8 2168 aaKnown RBP15.94■□□□□ 0.14
USH1C-201ENST00000005226 CDHR2Q9BYE9 1310 aa15.93■□□□□ 0.14
USH1C-201ENST00000005226 MFAP3LO75121 409 aa15.93■□□□□ 0.14
USH1C-201ENST00000005226 FAM193AP78312 1265 aa15.93■□□□□ 0.14
USH1C-201ENST00000005226 RAD51AP2Q09MP3 1159 aa15.93■□□□□ 0.14
USH1C-201ENST00000005226 PKN1Q16512 942 aa15.93■□□□□ 0.14
USH1C-201ENST00000005226 STAG1Q8WVM7 1258 aa15.93■□□□□ 0.14
USH1C-201ENST00000005226 ABCB6Q9NP58 842 aa15.93■□□□□ 0.14
USH1C-201ENST00000005226 CDC23Q9UJX2 597 aa15.93■□□□□ 0.14
USH1C-201ENST00000005226 TFR2Q9UP52 801 aa15.93■□□□□ 0.14
USH1C-201ENST00000005226 PDE8AO60658 829 aa15.93■□□□□ 0.14
USH1C-201ENST00000005226 PBX1P40424 430 aa15.93■□□□□ 0.14
USH1C-201ENST00000005226 ERVK-24P63145 666 aa15.93■□□□□ 0.14
USH1C-201ENST00000005226 EVX2Q03828 476 aa15.93■□□□□ 0.14
USH1C-201ENST00000005226 KANK3Q6NY19 840 aa15.93■□□□□ 0.14
USH1C-201ENST00000005226 RNF216Q9NWF9 866 aaPredicted RBP15.93■□□□□ 0.14
USH1C-201ENST00000005226 TAB2Q9NYJ8 693 aa15.93■□□□□ 0.14
USH1C-201ENST00000005226 LRP2BPQ9P2M1 347 aa15.93■□□□□ 0.14
USH1C-201ENST00000005226 TRIM10Q9UDY6 481 aa15.93■□□□□ 0.14
USH1C-201ENST00000005226 TNKSO95271 1327 aa15.92■□□□□ 0.14
USH1C-201ENST00000005226 AKAP17AQ02040 695 aaKnown RBP15.92■□□□□ 0.14
USH1C-201ENST00000005226 CDKAL1Q5VV42 579 aa15.92■□□□□ 0.14
USH1C-201ENST00000005226 SLF1Q9BQI6 1058 aa15.92■□□□□ 0.14
USH1C-201ENST00000005226 VPS18Q9P253 973 aa15.92■□□□□ 0.14
USH1C-201ENST00000005226 ABCF2Q9UG63 623 aa15.92■□□□□ 0.14
USH1C-201ENST00000005226 CEP131Q9UPN4 1083 aa15.92■□□□□ 0.14
USH1C-201ENST00000005226 PHACTR2O75167 634 aa15.92■□□□□ 0.14
USH1C-201ENST00000005226 PPARAQ07869 468 aa15.92■□□□□ 0.14
USH1C-201ENST00000005226 BEND6Q5SZJ8 279 aaPredicted RBP15.92■□□□□ 0.14
USH1C-201ENST00000005226 NACAP1Q9BZK3 213 aa15.92■□□□□ 0.14
USH1C-201ENST00000005226 LCMT1Q9UIC8 334 aa15.92■□□□□ 0.14
USH1C-201ENST00000005226 UBR2Q8IWV8 1755 aa15.92■□□□□ 0.14
USH1C-201ENST00000005226 TNS2Q63HR2 1409 aa15.92■□□□□ 0.14
USH1C-201ENST00000005226 CCDC151A5D8V7 595 aa15.91■□□□□ 0.14
USH1C-201ENST00000005226 TULP2O00295 520 aa15.91■□□□□ 0.14
USH1C-201ENST00000005226 SLC5A1P13866 664 aa15.91■□□□□ 0.14
USH1C-201ENST00000005226 VEGFAP15692 232 aaPredicted RBP15.91■□□□□ 0.14
USH1C-201ENST00000005226 JAKMIP3Q5VZ66 844 aa15.91■□□□□ 0.14
USH1C-201ENST00000005226 RRAGBQ5VZM2 374 aa15.91■□□□□ 0.14
USH1C-201ENST00000005226 SH3RF1Q7Z6J0 888 aa15.91■□□□□ 0.14
USH1C-201ENST00000005226 TXLNBQ8N3L3 684 aa15.91■□□□□ 0.14
USH1C-201ENST00000005226 AATFQ9NY61 560 aaKnown RBP eCLIP15.91■□□□□ 0.14
USH1C-201ENST00000005226 MAP2K7O14733 419 aa15.91■□□□□ 0.14
USH1C-201ENST00000005226 N4BP3O15049 544 aa15.91■□□□□ 0.14
USH1C-201ENST00000005226 CYP7A1P22680 504 aa15.91■□□□□ 0.14
USH1C-201ENST00000005226 VSNL1P62760 191 aa15.91■□□□□ 0.14
USH1C-201ENST00000005226 KRT31Q15323 416 aa15.91■□□□□ 0.14
USH1C-201ENST00000005226 ZSCAN26Q16670 478 aa15.91■□□□□ 0.14
USH1C-201ENST00000005226 RASGRP2Q7LDG7 609 aa15.91■□□□□ 0.14
USH1C-201ENST00000005226 NOA1Q8NC60 698 aaKnown RBP15.91■□□□□ 0.14
USH1C-201ENST00000005226 CCDC196A0A1B0GTZ2 297 aa15.9■□□□□ 0.14
USH1C-201ENST00000005226 PTGDRQ13258 359 aa15.9■□□□□ 0.14
USH1C-201ENST00000005226 NCAPH2Q6IBW4 605 aa15.9■□□□□ 0.14
USH1C-201ENST00000005226 CHP1Q99653 195 aa15.9■□□□□ 0.14
USH1C-201ENST00000005226 CTAGE9A4FU28 777 aa15.9■□□□□ 0.14
USH1C-201ENST00000005226 KRT2P35908 639 aa15.9■□□□□ 0.14
USH1C-201ENST00000005226 BRD3Q15059 726 aa15.9■□□□□ 0.14
USH1C-201ENST00000005226 FILIP1LQ4L180 1135 aa15.9■□□□□ 0.14
USH1C-201ENST00000005226 NUP88Q99567 741 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms