RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 A430078G23RikE9Q7Y4 484 aa8.65□□□□□ -1.02
Usp40-204ENSMUST00000187758 Mdh1bQ5F204 500 aa8.65□□□□□ -1.02
Usp40-204ENSMUST00000187758 WaplQ65Z40 1200 aaKnown RBP8.65□□□□□ -1.02
Usp40-204ENSMUST00000187758 Ddrgk1Q80WW9 315 aa8.65□□□□□ -1.02
Usp40-204ENSMUST00000187758 Ppp1r11Q8K1L5 131 aa8.65□□□□□ -1.02
Usp40-204ENSMUST00000187758 Ttll1Q91V51 423 aa8.65□□□□□ -1.02
Usp40-204ENSMUST00000187758 Kif3aP28741 701 aa8.65□□□□□ -1.03
Usp40-204ENSMUST00000187758 Kif4P33174 1231 aa8.65□□□□□ -1.03
Usp40-204ENSMUST00000187758 Armc2Q3URY6 854 aa8.65□□□□□ -1.03
Usp40-204ENSMUST00000187758 Slc27a1Q60714 646 aa8.65□□□□□ -1.03
Usp40-204ENSMUST00000187758 Stk38Q91VJ4 465 aa8.65□□□□□ -1.03
Usp40-204ENSMUST00000187758 Lzts2Q91YU6 671 aa8.65□□□□□ -1.03
Usp40-204ENSMUST00000187758 Bicd2Q921C5 820 aa8.65□□□□□ -1.03
Usp40-204ENSMUST00000187758 Zfp646Q6NV66 1788 aa8.65□□□□□ -1.03
Usp40-204ENSMUST00000187758 Dock5B2RY04 1868 aa8.65□□□□□ -1.03
Usp40-204ENSMUST00000187758 Ltbp2O08999 1813 aa8.65□□□□□ -1.03
Usp40-204ENSMUST00000187758 Gm30191A0A0U1RNT7 187 aa8.64□□□□□ -1.03
Usp40-204ENSMUST00000187758 Clrn2B2RVW2 232 aa8.64□□□□□ -1.03
Usp40-204ENSMUST00000187758 Nfil3O08750 462 aa8.64□□□□□ -1.03
Usp40-204ENSMUST00000187758 Pcmtd1P59913 357 aa8.64□□□□□ -1.03
Usp40-204ENSMUST00000187758 Kmt5bQ3U8K7 883 aa8.64□□□□□ -1.03
Usp40-204ENSMUST00000187758 Ces3aQ63880 571 aa8.64□□□□□ -1.03
Usp40-204ENSMUST00000187758 Ces3bQ8VCU1 571 aa8.64□□□□□ -1.03
Usp40-204ENSMUST00000187758 MyrflQ3UN70 904 aa8.64□□□□□ -1.03
Usp40-204ENSMUST00000187758 CrebrfQ8CDG5 640 aaKnown RBP8.64□□□□□ -1.03
Usp40-204ENSMUST00000187758 Tnip1Q9WUU8 647 aa8.64□□□□□ -1.03
Usp40-204ENSMUST00000187758 Zbtb22Q9Z0G7 638 aa8.64□□□□□ -1.03
Usp40-204ENSMUST00000187758 Klrc1Q9Z202 244 aa8.64□□□□□ -1.03
Usp40-204ENSMUST00000187758 Peak1Q69Z38 1735 aa8.64□□□□□ -1.03
Usp40-204ENSMUST00000187758 Stag2O35638 1231 aa8.64□□□□□ -1.03
Usp40-204ENSMUST00000187758 Cd22P35329 862 aa8.64□□□□□ -1.03
Usp40-204ENSMUST00000187758 Mmp14P53690 582 aa8.64□□□□□ -1.03
Usp40-204ENSMUST00000187758 Qrich1Q3UA37 777 aa8.64□□□□□ -1.03
Usp40-204ENSMUST00000187758 Zbtb39Q6PDK0 712 aa8.64□□□□□ -1.03
Usp40-204ENSMUST00000187758 OplahQ8K010 1288 aa8.64□□□□□ -1.03
Usp40-204ENSMUST00000187758 Arhgef6Q8K4I3 771 aa8.64□□□□□ -1.03
Usp40-204ENSMUST00000187758 Med4Q9CQA5 270 aa8.64□□□□□ -1.03
Usp40-204ENSMUST00000187758 Tgm5Q9D7I9 724 aa8.64□□□□□ -1.03
Usp40-204ENSMUST00000187758 Tfcp2Q9ERA0 502 aa8.64□□□□□ -1.03
Usp40-204ENSMUST00000187758 Wnt10bP48614 389 aa8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 Eme2Q56A04 373 aa8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 Haus6Q6NV99 933 aaKnown RBP8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 Samm50Q8BGH2 469 aa8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 Trappc12Q8K2L8 797 aa8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 Nop2Q922K7 793 aaKnown RBP8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 SmapQ9R0P4 181 aaKnown RBP8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 Sel1lQ9Z2G6 790 aa8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 Gm28047Q3US59 414 aa8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 Tut1Q8R3F9 869 aa8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 Apbb1ipQ8R5A3 670 aa8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 Lman1lQ8VCD3 505 aa8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 Gbp7Q91Z40 638 aa8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 Homer1Q9Z2Y3 366 aa8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 Ccdc112A0AUP1 442 aa8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 Sema3eP70275 775 aa8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 Zc3h15Q3TIV5 426 aaKnown RBP8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 Tmem39bQ810L4 492 aa8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 Kiaa1524Q8BWY9 907 aa8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 Eid1Q9DCR4 169 aa8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 Tfap4Q9JIZ5 338 aa8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 Ccng2O08918 344 aa8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 Cyp3a25O09158 503 aa8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 CfhP06909 1234 aa8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 Sept2P42208 361 aaKnown RBP8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 Kdm4aQ8BW72 1064 aa8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 Cdan1Q8CC12 1239 aa8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 Pdlim2Q8R1G6 349 aa8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 Ndufa8Q9DCJ5 172 aa8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 Tmod2Q9JKK7 351 aa8.63□□□□□ -1.03
Usp40-204ENSMUST00000187758 Pfkfb3A7UAK5 555 aa8.62□□□□□ -1.03
Usp40-204ENSMUST00000187758 Nsrp1Q5NCR9 542 aa8.62□□□□□ -1.03
Usp40-204ENSMUST00000187758 Tmx3Q8BXZ1 456 aa8.62□□□□□ -1.03
Usp40-204ENSMUST00000187758 Tmem79Q9D709 391 aa8.62□□□□□ -1.03
Usp40-204ENSMUST00000187758 Ampd3O08739 766 aa8.62□□□□□ -1.03
Usp40-204ENSMUST00000187758 Sap30bpQ02614 308 aa8.62□□□□□ -1.03
Usp40-204ENSMUST00000187758 Psen2Q61144 448 aa8.62□□□□□ -1.03
Usp40-204ENSMUST00000187758 Lca5Q80ST9 704 aa8.62□□□□□ -1.03
Usp40-204ENSMUST00000187758 Gpatch3Q8BIY1 525 aa8.62□□□□□ -1.03
Usp40-204ENSMUST00000187758 Riox2Q8CD15 465 aa8.62□□□□□ -1.03
Usp40-204ENSMUST00000187758 Naa30Q8CES0 364 aa8.62□□□□□ -1.03
Usp40-204ENSMUST00000187758 Ndfip2Q91ZP6 311 aa8.62□□□□□ -1.03
Usp40-204ENSMUST00000187758 Tob2Q9JM55 345 aa8.62□□□□□ -1.03
Usp40-204ENSMUST00000187758 Mical3Q8CJ19 1993 aa8.62□□□□□ -1.03
Usp40-204ENSMUST00000187758 Lnx1O70263 728 aa8.62□□□□□ -1.03
Usp40-204ENSMUST00000187758 Tpm2P58774 284 aa8.62□□□□□ -1.03
Usp40-204ENSMUST00000187758 Klrg2Q3UM83 387 aa8.62□□□□□ -1.03
Usp40-204ENSMUST00000187758 Usp28Q5I043 1051 aa8.62□□□□□ -1.03
Usp40-204ENSMUST00000187758 Slc9c1Q6UJY2 1175 aa8.62□□□□□ -1.03
Usp40-204ENSMUST00000187758 Galnt17Q7TT15 598 aa8.62□□□□□ -1.03
Usp40-204ENSMUST00000187758 Vps37dQ810I0 261 aa8.62□□□□□ -1.03
Usp40-204ENSMUST00000187758 Smc2Q8CG48 1191 aaKnown RBP8.62□□□□□ -1.03
Usp40-204ENSMUST00000187758 SltmQ8CH25 1031 aaKnown RBP8.62□□□□□ -1.03
Usp40-204ENSMUST00000187758 Ppil2Q9D787 521 aa8.62□□□□□ -1.03
Usp40-204ENSMUST00000187758 Palm3A2TJV2 734 aa8.61□□□□□ -1.03
Usp40-204ENSMUST00000187758 Myo19Q5SV80 963 aa8.61□□□□□ -1.03
Usp40-204ENSMUST00000187758 Scfd1Q8BRF7 639 aaKnown RBP8.61□□□□□ -1.03
Usp40-204ENSMUST00000187758 Sec62Q8BU14 398 aaKnown RBP8.61□□□□□ -1.03
Usp40-204ENSMUST00000187758 Col4a3bpQ9EQG9 624 aa8.61□□□□□ -1.03
Usp40-204ENSMUST00000187758 Dpp7Q9ET22 506 aa8.61□□□□□ -1.03
Usp40-204ENSMUST00000187758 Plxnb2B2RXS4 1842 aa8.61□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 36.6 ms