RNA–Protein interactions for RNA: ENSMUST00000172711.1

Trim40-203, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim40, Length 1,539 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-203ENSMUST00000172711 Ppm1gQ61074 542 aa9.79□□□□□ -0.84
Trim40-203ENSMUST00000172711 Tpd52Q62393 224 aa9.79□□□□□ -0.84
Trim40-203ENSMUST00000172711 Ddx11Q6AXC6 880 aa9.79□□□□□ -0.84
Trim40-203ENSMUST00000172711 Tbc1d10bQ8BHL3 798 aa9.79□□□□□ -0.84
Trim40-203ENSMUST00000172711 Fsd2Q8BZ52 692 aa9.79□□□□□ -0.84
Trim40-203ENSMUST00000172711 Adgra1Q8C4G9 578 aa9.79□□□□□ -0.84
Trim40-203ENSMUST00000172711 E2f4Q8R0K9 410 aa9.79□□□□□ -0.84
Trim40-203ENSMUST00000172711 Iffo2Q8R2V2 512 aa9.79□□□□□ -0.84
Trim40-203ENSMUST00000172711 Ttc8Q8VD72 515 aa9.79□□□□□ -0.84
Trim40-203ENSMUST00000172711 HlcsQ920N2 722 aa9.79□□□□□ -0.84
Trim40-203ENSMUST00000172711 Bco2Q99NF1 532 aa9.79□□□□□ -0.84
Trim40-203ENSMUST00000172711 Sapcd2Q9D818 391 aa9.79□□□□□ -0.84
Trim40-203ENSMUST00000172711 Cxcl11Q9JHH5 100 aa9.79□□□□□ -0.84
Trim40-203ENSMUST00000172711 Kiaa1211Q5PR69 1207 aa9.78□□□□□ -0.84
Trim40-203ENSMUST00000172711 Znf516Q7TSH3 1157 aa9.78□□□□□ -0.84
Trim40-203ENSMUST00000172711 Ero1aQ8R180 464 aa9.78□□□□□ -0.84
Trim40-203ENSMUST00000172711 Ptcd2Q8R3K3 381 aaKnown RBP9.78□□□□□ -0.84
Trim40-203ENSMUST00000172711 Bag3Q9JLV1 577 aaKnown RBP9.78□□□□□ -0.84
Trim40-203ENSMUST00000172711 Plxnb3Q9QY40 1902 aa9.78□□□□□ -0.84
Trim40-203ENSMUST00000172711 Myo15bI7HPW8 3033 aa9.78□□□□□ -0.84
Trim40-203ENSMUST00000172711 Cyp2d9P11714 504 aa9.77□□□□□ -0.84
Trim40-203ENSMUST00000172711 Fgfr2P21803 821 aa9.77□□□□□ -0.84
Trim40-203ENSMUST00000172711 Sept2P42208 361 aaKnown RBP9.77□□□□□ -0.84
Trim40-203ENSMUST00000172711 Mrgprb1Q3UG61 350 aa9.77□□□□□ -0.84
Trim40-203ENSMUST00000172711 Cyp26b1Q811W2 512 aa9.77□□□□□ -0.84
Trim40-203ENSMUST00000172711 Fam13aQ8BGI4 693 aa9.77□□□□□ -0.84
Trim40-203ENSMUST00000172711 Scfd2Q8BTY8 684 aa9.77□□□□□ -0.84
Trim40-203ENSMUST00000172711 Rbm28Q8CGC6 750 aaKnown RBP9.77□□□□□ -0.84
Trim40-203ENSMUST00000172711 Slc18a1Q8R090 521 aa9.77□□□□□ -0.84
Trim40-203ENSMUST00000172711 Pqbp1Q91VJ5 263 aaKnown RBP9.77□□□□□ -0.84
Trim40-203ENSMUST00000172711 Pold4Q9CWP8 107 aa9.77□□□□□ -0.84
Trim40-203ENSMUST00000172711 Sart3Q9JLI8 962 aaKnown RBP9.77□□□□□ -0.84
Trim40-203ENSMUST00000172711 Usp31E9Q6Y8 1344 aa9.77□□□□□ -0.85
Trim40-203ENSMUST00000172711 Sema3fO88632 785 aa9.77□□□□□ -0.85
Trim40-203ENSMUST00000172711 NpeppsQ11011 920 aa9.77□□□□□ -0.85
Trim40-203ENSMUST00000172711 Fam109bQ14B98 259 aa9.77□□□□□ -0.85
Trim40-203ENSMUST00000172711 Zfp957Q3UT76 567 aa9.77□□□□□ -0.85
Trim40-203ENSMUST00000172711 Eme2Q56A04 373 aa9.77□□□□□ -0.85
Trim40-203ENSMUST00000172711 Mctp2Q5RJH2 878 aa9.77□□□□□ -0.85
Trim40-203ENSMUST00000172711 Ccdc85aQ5SP85 500 aa9.77□□□□□ -0.85
Trim40-203ENSMUST00000172711 Gigyf2Q6Y7W8 1291 aaKnown RBP9.77□□□□□ -0.85
Trim40-203ENSMUST00000172711 Golim4Q8BXA1 655 aa9.77□□□□□ -0.85
Trim40-203ENSMUST00000172711 E4f1Q8CCE9 783 aa9.77□□□□□ -0.85
Trim40-203ENSMUST00000172711 Vta1Q9CR26 309 aa9.77□□□□□ -0.85
Trim40-203ENSMUST00000172711 Dynll2Q9D0M5 89 aa9.77□□□□□ -0.85
Trim40-203ENSMUST00000172711 PfkpQ9WUA3 784 aaKnown RBP9.77□□□□□ -0.85
Trim40-203ENSMUST00000172711 Col2a1P28481 1487 aa9.76□□□□□ -0.85
Trim40-203ENSMUST00000172711 Gm36210A0A1B0GS00 229 aa9.76□□□□□ -0.85
Trim40-203ENSMUST00000172711 Rexo5D3YW29 759 aa9.76□□□□□ -0.85
Trim40-203ENSMUST00000172711 Mcmdc2E9Q956 681 aa9.76□□□□□ -0.85
Trim40-203ENSMUST00000172711 PrkcshO08795 521 aa9.76□□□□□ -0.85
Trim40-203ENSMUST00000172711 AoahO35298 574 aa9.76□□□□□ -0.85
Trim40-203ENSMUST00000172711 Nploc4P60670 608 aa9.76□□□□□ -0.85
Trim40-203ENSMUST00000172711 Atp11aP98197 1187 aa9.76□□□□□ -0.85
Trim40-203ENSMUST00000172711 Aak1Q3UHJ0 959 aa9.76□□□□□ -0.85
Trim40-203ENSMUST00000172711 Prpf38aQ4FK66 312 aaKnown RBP9.76□□□□□ -0.85
Trim40-203ENSMUST00000172711 Ddx4Q61496 702 aa9.76□□□□□ -0.85
Trim40-203ENSMUST00000172711 Sp4Q62445 782 aa9.76□□□□□ -0.85
Trim40-203ENSMUST00000172711 Kank4Q6P9J5 1016 aa9.76□□□□□ -0.85
Trim40-203ENSMUST00000172711 Prr11Q8BHE0 368 aa9.76□□□□□ -0.85
Trim40-203ENSMUST00000172711 Olfm5Q8BU90 496 aa9.76□□□□□ -0.85
Trim40-203ENSMUST00000172711 MlphQ91V27 590 aa9.76□□□□□ -0.85
Trim40-203ENSMUST00000172711 Eif2s2Q99L45 331 aaKnown RBP9.76□□□□□ -0.85
Trim40-203ENSMUST00000172711 Nphp1Q9QY53 687 aa9.76□□□□□ -0.85
Trim40-203ENSMUST00000172711 TicrrQ8BQ33 1889 aa9.76□□□□□ -0.85
Trim40-203ENSMUST00000172711 Gm3138K7N754 218 aa9.75□□□□□ -0.85
Trim40-203ENSMUST00000172711 DcxO88809 366 aa9.75□□□□□ -0.85
Trim40-203ENSMUST00000172711 TxnP10639 105 aaKnown RBP9.75□□□□□ -0.85
Trim40-203ENSMUST00000172711 NcanP55066 1268 aa9.75□□□□□ -0.85
Trim40-203ENSMUST00000172711 Sema3eP70275 775 aa9.75□□□□□ -0.85
Trim40-203ENSMUST00000172711 Znf692Q3U381 531 aa9.75□□□□□ -0.85
Trim40-203ENSMUST00000172711 Kcnq3Q8K3F6 873 aa9.75□□□□□ -0.85
Trim40-203ENSMUST00000172711 Prkab1Q9R078 270 aa9.75□□□□□ -0.85
Trim40-203ENSMUST00000172711 Mia3Q8BI84 1930 aa9.75□□□□□ -0.85
Trim40-203ENSMUST00000172711 Aox3G3X982 1335 aa9.74□□□□□ -0.85
Trim40-203ENSMUST00000172711 Celf5D3Z4T1 395 aaKnown RBP9.74□□□□□ -0.85
Trim40-203ENSMUST00000172711 Tff2Q03404 129 aa9.74□□□□□ -0.85
Trim40-203ENSMUST00000172711 VrtnQ3SYK4 740 aa9.74□□□□□ -0.85
Trim40-203ENSMUST00000172711 Esyt3Q5DTI8 891 aa9.74□□□□□ -0.85
Trim40-203ENSMUST00000172711 Cyp2c29Q64458 490 aa9.74□□□□□ -0.85
Trim40-203ENSMUST00000172711 Dpp9Q8BVG4 862 aa9.74□□□□□ -0.85
Trim40-203ENSMUST00000172711 Sf3a1Q8K4Z5 791 aaKnown RBP9.74□□□□□ -0.85
Trim40-203ENSMUST00000172711 Pcdhgc5Q91XW9 944 aa9.74□□□□□ -0.85
Trim40-203ENSMUST00000172711 Ccdc39Q9D5Y1 937 aa9.74□□□□□ -0.85
Trim40-203ENSMUST00000172711 Parp2O88554 559 aa9.73□□□□□ -0.85
Trim40-203ENSMUST00000172711 CenpbP27790 599 aa9.73□□□□□ -0.85
Trim40-203ENSMUST00000172711 Samd11Q1RNF8 542 aa9.73□□□□□ -0.85
Trim40-203ENSMUST00000172711 Fam228bQ497Q6 232 aa9.73□□□□□ -0.85
Trim40-203ENSMUST00000172711 Il17raQ60943 864 aa9.73□□□□□ -0.85
Trim40-203ENSMUST00000172711 Zcchc14Q8VIG0 956 aa9.73□□□□□ -0.85
Trim40-203ENSMUST00000172711 Srgap1Q91Z69 1062 aa9.73□□□□□ -0.85
Trim40-203ENSMUST00000172711 Smarca5Q91ZW3 1051 aaKnown RBP9.73□□□□□ -0.85
Trim40-203ENSMUST00000172711 HibadhQ99L13 335 aaKnown RBP9.73□□□□□ -0.85
Trim40-203ENSMUST00000172711 Ppil4Q9CXG3 492 aaKnown RBP9.73□□□□□ -0.85
Trim40-203ENSMUST00000172711 Pus3Q9JI38 481 aa9.73□□□□□ -0.85
Trim40-203ENSMUST00000172711 Usp14Q9JMA1 493 aaKnown RBP9.73□□□□□ -0.85
Trim40-203ENSMUST00000172711 Bcl11aQ9QYE3 773 aa9.73□□□□□ -0.85
Trim40-203ENSMUST00000172711 Pdcd6ipQ9WU78 869 aaKnown RBP9.73□□□□□ -0.85
Trim40-203ENSMUST00000172711 FAM186AQ9D9R9 1790 aa9.73□□□□□ -0.85
Trim40-203ENSMUST00000172711 Fam186bD3Z420 943 aa9.72□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 50.2 ms