RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Rad51ap2G3UW63 976 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Dapk3O54784 448 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Exoc5Q3TPX4 708 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Q3TYL0 343 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Pcdhb14Q6PB90 796 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Nat10Q8K224 1024 aaKnown RBP7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Sf3b3Q921M3 1217 aaKnown RBP7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Cnpy3Q9DAU1 276 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Xpo4Q9ESJ0 1151 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 EcsitQ9QZH6 435 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Ccne2Q9Z238 404 aa7.1□□□□□ -1.27
Lig4-202ENSMUST00000170033 Pnpla6Q3TRM4 1355 aa7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 AW822073A0A0N4SUK1 652 aa7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 Prr5lA2AVJ5 370 aa7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 Pcdh10E9PXQ7 1057 aa7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 Rbm46P86049 533 aa7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 Tubb5P99024 444 aaKnown RBP7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 Plekha7Q3UIL6 1118 aaKnown RBP7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 Krt40Q6IFX3 439 aa7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 Cspg5Q71M36 566 aa7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 Sptlc3Q8BG54 563 aa7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 Sirt2Q8VDQ8 389 aa7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 Prpf3Q922U1 683 aaKnown RBP7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 Tomm22Q9CPQ3 142 aa7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 Dph6Q9CQ28 267 aa7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 Rps6ka4Q9Z2B9 773 aa7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 Grin2dQ03391 1323 aa7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 Dennd3A2RT67 1274 aa7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 Skor2A7M7C7 1008 aa7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 Kif2aP28740 705 aa7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 Ric8aQ3TIR3 530 aa7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 Tbx2Q60707 711 aa7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 Esco1Q69Z69 843 aa7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 Luc7l2Q7TNC4 392 aaKnown RBP7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 Anks1bQ8BIZ1 1259 aa7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 Q8C4P0 716 aa7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 Rtn1Q8K0T0 780 aa7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 Golph3lQ8R088 285 aaKnown RBP7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 WtapQ9ER69 396 aa7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 Sel1lQ9Z2G6 790 aa7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 Homer1Q9Z2Y3 366 aa7.09□□□□□ -1.27
Lig4-202ENSMUST00000170033 Nhsl1Q8CAF4 1587 aa7.08□□□□□ -1.28
Lig4-202ENSMUST00000170033 Gm6370A0A0G2JGX9 315 aa7.08□□□□□ -1.28
Lig4-202ENSMUST00000170033 Lipo1J3QME6 396 aa7.08□□□□□ -1.28
Lig4-202ENSMUST00000170033 Gm6309L7N481 315 aa7.08□□□□□ -1.28
Lig4-202ENSMUST00000170033 Cyp3a25O09158 503 aa7.08□□□□□ -1.28
Lig4-202ENSMUST00000170033 Kif3cO35066 796 aa7.08□□□□□ -1.28
Lig4-202ENSMUST00000170033 Epha2Q03145 977 aa7.08□□□□□ -1.28
Lig4-202ENSMUST00000170033 Traf3ip1Q149C2 625 aa7.08□□□□□ -1.28
Lig4-202ENSMUST00000170033 Ap5z1Q3U829 807 aa7.08□□□□□ -1.28
Lig4-202ENSMUST00000170033 Klra3Q64329 266 aa7.08□□□□□ -1.28
Lig4-202ENSMUST00000170033 Cyp7a1Q64505 503 aa7.08□□□□□ -1.28
Lig4-202ENSMUST00000170033 Klhl40Q9D783 621 aa7.08□□□□□ -1.28
Lig4-202ENSMUST00000170033 Cfap45Q9D9U9 551 aa7.08□□□□□ -1.28
Lig4-202ENSMUST00000170033 Capn10Q9ESK3 666 aa7.08□□□□□ -1.28
Lig4-202ENSMUST00000170033 Scnn1bQ9WU38 638 aa7.08□□□□□ -1.28
Lig4-202ENSMUST00000170033 Snx1Q9WV80 522 aa7.08□□□□□ -1.28
Lig4-202ENSMUST00000170033 Kcnh3Q9WVJ0 1095 aa7.08□□□□□ -1.28
Lig4-202ENSMUST00000170033 Znf638Q61464 1960 aaKnown RBP7.08□□□□□ -1.28
Lig4-202ENSMUST00000170033 Dnai2A2AC93 623 aa7.08□□□□□ -1.28
Lig4-202ENSMUST00000170033 Cyp2d9P11714 504 aa7.08□□□□□ -1.28
Lig4-202ENSMUST00000170033 Esyt2Q3TZZ7 845 aa7.08□□□□□ -1.28
Lig4-202ENSMUST00000170033 Atp1a3Q6PIC6 1013 aa7.08□□□□□ -1.28
Lig4-202ENSMUST00000170033 Cfap69Q8BH53 942 aa7.08□□□□□ -1.28
Lig4-202ENSMUST00000170033 GptQ8QZR5 496 aa7.08□□□□□ -1.28
Lig4-202ENSMUST00000170033 Sytl4Q9R0Q1 673 aa7.08□□□□□ -1.28
Lig4-202ENSMUST00000170033 Arih1Q9Z1K5 555 aa7.08□□□□□ -1.28
Lig4-202ENSMUST00000170033 Letm1Q9Z2I0 738 aa7.08□□□□□ -1.28
Lig4-202ENSMUST00000170033 CluhQ5SW19 1315 aa7.08□□□□□ -1.28
Lig4-202ENSMUST00000170033 Calcoco2A2A6M5 331 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Zscan20B2KFW1 1030 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Cyp26c1B2RXA7 518 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 CrcpO35427 148 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Sec23aQ01405 765 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Klra9Q2TJJ8 266 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Nr6a1Q64249 495 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Ifit1Q64282 463 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Togaram1Q6A070 1776 aaKnown RBP7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Adck2Q6NSR3 617 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Ano6Q6P9J9 911 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 PodnQ7TQ62 611 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Asnsd1Q8BFS9 627 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Etf1Q8BWY3 437 aaKnown RBP7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Fam53cQ8BXQ8 393 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Slc24a5Q8C261 501 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Pde5aQ8CG03 865 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Rbm43Q99J64 343 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 CenpqQ9CPQ5 267 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Ctnnbl1Q9CWL8 563 aaKnown RBP7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Klra10Q9R1G6 266 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Col20a1Q923P0 1320 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Pramel3A2AHA7 463 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Gm7903A2AWL1 463 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 AV320801A2AWL3 467 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Gm15023L7MUB4 467 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Ercc3P49135 783 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Emc10Q3TAS6 258 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Rap1gap2Q5SVL6 712 aaKnown RBP7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 Olfr118Q7TRJ6 321 aa7.07□□□□□ -1.28
Lig4-202ENSMUST00000170033 ClasrpQ8CFC7 668 aa7.07□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms