RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 FAM186AQ9D9R9 1790 aa13.04□□□□□ -0.32
Vps54-202ENSMUST00000109578 Rsrc2A2RTL5 376 aaKnown RBP13.04□□□□□ -0.32
Vps54-202ENSMUST00000109578 Gm21969J3QJZ1 289 aa13.04□□□□□ -0.32
Vps54-202ENSMUST00000109578 Cdcp1Q5U462 833 aa13.04□□□□□ -0.32
Vps54-202ENSMUST00000109578 Nat10Q8K224 1024 aaKnown RBP13.04□□□□□ -0.32
Vps54-202ENSMUST00000109578 Pdcd6ipQ9WU78 869 aaKnown RBP13.04□□□□□ -0.32
Vps54-202ENSMUST00000109578 DccP70211 1447 aa13.04□□□□□ -0.32
Vps54-202ENSMUST00000109578 Scgb2b18A0A087WPA9 112 aa13.03□□□□□ -0.32
Vps54-202ENSMUST00000109578 RragbQ6NTA4 374 aa13.03□□□□□ -0.32
Vps54-202ENSMUST00000109578 Apol10aQ8CCA5 318 aa13.03□□□□□ -0.32
Vps54-202ENSMUST00000109578 Pcdhgc5Q91XW9 944 aa13.03□□□□□ -0.32
Vps54-202ENSMUST00000109578 Bcl11bQ99PV8 884 aa13.03□□□□□ -0.32
Vps54-202ENSMUST00000109578 Krtap5-3Q9D226 196 aa13.03□□□□□ -0.32
Vps54-202ENSMUST00000109578 Zfand4D3Z3C6 739 aa13.03□□□□□ -0.32
Vps54-202ENSMUST00000109578 Stx8O88983 236 aa13.03□□□□□ -0.32
Vps54-202ENSMUST00000109578 Rad23aP54726 363 aa13.03□□□□□ -0.32
Vps54-202ENSMUST00000109578 Pcdha12Q91Y18 950 aa13.03□□□□□ -0.32
Vps54-202ENSMUST00000109578 Mfap3Q922T2 349 aa13.03□□□□□ -0.32
Vps54-202ENSMUST00000109578 Lmbr1Q9JIT0 490 aa13.03□□□□□ -0.32
Vps54-202ENSMUST00000109578 Znfx1Q8R151 1909 aaKnown RBP13.03□□□□□ -0.32
Vps54-202ENSMUST00000109578 Scn4aQ9ER60 1841 aa13.03□□□□□ -0.32
Vps54-202ENSMUST00000109578 Pola2P33611 600 aa13.03□□□□□ -0.32
Vps54-202ENSMUST00000109578 Fam83bQ0VBM2 1012 aa13.03□□□□□ -0.32
Vps54-202ENSMUST00000109578 Ctr9Q62018 1173 aaKnown RBP13.03□□□□□ -0.32
Vps54-202ENSMUST00000109578 Cfap69Q8BH53 942 aa13.03□□□□□ -0.32
Vps54-202ENSMUST00000109578 QarsQ8BML9 775 aa13.03□□□□□ -0.32
Vps54-202ENSMUST00000109578 Uap1Q91YN5 522 aa13.03□□□□□ -0.32
Vps54-202ENSMUST00000109578 Prpf3Q922U1 683 aaKnown RBP13.03□□□□□ -0.32
Vps54-202ENSMUST00000109578 Itga2bQ9QUM0 1033 aa13.03□□□□□ -0.32
Vps54-202ENSMUST00000109578 Lgr5Q9Z1P4 907 aa13.03□□□□□ -0.32
Vps54-202ENSMUST00000109578 A0A1L1SQF0 893 aa13.02□□□□□ -0.32
Vps54-202ENSMUST00000109578 Usp53P15975 1069 aa13.02□□□□□ -0.32
Vps54-202ENSMUST00000109578 Slc7a3P70423 618 aa13.02□□□□□ -0.32
Vps54-202ENSMUST00000109578 Ppp1r21Q3TDD9 780 aa13.02□□□□□ -0.32
Vps54-202ENSMUST00000109578 MicalclQ9D5U9 680 aa13.02□□□□□ -0.32
Vps54-202ENSMUST00000109578 AfdnQ9QZQ1 1820 aaKnown RBP13.02□□□□□ -0.32
Vps54-202ENSMUST00000109578 MarcksP26645 309 aaKnown RBP13.02□□□□□ -0.32
Vps54-202ENSMUST00000109578 Cdh15P33146 784 aa13.02□□□□□ -0.32
Vps54-202ENSMUST00000109578 Pbx1P41778 430 aa13.02□□□□□ -0.32
Vps54-202ENSMUST00000109578 Rad23bP54728 416 aa13.02□□□□□ -0.32
Vps54-202ENSMUST00000109578 Zc3h12cQ5DTV4 884 aa13.02□□□□□ -0.32
Vps54-202ENSMUST00000109578 Mkrn3Q60764 544 aa13.02□□□□□ -0.32
Vps54-202ENSMUST00000109578 Ccp110Q7TSH4 1004 aa13.02□□□□□ -0.32
Vps54-202ENSMUST00000109578 Dnph1Q80VJ3 173 aa13.02□□□□□ -0.32
Vps54-202ENSMUST00000109578 Hexim1Q8R409 356 aaKnown RBP13.02□□□□□ -0.32
Vps54-202ENSMUST00000109578 Mfap3lQ9D3X9 409 aa13.02□□□□□ -0.32
Vps54-202ENSMUST00000109578 Klhl40Q9D783 621 aa13.02□□□□□ -0.32
Vps54-202ENSMUST00000109578 Cxcl11Q9JHH5 100 aa13.02□□□□□ -0.32
Vps54-202ENSMUST00000109578 Ankrd63A2ARS0 390 aa13.02□□□□□ -0.33
Vps54-202ENSMUST00000109578 Krt40Q6IFX3 439 aa13.02□□□□□ -0.33
Vps54-202ENSMUST00000109578 Nup133Q8R0G9 1155 aa13.02□□□□□ -0.33
Vps54-202ENSMUST00000109578 NesQ6P5H2 1864 aaKnown RBP13.02□□□□□ -0.33
Vps54-202ENSMUST00000109578 Gm36210A0A1B0GS00 229 aa13.02□□□□□ -0.33
Vps54-202ENSMUST00000109578 4932429P05RikA2ADI4 785 aa13.02□□□□□ -0.33
Vps54-202ENSMUST00000109578 Palm3A2TJV2 734 aa13.02□□□□□ -0.33
Vps54-202ENSMUST00000109578 Izumo3A6PWV3 263 aa13.02□□□□□ -0.33
Vps54-202ENSMUST00000109578 Prl7d1P04769 244 aa13.02□□□□□ -0.33
Vps54-202ENSMUST00000109578 Ttll12Q3UDE2 639 aa13.02□□□□□ -0.33
Vps54-202ENSMUST00000109578 Ehmt1Q5DW34 1296 aa13.02□□□□□ -0.33
Vps54-202ENSMUST00000109578 Ctdp1Q7TSG2 960 aa13.02□□□□□ -0.33
Vps54-202ENSMUST00000109578 Mtfr1lQ9CWE0 289 aa13.02□□□□□ -0.33
Vps54-202ENSMUST00000109578 Myo1hQ9D6A1 958 aa13.02□□□□□ -0.33
Vps54-202ENSMUST00000109578 CltaO08585 235 aa13.01□□□□□ -0.33
Vps54-202ENSMUST00000109578 Krt86P97861 486 aa13.01□□□□□ -0.33
Vps54-202ENSMUST00000109578 ItpripQ3TNL8 555 aa13.01□□□□□ -0.33
Vps54-202ENSMUST00000109578 Mars2Q499X9 586 aaKnown RBP13.01□□□□□ -0.33
Vps54-202ENSMUST00000109578 Lrrc15Q80X72 579 aa13.01□□□□□ -0.33
Vps54-202ENSMUST00000109578 Zmynd15Q8C0R7 736 aa13.01□□□□□ -0.33
Vps54-202ENSMUST00000109578 Gtpbp4Q99ME9 634 aaKnown RBP13.01□□□□□ -0.33
Vps54-202ENSMUST00000109578 Smc1aQ9CU62 1233 aaKnown RBP13.01□□□□□ -0.33
Vps54-202ENSMUST00000109578 CluhQ5SW19 1315 aa13.01□□□□□ -0.33
Vps54-202ENSMUST00000109578 Lrp5Q91VN0 1614 aa13.01□□□□□ -0.33
Vps54-202ENSMUST00000109578 Plekha7Q3UIL6 1118 aaKnown RBP13.01□□□□□ -0.33
Vps54-202ENSMUST00000109578 Adam6bQ6IMH7 756 aa13.01□□□□□ -0.33
Vps54-202ENSMUST00000109578 Adck2Q6NSR3 617 aa13.01□□□□□ -0.33
Vps54-202ENSMUST00000109578 Kif1bpQ6ZPU9 617 aa13.01□□□□□ -0.33
Vps54-202ENSMUST00000109578 Ano2Q8CFW1 1002 aa13.01□□□□□ -0.33
Vps54-202ENSMUST00000109578 Sh3bp5lQ99LH9 392 aa13.01□□□□□ -0.33
Vps54-202ENSMUST00000109578 Col20a1Q923P0 1320 aa13.01□□□□□ -0.33
Vps54-202ENSMUST00000109578 PappaQ8R4K8 1624 aa13.01□□□□□ -0.33
Vps54-202ENSMUST00000109578 Gm5580A0A0N4SVP8 411 aa13.01□□□□□ -0.33
Vps54-202ENSMUST00000109578 Tbc1d2B1AVH7 922 aa13.01□□□□□ -0.33
Vps54-202ENSMUST00000109578 Tuft1O08970 390 aa13.01□□□□□ -0.33
Vps54-202ENSMUST00000109578 Celf1P28659 486 aaKnown RBP13.01□□□□□ -0.33
Vps54-202ENSMUST00000109578 Ces3aQ63880 571 aa13.01□□□□□ -0.33
Vps54-202ENSMUST00000109578 Setdb2Q8C267 713 aa13.01□□□□□ -0.33
Vps54-202ENSMUST00000109578 Ces3bQ8VCU1 571 aa13.01□□□□□ -0.33
Vps54-202ENSMUST00000109578 HdlbpQ8VDJ3 1268 aaKnown RBP13.01□□□□□ -0.33
Vps54-202ENSMUST00000109578 Cfap45Q9D9U9 551 aa13.01□□□□□ -0.33
Vps54-202ENSMUST00000109578 Eif4enif1Q9EST3 983 aaKnown RBP13.01□□□□□ -0.33
Vps54-202ENSMUST00000109578 Stox1B2RQL2 990 aa13□□□□□ -0.33
Vps54-202ENSMUST00000109578 Gm5134E9QAB5 671 aa13□□□□□ -0.33
Vps54-202ENSMUST00000109578 Fez2Q6TYB5 348 aa13□□□□□ -0.33
Vps54-202ENSMUST00000109578 Snd1Q78PY7 910 aaKnown RBP13□□□□□ -0.33
Vps54-202ENSMUST00000109578 Zc3h6Q8BYK8 1177 aa13□□□□□ -0.33
Vps54-202ENSMUST00000109578 RadxQ8C779 850 aa13□□□□□ -0.33
Vps54-202ENSMUST00000109578 Myh3P13541 1940 aa13□□□□□ -0.33
Vps54-202ENSMUST00000109578 Chp1P61022 195 aa13□□□□□ -0.33
Vps54-202ENSMUST00000109578 Olfr121Q5CZY0 321 aa13□□□□□ -0.33
Vps54-202ENSMUST00000109578 Bsdc1Q80Y55 427 aa13□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 79.9 ms