RNA–Protein interactions for RNA: ENSMUST00000103633.1

Trav16n-201, Transcript of T cell receptor alpha variable 16n, mousemouse

APPRIS ALT2 BASIC

Gene Trav16n, Length 353 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16n-201ENSMUST00000103633 Nbr1P97432 988 aa4.59□□□□□ -1.67
Trav16n-201ENSMUST00000103633 Edc4Q3UJB9 1406 aaKnown RBP4.59□□□□□ -1.67
Trav16n-201ENSMUST00000103633 Rtp3Q5QGU6 474 aa4.59□□□□□ -1.67
Trav16n-201ENSMUST00000103633 Ecm1Q61508 559 aa4.59□□□□□ -1.67
Trav16n-201ENSMUST00000103633 Myo6Q64331 1265 aa4.59□□□□□ -1.67
Trav16n-201ENSMUST00000103633 Ttll5Q8CHB8 1328 aa4.59□□□□□ -1.67
Trav16n-201ENSMUST00000103633 Kremen2Q8K1S7 461 aa4.59□□□□□ -1.67
Trav16n-201ENSMUST00000103633 P3h4Q8K2B0 443 aa4.59□□□□□ -1.67
Trav16n-201ENSMUST00000103633 Pcolce2Q8R4W6 414 aa4.59□□□□□ -1.67
Trav16n-201ENSMUST00000103633 Krt25Q8VCW2 446 aa4.59□□□□□ -1.67
Trav16n-201ENSMUST00000103633 HdlbpQ8VDJ3 1268 aaKnown RBP4.59□□□□□ -1.67
Trav16n-201ENSMUST00000103633 PrameQ9D4Z5 464 aa4.59□□□□□ -1.67
Trav16n-201ENSMUST00000103633 Moap1Q9ERH6 352 aa4.59□□□□□ -1.67
Trav16n-201ENSMUST00000103633 Plxnc1Q9QZC2 1574 aa4.59□□□□□ -1.67
Trav16n-201ENSMUST00000103633 Polg2Q9QZM2 459 aa4.59□□□□□ -1.67
Trav16n-201ENSMUST00000103633 Ect2lA0A140LIP2 953 aa4.58□□□□□ -1.68
Trav16n-201ENSMUST00000103633 NpwA0A1L1STR8 176 aa4.58□□□□□ -1.68
Trav16n-201ENSMUST00000103633 A0A1Y7VJ07 166 aa4.58□□□□□ -1.68
Trav16n-201ENSMUST00000103633 AV320801A2AWL3 467 aa4.58□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Atf6F6VAN0 656 aa4.58□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Gm15023L7MUB4 467 aa4.58□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Vti1aO89116 217 aa4.58□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Hrh1P70174 488 aa4.58□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Trim75Q3UWZ0 467 aa4.58□□□□□ -1.68
Trav16n-201ENSMUST00000103633 DaglaQ6WQJ1 1044 aa4.58□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Usp1Q8BJQ2 784 aa4.58□□□□□ -1.68
Trav16n-201ENSMUST00000103633 MtbpQ8BJS8 894 aaKnown RBP4.58□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Etf1Q8BWY3 437 aaKnown RBP4.58□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Fgd2Q8BY35 655 aa4.58□□□□□ -1.68
Trav16n-201ENSMUST00000103633 DrgxQ8BYH0 263 aa4.58□□□□□ -1.68
Trav16n-201ENSMUST00000103633 ItchQ8C863 864 aa4.58□□□□□ -1.68
Trav16n-201ENSMUST00000103633 BbxQ8VBW5 907 aa4.58□□□□□ -1.68
Trav16n-201ENSMUST00000103633 HnrnpmQ9D0E1 729 aaKnown RBP4.58□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Sec13Q9D1M0 322 aa4.58□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Vstm5Q9D806 199 aa4.58□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Prpf4Q9DAW6 521 aaKnown RBP4.58□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Ampd2Q9DBT5 798 aa4.58□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Ly6iQ9WU67 134 aa4.58□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Rims1Q99NE5 1463 aa4.57□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Dapk1Q80YE7 1442 aa4.57□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Dhx9O70133 1380 aaKnown RBP4.57□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Gm7361D3Z6R1 267 aa4.57□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Dhx15O35286 795 aaKnown RBP4.57□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Pdia4P08003 638 aaKnown RBP4.57□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Hoxb2P0C1T1 354 aa4.57□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Pcsk2P21661 637 aa4.57□□□□□ -1.68
Trav16n-201ENSMUST00000103633 PgrQ00175 926 aa4.57□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Gas2l3Q3UWW6 683 aa4.57□□□□□ -1.68
Trav16n-201ENSMUST00000103633 FcrlbQ5DRQ8 427 aa4.57□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Foxd1Q61345 456 aa4.57□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Kif18bQ6PFD6 834 aa4.57□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Znf592Q8BHZ4 1262 aa4.57□□□□□ -1.68
Trav16n-201ENSMUST00000103633 OsgepQ8BWU5 335 aa4.57□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Adgra1Q8C4G9 578 aa4.57□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Gtpbp10Q8K013 366 aa4.57□□□□□ -1.68
Trav16n-201ENSMUST00000103633 NeproQ8R2U2 564 aa4.57□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Tmc2Q8R4P4 888 aa4.57□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Vmn1r42Q8VBS7 329 aa4.57□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Vmn1r43Q8VIC9 329 aa4.57□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Tmem79Q9D709 391 aa4.57□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Bola1Q9D8S9 137 aaKnown RBP4.57□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Kcnq5Q9JK45 933 aa4.57□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Kif1aP33173 1695 aa4.57□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Shank2Q80Z38 1476 aa4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 PtprgQ05909 1442 aa4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Cd109Q8R422 1442 aa4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Tnrc6bQ8BKI2 1810 aaKnown RBP4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Gm7544A0A1Y7VJ58 118 aa4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Pramel3A2AHA7 463 aa4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Gm7903A2AWL1 463 aa4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Sec14l1A8Y5H7 715 aa4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Gm7138L7N2C3 230 aa4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 MstnO08689 376 aa4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Gfra2O08842 464 aa4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Scamp3O35609 349 aa4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Ppef1O35655 650 aa4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Atxn2O70305 1285 aaKnown RBP4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Slc45a2P58355 530 aa4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Col19a1Q0VF58 1136 aa4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Ampd1Q3V1D3 745 aa4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 HecaQ3V1N5 544 aaKnown RBP4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Cep44Q5HZK1 386 aa4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Efr3bQ6ZQ18 817 aa4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Spock3Q8BKV0 436 aa4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Gpr150Q8BL07 427 aa4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Skor1Q8BX46 964 aa4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Fsd2Q8BZ52 692 aa4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Dnttip2Q8R2M2 758 aaKnown RBP4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Cyyr1Q8VIH7 165 aa4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Jam3Q9D8B7 310 aa4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Q9D9H8 365 aa4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Rtp4Q9ER80 249 aaKnown RBP4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Efcc1Q9JJF6 558 aa4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Gm3238W4VSP7 230 aa4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Atp10bB1AWN4 1474 aa4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Zswim8Q3UHH1 1832 aaKnown RBP4.56□□□□□ -1.68
Trav16n-201ENSMUST00000103633 DccP70211 1447 aa4.55□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Fam135bQ9DAI6 1403 aa4.55□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Tet3Q8BG87 1668 aa4.55□□□□□ -1.68
Trav16n-201ENSMUST00000103633 Syde2E9PUP1 1314 aa4.55□□□□□ -1.68
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms