RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 OplahQ8K010 1288 aa11.52□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 C8aQ8K182 587 aa11.52□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Angel2Q8K1C0 544 aa11.52□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Galntl5Q9D4M9 431 aa11.52□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Kcna3P16390 528 aa11.51□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 CebpaP53566 359 aa11.51□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Snap25P60879 206 aa11.51□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Tmprss11eQ5S248 423 aa11.51□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Ccdc82Q6PG04 518 aa11.51□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Ano1Q8BHY3 960 aa11.51□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Kdm4aQ8BW72 1064 aa11.51□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Kcnj14Q8JZN3 434 aa11.51□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Tfap4Q9JIZ5 338 aa11.51□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Cfap99A0A140LIX9 648 aa11.51□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Calm1P0DP26 149 aaKnown RBP11.51□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Calm2P0DP27 149 aaKnown RBP11.51□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Calm3P0DP28 149 aaKnown RBP11.51□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Armc2Q3URY6 854 aa11.51□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Ttbk2Q3UVR3 1243 aa11.51□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Zfp341Q6PGC9 846 aa11.51□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Slc9c1Q6UJY2 1175 aa11.51□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Larp6Q8BN59 492 aa11.51□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Epha10Q8BYG9 1007 aa11.51□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Gpcpd1Q8C0L9 675 aa11.51□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Bloc1s4Q8VED2 215 aa11.51□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Aldh1b1Q9CZS1 519 aa11.51□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Naaladl2A0A0N4SUJ3 795 aa11.51□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Oxr1Q4KMM3 866 aa11.51□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Tmem130Q6NXM3 419 aa11.51□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 BC048507Q80ZS7 89 aa11.51□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Epc2Q8C0I4 808 aa11.51□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 SdsQ8VBT2 327 aa11.51□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 NaspQ99MD9 773 aaKnown RBP11.51□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 NpcdF8VQB8 469 aa11.5□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Sema3fO88632 785 aa11.5□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 CtshP49935 333 aa11.5□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Zfp953Q3UPV7 304 aa11.5□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Spata21Q8BHW6 681 aa11.5□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Ranbp6Q8BIV3 1105 aa11.5□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 PdgfdQ925I7 370 aa11.5□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Tfcp2Q9ERA0 502 aa11.5□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Fam205a1D3YZF6 1314 aa11.5□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Rasa1E9PYG6 1038 aa11.5□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 LyarQ08288 388 aaKnown RBP11.5□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Dync1li2Q6PDL0 492 aaKnown RBP11.5□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Usp33Q8R5K2 909 aa11.5□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Igf2bp3Q9CPN8 579 aaKnown RBP11.5□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Gpaa1Q9WTK3 621 aa11.5□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Gm45015A0A140LII9 184 aa11.5□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Gm18336A0A140LIU8 765 aa11.5□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Irf6P97431 467 aa11.5□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Tmtc2Q56A06 836 aa11.5□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 CrebrfQ8CDG5 640 aaKnown RBP11.5□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Vmn1r199Q8R280 367 aa11.5□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Mx1P09922 631 aa11.49□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Sema3eP70275 775 aa11.49□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Pdcd6ipQ9WU78 869 aaKnown RBP11.49□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Stk39Q9Z1W9 556 aa11.49□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Dnai2A2AC93 623 aa11.49□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Foxp1P58462 705 aa11.49□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Arhgef2Q60875 985 aa11.49□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Scfd1Q8BRF7 639 aaKnown RBP11.49□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Defb15Q8R2I5 79 aa11.49□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Tsc2Q61037 1814 aa11.49□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Atp8b3Q6UQ17 1335 aa11.49□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Tbc1d8bA3KGB4 1114 aa11.49□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Rgs9O54828 675 aa11.49□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Dnajb6O54946 365 aa11.49□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Zdhhc9P59268 364 aa11.49□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Eif5P59325 429 aaKnown RBP11.49□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Cnnm3Q32NY4 713 aa11.49□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Abhd15Q5F2F2 459 aa11.49□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Kif1bpQ6ZPU9 617 aa11.49□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 VmacQ8BP01 174 aa11.49□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Gpsm2Q8VDU0 679 aa11.49□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Snapc2Q91XA5 359 aa11.49□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Akap4Q60662 849 aa11.48□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Polr2aP08775 1970 aaKnown RBP11.48□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Ppef2O35385 757 aa11.48□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 LdhaP06151 332 aaKnown RBP11.48□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Mmp14P53690 582 aa11.48□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Ms4a5Q810P8 197 aa11.48□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Arhgef6Q8K4I3 771 aa11.48□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Nop2Q922K7 793 aaKnown RBP11.48□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Cdc45Q9Z1X9 566 aa11.48□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Spryd3E9Q9B3 442 aa11.48□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Tfcp2l1Q3UNW5 479 aa11.48□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Lrrc15Q80X72 579 aa11.48□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 MthfslL7N466 203 aa11.47□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 GnaqP21279 359 aa11.47□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 MyrflQ3UN70 904 aa11.47□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Ubash3aQ3V3E1 624 aa11.47□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Smarcc2Q6PDG5 1213 aa11.47□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Cnksr2Q80YA9 1032 aa11.47□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Bcs1lQ9CZP5 418 aa11.47□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Prg3Q9JL95 222 aa11.47□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Megf6Q80V70 1572 aa11.47□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Otud5Q3U2S4 566 aa11.47□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Sfi1Q3UZY0 1216 aaKnown RBP11.47□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Ddx49Q4FZF3 480 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms