RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Utp3Q9JI13 469 aaKnown RBP8.68□□□□□ -1.02
Trim40-201ENSMUST00000087158 Jag1Q9QXX0 1218 aa8.68□□□□□ -1.02
Trim40-201ENSMUST00000087158 Magea2Q9R2A2 320 aa8.68□□□□□ -1.02
Trim40-201ENSMUST00000087158 Gm36210A0A1B0GS00 229 aa8.67□□□□□ -1.02
Trim40-201ENSMUST00000087158 Pramel3A2AHA7 463 aa8.67□□□□□ -1.02
Trim40-201ENSMUST00000087158 Gm7903A2AWL1 463 aa8.67□□□□□ -1.02
Trim40-201ENSMUST00000087158 AV320801A2AWL3 467 aa8.67□□□□□ -1.02
Trim40-201ENSMUST00000087158 Kansl3A2RSY1 903 aaKnown RBP8.67□□□□□ -1.02
Trim40-201ENSMUST00000087158 Zkscan7E9PVW1 718 aa8.67□□□□□ -1.02
Trim40-201ENSMUST00000087158 Gm15023L7MUB4 467 aa8.67□□□□□ -1.02
Trim40-201ENSMUST00000087158 Tnnt2P50752 301 aa8.67□□□□□ -1.02
Trim40-201ENSMUST00000087158 Rrp1P56183 494 aaKnown RBP8.67□□□□□ -1.02
Trim40-201ENSMUST00000087158 Ubxn2bQ0KL01 331 aa8.67□□□□□ -1.02
Trim40-201ENSMUST00000087158 Fam178bQ24JP3 464 aa8.67□□□□□ -1.02
Trim40-201ENSMUST00000087158 PrimpolQ6P1E7 537 aa8.67□□□□□ -1.02
Trim40-201ENSMUST00000087158 CtifQ6PEE2 600 aaKnown RBP8.67□□□□□ -1.02
Trim40-201ENSMUST00000087158 ErfeQ6PGN1 340 aa8.67□□□□□ -1.02
Trim40-201ENSMUST00000087158 Pip5kl1Q6U7H8 395 aa8.67□□□□□ -1.02
Trim40-201ENSMUST00000087158 Ubxn4Q8VCH8 506 aa8.67□□□□□ -1.02
Trim40-201ENSMUST00000087158 Xrcc4Q924T3 326 aa8.67□□□□□ -1.02
Trim40-201ENSMUST00000087158 Znf287Q9EQB9 759 aa8.67□□□□□ -1.02
Trim40-201ENSMUST00000087158 Tob2Q9JM55 345 aa8.67□□□□□ -1.02
Trim40-201ENSMUST00000087158 Clip2Q9Z0H8 1047 aa8.67□□□□□ -1.02
Trim40-201ENSMUST00000087158 Cspp1B2RX88 1205 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 Vmn2r68L7N2B3 851 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 Clec11aO88200 328 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 Usp53P15975 1069 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 EgfrQ01279 1210 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 VrtnQ3SYK4 740 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 Insm1Q63ZV0 521 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 Tm4sf1Q64302 202 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 DaglaQ6WQJ1 1044 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 Slc51aQ8R000 340 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 Cdk8Q8R3L8 464 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 Acot9Q9R0X4 439 aaKnown RBP8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 Mtmr2Q9Z2D1 643 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 Zmym2Q9CU65 1376 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 A0A1Y7VML8 143 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 Brpf3B2KF05 1204 aaKnown RBP8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 Ces1aE9PYP1 563 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 Il7P10168 154 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 Cdk4P30285 303 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 Nap1l2P51860 460 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 1700013D24RikQ0P521 120 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 Kmt5bQ3U8K7 883 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 IbspQ61711 324 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 Usp50Q6P8X6 390 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 Ccp110Q7TSH4 1004 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 Triml1Q8BVP1 470 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 Skor1Q8BX46 964 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 BbxQ8VBW5 907 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 Tspyl4Q8VD63 406 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 Trim11Q99PQ2 467 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 Mei1Q9D4I2 1268 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 Etnk1Q9D4V0 363 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 Mad2l2Q9D752 211 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 Tfcp2Q9ERA0 502 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 Peak1Q69Z38 1735 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 Psme4Q5SSW2 1843 aa8.66□□□□□ -1.02
Trim40-201ENSMUST00000087158 Zscan18E9PUD6 809 aa8.65□□□□□ -1.02
Trim40-201ENSMUST00000087158 Gm973E9Q295 1059 aa8.65□□□□□ -1.02
Trim40-201ENSMUST00000087158 Ifi207E9Q3L4 978 aa8.65□□□□□ -1.02
Trim40-201ENSMUST00000087158 Epb41l2O70318 988 aaKnown RBP8.65□□□□□ -1.02
Trim40-201ENSMUST00000087158 Lmnb1P14733 588 aaKnown RBP8.65□□□□□ -1.02
Trim40-201ENSMUST00000087158 GnaqP21279 359 aa8.65□□□□□ -1.02
Trim40-201ENSMUST00000087158 Ptpn12P35831 775 aa8.65□□□□□ -1.02
Trim40-201ENSMUST00000087158 Eya3P97480 510 aa8.65□□□□□ -1.02
Trim40-201ENSMUST00000087158 Fam89aQ14BJ1 175 aa8.65□□□□□ -1.02
Trim40-201ENSMUST00000087158 Tbc1d2bQ3U0J8 965 aa8.65□□□□□ -1.02
Trim40-201ENSMUST00000087158 MyrflQ3UN70 904 aa8.65□□□□□ -1.02
Trim40-201ENSMUST00000087158 GnptabQ69ZN6 1235 aa8.65□□□□□ -1.02
Trim40-201ENSMUST00000087158 Mxd3Q80US8 206 aa8.65□□□□□ -1.02
Trim40-201ENSMUST00000087158 Fbxo2Q80UW2 297 aa8.65□□□□□ -1.02
Trim40-201ENSMUST00000087158 Smc2Q8CG48 1191 aaKnown RBP8.65□□□□□ -1.02
Trim40-201ENSMUST00000087158 Nop14Q8R3N1 860 aaKnown RBP8.65□□□□□ -1.02
Trim40-201ENSMUST00000087158 Hnrnpul1Q8VDM6 859 aaKnown RBP8.65□□□□□ -1.02
Trim40-201ENSMUST00000087158 Hps3Q91VB4 1002 aa8.65□□□□□ -1.02
Trim40-201ENSMUST00000087158 Txnrd3Q99MD6 652 aa8.65□□□□□ -1.02
Trim40-201ENSMUST00000087158 Zbed3Q9D0L1 228 aa8.65□□□□□ -1.02
Trim40-201ENSMUST00000087158 Clstn1Q9EPL2 979 aa8.65□□□□□ -1.02
Trim40-201ENSMUST00000087158 Gpaa1Q9WTK3 621 aa8.65□□□□□ -1.02
Trim40-201ENSMUST00000087158 Ecm29Q6PDI5 1840 aa8.65□□□□□ -1.02
Trim40-201ENSMUST00000087158 Aox4Q3TYQ9 1336 aa8.65□□□□□ -1.02
Trim40-201ENSMUST00000087158 Pfkfb3A7UAK5 555 aa8.65□□□□□ -1.03
Trim40-201ENSMUST00000087158 Hmx1O70218 332 aa8.65□□□□□ -1.03
Trim40-201ENSMUST00000087158 Dync1i1O88485 628 aa8.65□□□□□ -1.03
Trim40-201ENSMUST00000087158 CebpaP53566 359 aa8.65□□□□□ -1.03
Trim40-201ENSMUST00000087158 Rc3h1Q4VGL6 1130 aaKnown RBP8.65□□□□□ -1.03
Trim40-201ENSMUST00000087158 Polr3gQ6NXY9 223 aa8.65□□□□□ -1.03
Trim40-201ENSMUST00000087158 Ddx31Q6NZQ2 687 aaKnown RBP8.65□□□□□ -1.03
Trim40-201ENSMUST00000087158 Pdzph1Q8BGR1 1238 aa8.65□□□□□ -1.03
Trim40-201ENSMUST00000087158 Trmt2aQ8BNV1 574 aaKnown RBP8.65□□□□□ -1.03
Trim40-201ENSMUST00000087158 Tcp11l1Q8BTG3 509 aa8.65□□□□□ -1.03
Trim40-201ENSMUST00000087158 IarsQ8BU30 1262 aa8.65□□□□□ -1.03
Trim40-201ENSMUST00000087158 RadxQ8C779 850 aa8.65□□□□□ -1.03
Trim40-201ENSMUST00000087158 Plekhg6Q8R0J1 787 aa8.65□□□□□ -1.03
Trim40-201ENSMUST00000087158 Nop2Q922K7 793 aaKnown RBP8.65□□□□□ -1.03
Trim40-201ENSMUST00000087158 Ttc5Q99LG4 440 aa8.65□□□□□ -1.03
Trim40-201ENSMUST00000087158 Tmem47Q9JJG6 181 aa8.65□□□□□ -1.03
Trim40-201ENSMUST00000087158 Itgb4A2A863 1818 aa8.64□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms