RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Thap12Q9CUX1 758 aa18.4■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Exoc3l2D3YUP5 789 aa18.4■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Dmrtc1Q9D9R7 182 aa18.4■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Akap8Q9DBR0 687 aaKnown RBP18.4■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Eef1dP57776 281 aaKnown RBP18.4■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Rab34Q64008 259 aa18.4■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Fam114a1Q9D281 569 aa18.4■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Trpm2Q91YD4 1506 aa18.39■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Bfsp1A2AMT1 669 aa18.39■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Btn2a2A4QPC6 514 aa18.39■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Lrrc59Q922Q8 307 aaKnown RBP18.39■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Sar1bQ9CQC9 198 aa18.39■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Galnt15Q9D2N8 638 aa18.39■□□□□ 0.54
Ubfd1-201ENSMUST00000033158 Eif2ak4Q9QZ05 1648 aa18.39■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Ube4aE9Q735 1028 aa18.39■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Sec63Q8VHE0 760 aaKnown RBP18.39■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Cpb1B2RS76 415 aa18.39■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 S100bP50114 92 aa18.39■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Clic6Q8BHB9 596 aa18.39■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Cst12Q9DAN8 128 aa18.39■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Iqsec3Q3TES0 1195 aa18.39■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Tas2r124Q7M718 309 aa18.39■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Ccdc14Q8K2J4 934 aa18.39■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Kcnk13Q8R1P5 405 aa18.39■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Ciao1Q99KN2 339 aa18.39■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Pdzd4Q9QY39 772 aa18.39■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Etf1Q8BWY3 437 aaKnown RBP18.38■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Med10Q9CXU0 135 aa18.38■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Stag1Q9D3E6 1258 aa18.38■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 IqcdQ9D3V1 458 aa18.38■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Gbp2Q9Z0E6 589 aa18.38■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Med23Q80YQ2 1367 aa18.38■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Ttll7A4Q9F0 912 aa18.38■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Gm5169Q5M8P2 212 aa18.38■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Fkbp3Q62446 224 aaKnown RBP18.38■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Wdr3Q8BHB4 942 aaKnown RBP18.38■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Nup58Q8R332 587 aa18.38■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Col1a2Q01149 1372 aa18.38■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 A0A1W2P6Q8 802 aa18.38■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Gm9048A0A1W2P7H4 802 aa18.38■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 A0A1W2P7Z8 802 aa18.38■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Gm9046A0A1W2P855 802 aa18.38■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Esr2O08537 530 aa18.38■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Tom1l2Q5SRX1 507 aa18.38■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 MmeQ61391 750 aa18.38■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Gpcpd1Q8C0L9 675 aa18.38■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Spats2Q8K1N4 545 aaKnown RBP18.38■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 HibadhQ99L13 335 aaKnown RBP18.38■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Trappc10Q3TLI0 1259 aa18.38■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 PpanQ91YU8 470 aaKnown RBP18.38■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Eps15P42567 897 aa18.37■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Ddx31Q6NZQ2 687 aaKnown RBP18.37■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Nxf7Q80SZ6 620 aaKnown RBP18.37■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Gtpbp4Q99ME9 634 aaKnown RBP18.37■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Clic4Q9QYB1 253 aa18.37■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Pbrm1Q8BSQ9 1634 aaKnown RBP18.37■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Gpr182P43142 395 aa18.37■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Desi2Q9D291 194 aa18.37■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Klhl40Q9D783 621 aa18.37■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Ano3A2AHL1 981 aa18.37■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Acot10Q32MW3 439 aa18.37■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Gas7Q60780 421 aa18.37■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Olfr118Q7TRJ6 321 aa18.37■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Lrrc8aQ80WG5 810 aa18.37■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Scyl2Q8CFE4 930 aa18.37■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Cct6aP80317 531 aaKnown RBP18.37■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Atp1b3P97370 278 aa18.37■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Hgh1Q8C3I8 393 aa18.37■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Zfp113Q8C689 439 aa18.37■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Pcdhb9E9Q5G2 828 aa18.36■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Sox13Q04891 613 aa18.36■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Slc18a1Q8R090 521 aa18.36■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Dok7Q18PE0 504 aa18.36■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 CtcfQ61164 736 aaKnown RBP18.36■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Pcdha12Q91Y18 950 aa18.36■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 SncbQ91ZZ3 133 aa18.36■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Diaph2O70566 1098 aa18.36■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 FerP70451 823 aa18.36■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Ccdc186Q8C9S4 917 aa18.36■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Atad3Q925I1 591 aa18.36■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Adamts12Q811B3 1600 aa18.36■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Lipo1J3QME6 396 aa18.35■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Ppp2r2cQ8BG02 447 aa18.35■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Mroh7A2AVR2 1279 aa18.35■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Ftl1P29391 183 aa18.35■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Mnat1P51949 309 aa18.35■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 1700013D24RikQ0P521 120 aa18.35■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Krt9Q6RHW0 743 aa18.35■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Slc44a1Q6X893 653 aa18.35■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Gm43638A0A0J9YU36 694 aa18.35■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Fdx1P46656 188 aa18.35■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Agbl1Q09M05 972 aa18.35■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Anks6Q6GQX6 883 aa18.35■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Iws1Q8C1D8 766 aa18.35■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Ccdc38Q8CDN8 563 aa18.35■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Pcdha7Q91Y13 937 aa18.35■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Adarb2Q9JI20 745 aa18.35■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Lrrc74aA0A1Y7VMD6 494 aa18.35■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 Ca8P28651 291 aa18.35■□□□□ 0.53
Ubfd1-201ENSMUST00000033158 GabpaQ00422 454 aa18.35■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms