RNA–Protein interactions for RNA: ENSMUST00000005749.5

Ctr9-201, Transcript of RNA polymerase-associated protein CTR9 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctr9, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9-201ENSMUST00000005749 Nlrp5Q9R1M5 1163 aa13.53□□□□□ -0.24
Ctr9-201ENSMUST00000005749 A0A1W2P6Q8 802 aa13.53□□□□□ -0.24
Ctr9-201ENSMUST00000005749 Gm9048A0A1W2P7H4 802 aa13.53□□□□□ -0.24
Ctr9-201ENSMUST00000005749 A0A1W2P7Z8 802 aa13.53□□□□□ -0.24
Ctr9-201ENSMUST00000005749 Gm9046A0A1W2P855 802 aa13.53□□□□□ -0.24
Ctr9-201ENSMUST00000005749 Pdia4P08003 638 aaKnown RBP13.53□□□□□ -0.24
Ctr9-201ENSMUST00000005749 Foxp1P58462 705 aa13.53□□□□□ -0.24
Ctr9-201ENSMUST00000005749 Slc10a4Q3UEZ8 437 aa13.53□□□□□ -0.24
Ctr9-201ENSMUST00000005749 Stxbp3Q60770 592 aa13.53□□□□□ -0.24
Ctr9-201ENSMUST00000005749 Gas7Q60780 421 aa13.53□□□□□ -0.24
Ctr9-201ENSMUST00000005749 BC048507Q80ZS7 89 aa13.53□□□□□ -0.24
Ctr9-201ENSMUST00000005749 Vps18Q8R307 973 aa13.53□□□□□ -0.24
Ctr9-201ENSMUST00000005749 Ttc8Q8VD72 515 aa13.53□□□□□ -0.24
Ctr9-201ENSMUST00000005749 Cabp7Q91ZM8 215 aa13.53□□□□□ -0.24
Ctr9-201ENSMUST00000005749 Myo5cE9Q1F5 1742 aa13.52□□□□□ -0.24
Ctr9-201ENSMUST00000005749 1700006A11RikB9EHI3 544 aa13.52□□□□□ -0.24
Ctr9-201ENSMUST00000005749 Psmc2P46471 433 aa13.52□□□□□ -0.24
Ctr9-201ENSMUST00000005749 Uri1Q3TLD5 531 aa13.52□□□□□ -0.24
Ctr9-201ENSMUST00000005749 Ppp2r5bQ6PD28 497 aa13.52□□□□□ -0.24
Ctr9-201ENSMUST00000005749 Zbtb39Q6PDK0 712 aa13.52□□□□□ -0.24
Ctr9-201ENSMUST00000005749 Slc44a1Q6X893 653 aa13.52□□□□□ -0.24
Ctr9-201ENSMUST00000005749 NkapQ9D0F4 415 aaKnown RBP13.52□□□□□ -0.24
Ctr9-201ENSMUST00000005749 Pcif1P59114 706 aa13.52□□□□□ -0.25
Ctr9-201ENSMUST00000005749 PcQ05920 1178 aa13.52□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Saal1Q9D2C2 474 aa13.52□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Pfkfb1P70266 471 aa13.52□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Psd3Q2PFD7 1037 aa13.52□□□□□ -0.25
Ctr9-201ENSMUST00000005749 WaplQ65Z40 1200 aaKnown RBP13.52□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Tmem132dQ76HP3 1097 aa13.52□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Fermt2Q8CIB5 680 aa13.52□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Ccdc12Q8R344 166 aaKnown RBP13.52□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Ttll1Q91V51 423 aa13.52□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Kif17Q99PW8 1038 aa13.52□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Prdm2A2A7B5 1709 aaKnown RBP13.52□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Ankrd63A2ARS0 390 aa13.51□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Magea6O89010 325 aa13.51□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Ccdc189Q6NZQ0 333 aa13.51□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Abcf1Q6P542 837 aaKnown RBP13.51□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Magea3Q6T340 320 aa13.51□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Glis3Q6XP49 780 aa13.51□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Rexo1Q7TT28 1213 aa13.51□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Parp14Q2EMV9 1817 aa13.51□□□□□ -0.25
Ctr9-201ENSMUST00000005749 GmnnO88513 206 aa13.51□□□□□ -0.25
Ctr9-201ENSMUST00000005749 NyxP83503 476 aa13.51□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Ccdc93Q7TQK5 629 aa13.51□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Hirip3Q8BLH7 601 aa13.51□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Dnaaf2Q8BPI1 814 aa13.51□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Ces1Q8VCC2 565 aa13.51□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Gm1993A6X8I0 212 aa13.51□□□□□ -0.25
Ctr9-201ENSMUST00000005749 SlxD3Z347 212 aa13.51□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Nop53Q8BK35 484 aaKnown RBP13.51□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Terb1Q8C0V1 768 aa13.51□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Amigo3Q8C2S7 508 aa13.51□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Cetn1P41209 172 aa13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Capza3P70190 299 aa13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Fam198bQ3UPI1 517 aa13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Zkscan4Q5SZT6 480 aa13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Prm3Q62100 101 aa13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Hoxa13Q62424 386 aa13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Hook2Q7TMK6 716 aa13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Pde5aQ8CG03 865 aa13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 GlyctkQ8QZY2 523 aa13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 BaatQ91X34 420 aa13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Lzts2Q91YU6 671 aa13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Snw1Q9CSN1 536 aaKnown RBP13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Cnpy3Q9DAU1 276 aa13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Prkab1Q9R078 270 aa13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 GakQ99KY4 1305 aa13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Elf1Q60775 612 aa13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Topbp1Q6ZQF0 1515 aa13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 D1Pas1P16381 660 aa13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Sept2P42208 361 aaKnown RBP13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Sfi1Q3UZY0 1216 aaKnown RBP13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Vat1lQ80TB8 417 aa13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Adgra1Q8C4G9 578 aa13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Wdr24Q8CFJ9 790 aa13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Otud6bQ8K2H2 294 aa13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 CerkQ8K4Q7 531 aa13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Rfc4Q99J62 364 aa13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Myl7Q9QVP4 175 aa13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Pex3Q9QXY9 372 aa13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 GdaQ9R111 454 aa13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Stim2P83093 746 aa13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Mier3Q3UHF3 551 aa13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Tubgcp2Q921G8 905 aa13.5□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Map3k15A2AQW0 1331 aa13.49□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Znf521Q6KAS7 1311 aa13.49□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Krt40Q6IFX3 439 aa13.49□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Zfp341Q6PGC9 846 aa13.49□□□□□ -0.25
Ctr9-201ENSMUST00000005749 CpzQ8R4V4 654 aa13.49□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Ifih1Q8R5F7 1025 aa13.49□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Ppil4Q9CXG3 492 aaKnown RBP13.49□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Hmgb1P63158 215 aaKnown RBP13.49□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Zrsr2Q62377 462 aaKnown RBP13.49□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Brd2Q7JJ13 798 aaKnown RBP13.49□□□□□ -0.25
Ctr9-201ENSMUST00000005749 MaddQ80U28 1577 aa13.49□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Elmsan1E9Q2I4 1089 aaKnown RBP13.49□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Ankrd35E9Q9D8 996 aa13.49□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Gm5624F6ZZG8 207 aa13.49□□□□□ -0.25
Ctr9-201ENSMUST00000005749 Lrrc32G3XA59 663 aa13.49□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 13.9 ms