RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Ccdc186Q8C9S4 917 aa14.29□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Dctpp1Q9QY93 170 aa14.29□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Flt4P35917 1363 aa14.29□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Gm5580A0A0N4SVP8 411 aa14.29□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Map2k1P31938 393 aa14.29□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Slc27a1Q60714 646 aa14.29□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Cyp24a1Q64441 514 aa14.29□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Hexim1Q8R409 356 aaKnown RBP14.29□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Six6os1Q9CTN5 574 aa14.29□□□□□ -0.12
Clcn3-201ENSMUST00000004430 ErmardE9Q048 622 aa14.28□□□□□ -0.12
Clcn3-201ENSMUST00000004430 CltaO08585 235 aa14.28□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Tex35Q14BK3 207 aa14.28□□□□□ -0.12
Clcn3-201ENSMUST00000004430 HhatQ8BMT9 499 aa14.28□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Olfm5Q8BU90 496 aa14.28□□□□□ -0.12
Clcn3-201ENSMUST00000004430 A0A1Y7VML8 143 aa14.28□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Klhl34A2AI76 644 aa14.28□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Ap1g2O88512 791 aa14.28□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Gpr182P43142 395 aa14.28□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Smtnl1Q99LM3 459 aa14.28□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Mst1rQ62190 1378 aa14.28□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Gm30191A0A0U1RNT7 187 aa14.28□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Epb41l2O70318 988 aaKnown RBP14.28□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Sox5P35710 763 aa14.28□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Lig3P97386 1015 aa14.28□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Znf697Q569E7 569 aa14.28□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Morc2aQ69ZX6 1030 aa14.28□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Jade3Q6IE82 823 aa14.28□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Ebag9Q9D0V7 213 aa14.28□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Rnf40Q3U319 1001 aa14.27□□□□□ -0.12
Clcn3-201ENSMUST00000004430 LpxnQ99N69 386 aa14.27□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Irs4Q9Z0Y7 1216 aa14.27□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Orc1Q9Z1N2 840 aaKnown RBP14.27□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Rimbp3Q3V0F0 1606 aa14.27□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Eftud2O08810 971 aaKnown RBP14.27□□□□□ -0.12
Clcn3-201ENSMUST00000004430 MybP06876 636 aa14.27□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Pla2g4bP0C871 782 aa14.27□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Mdh1P14152 334 aa14.27□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Iqsec3Q3TES0 1195 aa14.27□□□□□ -0.12
Clcn3-201ENSMUST00000004430 LbrQ3U9G9 626 aaKnown RBP14.27□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Haus7Q8BKT8 364 aa14.27□□□□□ -0.12
Clcn3-201ENSMUST00000004430 Rnf123Q5XPI3 1314 aa14.27□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Zbtb7aO88939 569 aaKnown RBP14.27□□□□□ -0.13
Clcn3-201ENSMUST00000004430 1700013D24RikQ0P521 120 aa14.27□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Igf2bp2Q5SF07 592 aaKnown RBP14.27□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Dpf2Q61103 391 aaKnown RBP14.27□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Pcdhb14Q6PB90 796 aa14.27□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Rassf2Q8BMS9 326 aa14.27□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Eaf2Q91ZD6 262 aa14.27□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Myo5bP21271 1818 aa14.27□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Pde6aP27664 859 aa14.26□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Cdr2P97817 455 aa14.26□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Zfp781Q0P5U5 243 aa14.26□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Tshz1Q5DTH5 1084 aa14.26□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Ripor2Q80U16 1078 aa14.26□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Miga2Q8BK03 593 aa14.26□□□□□ -0.13
Clcn3-201ENSMUST00000004430 IcoslgQ9JHJ8 322 aa14.26□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Gpbp1Q6NXH3 473 aaKnown RBP14.26□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Tada3Q8R0L9 432 aa14.26□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Eif2ak3Q9Z2B5 1114 aa14.26□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Qtrt2B8ZXI1 415 aa14.26□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Hpcal4Q8BGZ1 191 aa14.26□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Rgs9O54828 675 aa14.26□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Igfbp6P47880 238 aa14.26□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Tcerg1lQ3B807 590 aa14.26□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Zc3h12cQ5DTV4 884 aa14.26□□□□□ -0.13
Clcn3-201ENSMUST00000004430 RragaQ80X95 313 aa14.26□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Iffo1Q8BXL9 562 aa14.26□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Ctnnbl1Q9CWL8 563 aaKnown RBP14.26□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Npc1l1Q6T3U4 1333 aa14.26□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Tubb5P99024 444 aaKnown RBP14.25□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Ccdc174Q3U155 467 aa14.25□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Drc1Q3USS3 753 aa14.25□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Gm12185Q5NCB2 835 aa14.25□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Vps37dQ810I0 261 aa14.25□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Emilin2Q8K482 1074 aa14.25□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Akap8Q9DBR0 687 aaKnown RBP14.25□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Topaz1E5FYH1 1653 aa14.25□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Pdia6Q922R8 440 aaKnown RBP14.25□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Card14Q99KF0 999 aa14.25□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Wdr64Q9D565 1086 aa14.25□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Ccne2Q9Z238 404 aa14.25□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Eef2P58252 858 aaKnown RBP14.25□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Trim6Q8BGE7 488 aa14.25□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Rab11fip4Q8BQP8 635 aa14.25□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Mis18aQ9CZJ6 204 aa14.25□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Cnbd1B1AWM0 430 aa14.24□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Sec24cG3X972 1096 aaKnown RBP14.24□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Gucy2cQ3UWA6 1072 aa14.24□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Eme2Q56A04 373 aa14.24□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Usp49Q6P9L4 685 aa14.24□□□□□ -0.13
Clcn3-201ENSMUST00000004430 RgmbQ7TQ33 436 aa14.24□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Atp1a1Q8VDN2 1023 aaKnown RBP14.24□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Mfap3Q922T2 349 aa14.24□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Vps33aQ9D2N9 598 aa14.24□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Copb1Q9JIF7 953 aa14.24□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Ess2O70279 479 aa14.24□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Hic2Q9JLZ6 619 aaKnown RBP14.24□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Stk39Q9Z1W9 556 aa14.24□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Zfp213E9QAW0 468 aa14.24□□□□□ -0.13
Clcn3-201ENSMUST00000004430 Akap2O54931 893 aa14.24□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms