RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Cfap45Q9D9U9 551 aa21.27■■□□□ 1
Shkbp1-201ENSMUST00000003857 SelenooQ9DBC0 667 aa21.27■■□□□ 1
Shkbp1-201ENSMUST00000003857 Arfgef1G3X9K3 1846 aaKnown RBP21.27■■□□□ 1
Shkbp1-201ENSMUST00000003857 Ehmt1Q5DW34 1296 aa21.26■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Rasal3Q8C2K5 1041 aa21.26■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Rassf4Q8CB96 322 aa21.26■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 E2f4Q8R0K9 410 aa21.26■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 CpvlQ9D3S9 478 aa21.26■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Mfap3lQ9D3X9 409 aa21.26■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Cyp26c1B2RXA7 518 aa21.26■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Gjb4Q02738 266 aa21.26■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Traf3ip1Q149C2 625 aa21.26■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Tshz1Q5DTH5 1084 aa21.26■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Hdac4Q6NZM9 1076 aa21.26■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Ccdc12Q8R344 166 aaKnown RBP21.26■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Znf609Q8BZ47 1413 aa21.25■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Prss40A6H6T1 365 aa21.25■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Traf1P39428 409 aa21.25■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 RadxQ8C779 850 aa21.25■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 IntuQ059U7 942 aa21.25■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Myo1hQ9D6A1 958 aa21.25■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Brwd3A2AHJ4 1799 aa21.24■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Gucy2cQ3UWA6 1072 aa21.24■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 MycbpapQ5SUV2 932 aa21.24■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Fchsd1Q6PFY1 688 aa21.24■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Rbm33Q9CXK9 1231 aaKnown RBP21.24■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Foxo3Q9WVH4 672 aa21.24■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Ulk4Q3V129 1303 aa21.24■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 MarcksP26645 309 aaKnown RBP21.24■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Olfr121Q5CZY0 321 aa21.24■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Triml1Q8BVP1 470 aa21.24■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Sgpp1Q9JI99 430 aa21.24■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Scgb2b18A0A087WPA9 112 aa21.23■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Nmt2O70311 529 aa21.23■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Rad23aP54726 363 aa21.23■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Ppp1r21Q3TDD9 780 aa21.23■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Tmtc2Q56A06 836 aa21.23■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Cfap69Q8BH53 942 aa21.23■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Ercc6lQ8BHK9 1240 aa21.23■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 LarsQ8BMJ2 1178 aa21.23■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Txndc5Q91W90 417 aa21.23■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Scrn1Q9CZC8 414 aa21.23■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Lgr5Q9Z1P4 907 aa21.23■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Calcoco2A2A6M5 331 aa21.23■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Gm21969J3QJZ1 289 aa21.23■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Mapkapk5O54992 473 aa21.23■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Tmco3Q8BH01 678 aa21.23■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Phf20l1Q8CCJ9 1013 aa21.23■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Mical1Q8VDP3 1048 aa21.23■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 MicalclQ9D5U9 680 aa21.23■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Tube1Q9D6T1 475 aa21.23■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Api5O35841 504 aaKnown RBP21.22■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Npy5rO70342 466 aa21.22■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Myl3P09542 204 aa21.22■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Emc10Q3TAS6 258 aa21.22■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Adam6bQ6IMH7 756 aa21.22■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Apol10aQ8CCA5 318 aa21.22■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Pcdhgc5Q91XW9 944 aa21.22■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Sf3b3Q921M3 1217 aaKnown RBP21.22■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Hip1rQ9JKY5 1068 aa21.22■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Atp1a4Q9WV27 1032 aa21.22■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Fer1l6E0CZ42 1862 aa21.22■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Pnpla6Q3TRM4 1355 aa21.22■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 1700013D24RikQ0P521 120 aa21.22■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Trappc10Q3TLI0 1259 aa21.22■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Mrps31Q61733 384 aaKnown RBP21.22■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Stn1Q8K2X3 378 aa21.22■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Trim29Q8R2Q0 587 aa21.22■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Uchl5Q9WUP7 329 aa21.22■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Stox1B2RQL2 990 aa21.21■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Mars2Q499X9 586 aaKnown RBP21.21■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 RbsnQ80Y56 783 aa21.21■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Tcp11l2Q8K1H7 517 aa21.21■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Klc3Q91W40 508 aa21.21■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 AatfQ9JKX4 526 aaKnown RBP21.21■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Peak1Q69Z38 1735 aa21.21■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Pet2A2AHY8 747 aa21.21■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 GpiP06745 558 aaKnown RBP21.21■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Cdh15P33146 784 aa21.21■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 RragbQ6NTA4 374 aa21.21■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Smarca1Q6PGB8 1046 aa21.21■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Nop9Q8BMC4 636 aaKnown RBP21.21■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Pcdha12Q91Y18 950 aa21.21■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Pla2g12bQ99P27 195 aa21.21■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 Chaf1aQ9QWF0 911 aa21.21■□□□□ 0.99
Shkbp1-201ENSMUST00000003857 A0A0U1RNP2 1173 aa21.2■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Pfkfb3A7UAK5 555 aa21.2■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 CltaO08585 235 aa21.2■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Anp32eP97822 260 aaKnown RBP21.2■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Ppfibp1Q8C8U0 969 aaKnown RBP21.2■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Fam161bQ8CB59 589 aa21.2■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Fam114a1Q9D281 569 aa21.2■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Abhd2Q9QXM0 425 aa21.2■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Gpaa1Q9WTK3 621 aa21.2■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Gja10Q9WUS4 505 aa21.2■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Gucy1a2F8VQK3 730 aa21.19■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Ddb1Q3U1J4 1140 aaKnown RBP21.19■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 CtcfQ61164 736 aaKnown RBP21.19■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Q66JV7 365 aa21.19■□□□□ 0.98
Shkbp1-201ENSMUST00000003857 Dusp9Q7TNL7 452 aa21.19■□□□□ 0.98
Retrieved 100 of 22,080 RNA–protein pairs in 79.9 ms