RNA–Protein interactions for RNA: ENSMUST00000217270.1

Ccdc84-211, Transcript of Coiled-coil domain-containing protein 84, mousemouse

TSL 1 (best) BASIC

Gene Ccdc84, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc84-211ENSMUST00000217270 Muc19Q6PZE0 7524 aa6.52□□□□□ -1.36
Ccdc84-211ENSMUST00000217270 Gm45337A0A1B0GS71 263 aa6.5□□□□□ -1.37
Ccdc84-211ENSMUST00000217270 Brk1Q91VR8 75 aa6.5□□□□□ -1.37
Ccdc84-211ENSMUST00000217270 Krtap7-1Q9D3I6 87 aa6.5□□□□□ -1.37
Ccdc84-211ENSMUST00000217270 Lce1fB9EJP6 147 aa6.47□□□□□ -1.37
Ccdc84-211ENSMUST00000217270 Lce1cQ9D1C5 147 aa6.47□□□□□ -1.37
Ccdc84-211ENSMUST00000217270 Gm3880A0A1B0GSB3 72 aa6.46□□□□□ -1.38
Ccdc84-211ENSMUST00000217270 Gm10153A0A1B0GRL1 320 aa6.31□□□□□ -1.4
Ccdc84-211ENSMUST00000217270 H2al1mQ9DAD9 105 aa6.27□□□□□ -1.41
Ccdc84-211ENSMUST00000217270 Gm40460A0A1B0GR10 244 aa6.26□□□□□ -1.41
Ccdc84-211ENSMUST00000217270 Gm7579A0A1B0GRJ4 243 aa6.26□□□□□ -1.41
Ccdc84-211ENSMUST00000217270 H2al1kJ3QP08 105 aa6.26□□□□□ -1.41
Ccdc84-211ENSMUST00000217270 SmcpP15265 143 aa6.26□□□□□ -1.41
Ccdc84-211ENSMUST00000217270 Krtap5-5Q2TA51 241 aa6.26□□□□□ -1.41
Ccdc84-211ENSMUST00000217270 Krtap5-4Q62220 223 aa6.26□□□□□ -1.41
Ccdc84-211ENSMUST00000217270 Hmcn1D3YXG0 5634 aa6.25□□□□□ -1.41
Ccdc84-211ENSMUST00000217270 Krtap19-4Q925H7 84 aa6.23□□□□□ -1.41
Ccdc84-211ENSMUST00000217270 Gm11938Q9D3H4 131 aa6.23□□□□□ -1.41
Ccdc84-211ENSMUST00000217270 Rps28P62858 69 aaKnown RBP6.21□□□□□ -1.42
Ccdc84-211ENSMUST00000217270 Gm39115A0A1B0GSH7 232 aa6.2□□□□□ -1.42
Ccdc84-211ENSMUST00000217270 Mt1P02802 61 aaKnown RBP6.2□□□□□ -1.42
Ccdc84-211ENSMUST00000217270 DstQ91ZU6 7393 aaKnown RBP6.13□□□□□ -1.43
Ccdc84-211ENSMUST00000217270 Gm12216A0A1W2P827 62 aa6.08□□□□□ -1.44
Ccdc84-211ENSMUST00000217270 Krtap4-16Q91W93 202 aa6.02□□□□□ -1.45
Ccdc84-211ENSMUST00000217270 NebE9Q1W3 7152 aa6.02□□□□□ -1.45
Ccdc84-211ENSMUST00000217270 Romo1P60603 79 aa5.93□□□□□ -1.46
Ccdc84-211ENSMUST00000217270 Lce3cQ91V05 98 aa5.92□□□□□ -1.46
Ccdc84-211ENSMUST00000217270 Ndufs5Q99LY9 106 aa5.88□□□□□ -1.47
Ccdc84-211ENSMUST00000217270 Gm45618A0A1B0GSA0 219 aa5.83□□□□□ -1.48
Ccdc84-211ENSMUST00000217270 Lce3dE9Q8V1 98 aa5.82□□□□□ -1.48
Ccdc84-211ENSMUST00000217270 Tnp1P10856 55 aa5.81□□□□□ -1.48
Ccdc84-211ENSMUST00000217270 Sprr2fO70557 76 aa5.78□□□□□ -1.48
Ccdc84-211ENSMUST00000217270 Sox16Q62247 57 aa5.77□□□□□ -1.49
Ccdc84-211ENSMUST00000217270 4933415A04RikQ9D443 101 aa5.76□□□□□ -1.49
Ccdc84-211ENSMUST00000217270 Mt3P28184 68 aa5.73□□□□□ -1.49
Ccdc84-211ENSMUST00000217270 ObscnA2AAJ9 8891 aaKnown RBP5.71□□□□□ -1.49
Ccdc84-211ENSMUST00000217270 AhnakE9Q616 5656 aaKnown RBP5.65□□□□□ -1.51
Ccdc84-211ENSMUST00000217270 Lce3eF8VQJ0 98 aa5.62□□□□□ -1.51
Ccdc84-211ENSMUST00000217270 Lce3fQ6PAI4 98 aa5.62□□□□□ -1.51
Ccdc84-211ENSMUST00000217270 Gm3646F6S692 53 aa5.51□□□□□ -1.53
Ccdc84-211ENSMUST00000217270 A0A1Y7VLE6 161 aa5.47□□□□□ -1.53
Ccdc84-211ENSMUST00000217270 Gm40193A0A1B0GT39 78 aa5.44□□□□□ -1.54
Ccdc84-211ENSMUST00000217270 Gm10100J3QK64 120 aa5.43□□□□□ -1.54
Ccdc84-211ENSMUST00000217270 4933428G20RikQ9D3X4 101 aa5.4□□□□□ -1.54
Ccdc84-211ENSMUST00000217270 Lce3aQ497I5 98 aa5.36□□□□□ -1.55
Ccdc84-211ENSMUST00000217270 Gm10337F7DEP7 55 aa5.21□□□□□ -1.58
Ccdc84-211ENSMUST00000217270 Sprr2dO70555 85 aa5.17□□□□□ -1.58
Ccdc84-211ENSMUST00000217270 Pcp4P63054 62 aa5.16□□□□□ -1.58
Ccdc84-211ENSMUST00000217270 Sprr2eO70556 76 aa5.04□□□□□ -1.6
Ccdc84-211ENSMUST00000217270 Gm10024A0A0A0MQA4 119 aa4.88□□□□□ -1.63
Ccdc84-211ENSMUST00000217270 A0A1Y7VJ07 166 aa4.69□□□□□ -1.66
Ccdc84-211ENSMUST00000217270 Muc16A0A140LJ72 8478 aa4.64□□□□□ -1.67
Ccdc84-211ENSMUST00000217270 Sprr2hO70559 108 aa4.63□□□□□ -1.67
Ccdc84-211ENSMUST00000217270 Gm29735A0A1B0GT06 219 aa4.59□□□□□ -1.67
Ccdc84-211ENSMUST00000217270 Gm10142J3KMP7 120 aa4.58□□□□□ -1.68
Ccdc84-211ENSMUST00000217270 Mp68P56379 58 aa4.53□□□□□ -1.68
Ccdc84-211ENSMUST00000217270 SvipQ3UZP4 77 aa4.46□□□□□ -1.7
Ccdc84-211ENSMUST00000217270 Gm20538F6Z9R1 75 aa4.45□□□□□ -1.7
Ccdc84-211ENSMUST00000217270 1110025L11RikO09048 78 aa4.39□□□□□ -1.71
Ccdc84-211ENSMUST00000217270 Krtap6-5Q925H3 78 aa4.39□□□□□ -1.71
Ccdc84-211ENSMUST00000217270 Gm11567Q9D141 195 aa4.31□□□□□ -1.72
Ccdc84-211ENSMUST00000217270 Gm10229O08631 77 aa3.95□□□□□ -1.78
Ccdc84-211ENSMUST00000217270 A030003K21RikA0A1Y7VIM3 128 aa3.88□□□□□ -1.79
Ccdc84-211ENSMUST00000217270 Krtap28-10A0A1Y7VP58 119 aa3.7□□□□□ -1.82
Ccdc84-211ENSMUST00000217270 Krtap5-1Q64507 230 aa3.7□□□□□ -1.82
Ccdc84-211ENSMUST00000217270 Sprr2bO70554 98 aa3.6□□□□□ -1.83
Ccdc84-211ENSMUST00000217270 Krtap31-2Q8CAY5 177 aa3.57□□□□□ -1.84
Ccdc84-211ENSMUST00000217270 Krtap31-1Q9D644 177 aa3.57□□□□□ -1.84
Ccdc84-211ENSMUST00000217270 Krtap6-2O08884 159 aa3.55□□□□□ -1.84
Ccdc84-211ENSMUST00000217270 Krtap21-1Q925H4 128 aa3.54□□□□□ -1.84
Ccdc84-211ENSMUST00000217270 Ndufaf8A2AMZ4 74 aa3.24□□□□□ -1.89
Ccdc84-211ENSMUST00000217270 A0A286YCP9 139 aa3.14□□□□□ -1.91
Ccdc84-211ENSMUST00000217270 Gm6217A0A1Y7VJK9 128 aa2.92□□□□□ -1.94
Ccdc84-211ENSMUST00000217270 Phgr1Q8K0G7 91 aa2.84□□□□□ -1.95
Ccdc84-211ENSMUST00000217270 Krtap28-13A0A087WQP5 138 aa2.8□□□□□ -1.96
Ccdc84-211ENSMUST00000217270 A030005K14RikA0A1Y7VNY1 122 aa2.75□□□□□ -1.97
Ccdc84-211ENSMUST00000217270 Gm4559A4IF42 199 aa2.67□□□□□ -1.98
Ccdc84-211ENSMUST00000217270 Gm9112A2AI92 75 aa2.53□□□□□ -2
Ccdc84-211ENSMUST00000217270 Gm7544A0A1Y7VJ58 118 aa2.48□□□□□ -2.01
Ccdc84-211ENSMUST00000217270 A030014E15RikA0A1Y7VJV2 120 aa2.48□□□□□ -2.01
Retrieved 80 of 22,080 RNA–protein pairs in 71.8 ms