RNA–Protein interactions for RNA: ENSMUST00000207178.1

Lmo1-202, Transcript of Rhombotin-1, mousemouse

APPRIS ALT1 TSL 2 BASIC

Gene Lmo1, Length 912 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo1-202ENSMUST00000207178 Krtap5-4Q62220 223 aa6.73□□□□□ -1.33
Lmo1-202ENSMUST00000207178 Gm10153A0A1B0GRL1 320 aa6.7□□□□□ -1.34
Lmo1-202ENSMUST00000207178 Krtap4-16Q91W93 202 aa6.68□□□□□ -1.34
Lmo1-202ENSMUST00000207178 SnurfQ9WU12 71 aa6.68□□□□□ -1.34
Lmo1-202ENSMUST00000207178 Smlr1J3QMJ4 66 aa6.66□□□□□ -1.34
Lmo1-202ENSMUST00000207178 Krtap19-4Q925H7 84 aa6.64□□□□□ -1.35
Lmo1-202ENSMUST00000207178 H2al1bA0A087WP11 105 aa6.61□□□□□ -1.35
Lmo1-202ENSMUST00000207178 Gm10272F7CZ33 110 aa6.61□□□□□ -1.35
Lmo1-202ENSMUST00000207178 Cdc42se1Q8BHL7 80 aa6.61□□□□□ -1.35
Lmo1-202ENSMUST00000207178 Gm10197F6QEY5 67 aa6.55□□□□□ -1.36
Lmo1-202ENSMUST00000207178 Pet100P0DJE0 76 aa6.54□□□□□ -1.36
Lmo1-202ENSMUST00000207178 Phxr4P15974 95 aa6.53□□□□□ -1.36
Lmo1-202ENSMUST00000207178 Gm45618A0A1B0GSA0 219 aa6.48□□□□□ -1.37
Lmo1-202ENSMUST00000207178 Krtap7-1Q9D3I6 87 aa6.48□□□□□ -1.37
Lmo1-202ENSMUST00000207178 Ndufb1P0DN34 57 aa6.43□□□□□ -1.38
Lmo1-202ENSMUST00000207178 Gm11938Q9D3H4 131 aa6.41□□□□□ -1.38
Lmo1-202ENSMUST00000207178 Mt1P02802 61 aaKnown RBP6.4□□□□□ -1.38
Lmo1-202ENSMUST00000207178 AhnakE9Q616 5656 aaKnown RBP6.36□□□□□ -1.39
Lmo1-202ENSMUST00000207178 Sprr2fO70557 76 aa6.35□□□□□ -1.39
Lmo1-202ENSMUST00000207178 Tmem258P61166 79 aa6.35□□□□□ -1.39
Lmo1-202ENSMUST00000207178 Gm19935A0A1B0GSF9 52 aa6.3□□□□□ -1.4
Lmo1-202ENSMUST00000207178 Gm3880A0A1B0GSB3 72 aa6.2□□□□□ -1.42
Lmo1-202ENSMUST00000207178 Brk1Q91VR8 75 aa6.1□□□□□ -1.43
Lmo1-202ENSMUST00000207178 SmcpP15265 143 aa6.02□□□□□ -1.45
Lmo1-202ENSMUST00000207178 Mt3P28184 68 aa5.98□□□□□ -1.45
Lmo1-202ENSMUST00000207178 Lce3cQ91V05 98 aa5.97□□□□□ -1.45
Lmo1-202ENSMUST00000207178 H2al1mQ9DAD9 105 aa5.96□□□□□ -1.46
Lmo1-202ENSMUST00000207178 Rps28P62858 69 aaKnown RBP5.94□□□□□ -1.46
Lmo1-202ENSMUST00000207178 H2al1kJ3QP08 105 aa5.91□□□□□ -1.46
Lmo1-202ENSMUST00000207178 Lce3dE9Q8V1 98 aa5.86□□□□□ -1.47
Lmo1-202ENSMUST00000207178 Gm12216A0A1W2P827 62 aa5.82□□□□□ -1.48
Lmo1-202ENSMUST00000207178 4933415A04RikQ9D443 101 aa5.75□□□□□ -1.49
Lmo1-202ENSMUST00000207178 ObscnA2AAJ9 8891 aaKnown RBP5.72□□□□□ -1.49
Lmo1-202ENSMUST00000207178 A0A1Y7VLE6 161 aa5.68□□□□□ -1.5
Lmo1-202ENSMUST00000207178 Tnp1P10856 55 aa5.64□□□□□ -1.51
Lmo1-202ENSMUST00000207178 Romo1P60603 79 aa5.64□□□□□ -1.51
Lmo1-202ENSMUST00000207178 Pcp4P63054 62 aa5.64□□□□□ -1.51
Lmo1-202ENSMUST00000207178 Lce3eF8VQJ0 98 aa5.62□□□□□ -1.51
Lmo1-202ENSMUST00000207178 Lce3fQ6PAI4 98 aa5.62□□□□□ -1.51
Lmo1-202ENSMUST00000207178 Gm10100J3QK64 120 aa5.61□□□□□ -1.51
Lmo1-202ENSMUST00000207178 Ndufs5Q99LY9 106 aa5.54□□□□□ -1.52
Lmo1-202ENSMUST00000207178 Sox16Q62247 57 aa5.47□□□□□ -1.53
Lmo1-202ENSMUST00000207178 4933428G20RikQ9D3X4 101 aa5.4□□□□□ -1.54
Lmo1-202ENSMUST00000207178 Lce3aQ497I5 98 aa5.37□□□□□ -1.55
Lmo1-202ENSMUST00000207178 Gm3646F6S692 53 aa5.28□□□□□ -1.56
Lmo1-202ENSMUST00000207178 Sprr2eO70556 76 aa5.24□□□□□ -1.57
Lmo1-202ENSMUST00000207178 Gm10337F7DEP7 55 aa5.23□□□□□ -1.57
Lmo1-202ENSMUST00000207178 Gm40193A0A1B0GT39 78 aa5.18□□□□□ -1.58
Lmo1-202ENSMUST00000207178 Sprr2hO70559 108 aa5.09□□□□□ -1.59
Lmo1-202ENSMUST00000207178 SvipQ3UZP4 77 aa5.06□□□□□ -1.6
Lmo1-202ENSMUST00000207178 Muc16A0A140LJ72 8478 aa5.04□□□□□ -1.6
Lmo1-202ENSMUST00000207178 Sprr2dO70555 85 aa5.04□□□□□ -1.6
Lmo1-202ENSMUST00000207178 Gm10024A0A0A0MQA4 119 aa5□□□□□ -1.61
Lmo1-202ENSMUST00000207178 A0A1Y7VJ07 166 aa4.96□□□□□ -1.62
Lmo1-202ENSMUST00000207178 Gm29735A0A1B0GT06 219 aa4.89□□□□□ -1.63
Lmo1-202ENSMUST00000207178 Gm10142J3KMP7 120 aa4.61□□□□□ -1.67
Lmo1-202ENSMUST00000207178 Gm11567Q9D141 195 aa4.59□□□□□ -1.67
Lmo1-202ENSMUST00000207178 1110025L11RikO09048 78 aa4.42□□□□□ -1.7
Lmo1-202ENSMUST00000207178 Krtap6-5Q925H3 78 aa4.42□□□□□ -1.7
Lmo1-202ENSMUST00000207178 A030003K21RikA0A1Y7VIM3 128 aa4.36□□□□□ -1.71
Lmo1-202ENSMUST00000207178 Mp68P56379 58 aa4.31□□□□□ -1.72
Lmo1-202ENSMUST00000207178 Gm20538F6Z9R1 75 aa4.22□□□□□ -1.73
Lmo1-202ENSMUST00000207178 Krtap28-10A0A1Y7VP58 119 aa4.21□□□□□ -1.74
Lmo1-202ENSMUST00000207178 Krtap5-1Q64507 230 aa4.12□□□□□ -1.75
Lmo1-202ENSMUST00000207178 Gm10229O08631 77 aa4□□□□□ -1.77
Lmo1-202ENSMUST00000207178 Sprr2bO70554 98 aa3.94□□□□□ -1.78
Lmo1-202ENSMUST00000207178 Krtap31-2Q8CAY5 177 aa3.87□□□□□ -1.79
Lmo1-202ENSMUST00000207178 Krtap31-1Q9D644 177 aa3.87□□□□□ -1.79
Lmo1-202ENSMUST00000207178 Krtap6-2O08884 159 aa3.68□□□□□ -1.82
Lmo1-202ENSMUST00000207178 Krtap21-1Q925H4 128 aa3.54□□□□□ -1.84
Lmo1-202ENSMUST00000207178 Ndufaf8A2AMZ4 74 aa3.51□□□□□ -1.85
Lmo1-202ENSMUST00000207178 A0A286YCP9 139 aa3.37□□□□□ -1.87
Lmo1-202ENSMUST00000207178 Gm6217A0A1Y7VJK9 128 aa3.3□□□□□ -1.88
Lmo1-202ENSMUST00000207178 Gm9112A2AI92 75 aa2.99□□□□□ -1.93
Lmo1-202ENSMUST00000207178 Phgr1Q8K0G7 91 aa2.88□□□□□ -1.95
Lmo1-202ENSMUST00000207178 Gm4559A4IF42 199 aa2.86□□□□□ -1.95
Lmo1-202ENSMUST00000207178 A030005K14RikA0A1Y7VNY1 122 aa2.22□□□□□ -2.05
Lmo1-202ENSMUST00000207178 Krtap28-13A0A087WQP5 138 aa1.92□□□□□ -2.1
Lmo1-202ENSMUST00000207178 A030014E15RikA0A1Y7VJV2 120 aa1.77□□□□□ -2.13
Lmo1-202ENSMUST00000207178 Gm7544A0A1Y7VJ58 118 aa1.7□□□□□ -2.14
Retrieved 80 of 22,080 RNA–protein pairs in 5.8 ms