RNA–Protein interactions for RNA: ENSMUST00000162439.7

Shox2-204, Transcript of Short stature homeobox protein 2, mousemouse

TSL 1 (best) BASIC

Gene Shox2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2-204ENSMUST00000162439 Lce1fB9EJP6 147 aa7.52□□□□□ -1.21
Shox2-204ENSMUST00000162439 Lce1cQ9D1C5 147 aa7.52□□□□□ -1.21
Shox2-204ENSMUST00000162439 Tmem258P61166 79 aa7.48□□□□□ -1.21
Shox2-204ENSMUST00000162439 Krtap7-1Q9D3I6 87 aa7.48□□□□□ -1.21
Shox2-204ENSMUST00000162439 Hmcn1D3YXG0 5634 aa7.39□□□□□ -1.23
Shox2-204ENSMUST00000162439 Gm19935A0A1B0GSF9 52 aa7.35□□□□□ -1.23
Shox2-204ENSMUST00000162439 Gm3880A0A1B0GSB3 72 aa7.34□□□□□ -1.23
Shox2-204ENSMUST00000162439 Gm10153A0A1B0GRL1 320 aa7.32□□□□□ -1.24
Shox2-204ENSMUST00000162439 Brk1Q91VR8 75 aa7.29□□□□□ -1.24
Shox2-204ENSMUST00000162439 Gm40460A0A1B0GR10 244 aa7.26□□□□□ -1.25
Shox2-204ENSMUST00000162439 Gm7579A0A1B0GRJ4 243 aa7.26□□□□□ -1.25
Shox2-204ENSMUST00000162439 Krtap5-5Q2TA51 241 aa7.26□□□□□ -1.25
Shox2-204ENSMUST00000162439 Krtap5-4Q62220 223 aa7.26□□□□□ -1.25
Shox2-204ENSMUST00000162439 Krtap19-4Q925H7 84 aa7.24□□□□□ -1.25
Shox2-204ENSMUST00000162439 Gm39115A0A1B0GSH7 232 aa7.22□□□□□ -1.25
Shox2-204ENSMUST00000162439 DstQ91ZU6 7393 aaKnown RBP7.2□□□□□ -1.26
Shox2-204ENSMUST00000162439 Gm11938Q9D3H4 131 aa7.19□□□□□ -1.26
Shox2-204ENSMUST00000162439 Mt1P02802 61 aaKnown RBP7.16□□□□□ -1.26
Shox2-204ENSMUST00000162439 NebE9Q1W3 7152 aa7.05□□□□□ -1.28
Shox2-204ENSMUST00000162439 H2al1mQ9DAD9 105 aa7.05□□□□□ -1.28
Shox2-204ENSMUST00000162439 H2al1kJ3QP08 105 aa7.03□□□□□ -1.28
Shox2-204ENSMUST00000162439 Krtap4-16Q91W93 202 aa6.92□□□□□ -1.3
Shox2-204ENSMUST00000162439 Gm12216A0A1W2P827 62 aa6.87□□□□□ -1.31
Shox2-204ENSMUST00000162439 Lce3cQ91V05 98 aa6.84□□□□□ -1.31
Shox2-204ENSMUST00000162439 Gm45618A0A1B0GSA0 219 aa6.79□□□□□ -1.32
Shox2-204ENSMUST00000162439 SmcpP15265 143 aa6.76□□□□□ -1.33
Shox2-204ENSMUST00000162439 Lce3dE9Q8V1 98 aa6.72□□□□□ -1.33
Shox2-204ENSMUST00000162439 Sprr2fO70557 76 aa6.7□□□□□ -1.34
Shox2-204ENSMUST00000162439 Romo1P60603 79 aa6.69□□□□□ -1.34
Shox2-204ENSMUST00000162439 AhnakE9Q616 5656 aaKnown RBP6.68□□□□□ -1.34
Shox2-204ENSMUST00000162439 4933415A04RikQ9D443 101 aa6.66□□□□□ -1.34
Shox2-204ENSMUST00000162439 ObscnA2AAJ9 8891 aaKnown RBP6.65□□□□□ -1.34
Shox2-204ENSMUST00000162439 Mt3P28184 68 aa6.65□□□□□ -1.34
Shox2-204ENSMUST00000162439 Ndufs5Q99LY9 106 aa6.64□□□□□ -1.35
Shox2-204ENSMUST00000162439 Pcp4P63054 62 aa6.62□□□□□ -1.35
Shox2-204ENSMUST00000162439 Rps28P62858 69 aaKnown RBP6.61□□□□□ -1.35
Shox2-204ENSMUST00000162439 Tnp1P10856 55 aa6.59□□□□□ -1.35
Shox2-204ENSMUST00000162439 Lce3eF8VQJ0 98 aa6.47□□□□□ -1.37
Shox2-204ENSMUST00000162439 Lce3fQ6PAI4 98 aa6.47□□□□□ -1.37
Shox2-204ENSMUST00000162439 Krtap28-13A0A087WQP5 138 aa6.41□□□□□ -1.38
Shox2-204ENSMUST00000162439 A0A1Y7VLE6 161 aa6.41□□□□□ -1.38
Shox2-204ENSMUST00000162439 A030005K14RikA0A1Y7VNY1 122 aa6.36□□□□□ -1.39
Shox2-204ENSMUST00000162439 Krtap28-10A0A1Y7VP58 119 aa6.29□□□□□ -1.4
Shox2-204ENSMUST00000162439 SvipQ3UZP4 77 aa6.29□□□□□ -1.4
Shox2-204ENSMUST00000162439 Gm10100J3QK64 120 aa6.28□□□□□ -1.4
Shox2-204ENSMUST00000162439 4933428G20RikQ9D3X4 101 aa6.19□□□□□ -1.42
Shox2-204ENSMUST00000162439 Lce3aQ497I5 98 aa6.18□□□□□ -1.42
Shox2-204ENSMUST00000162439 Gm3646F6S692 53 aa6.13□□□□□ -1.43
Shox2-204ENSMUST00000162439 Gm40193A0A1B0GT39 78 aa6.11□□□□□ -1.43
Shox2-204ENSMUST00000162439 Sox16Q62247 57 aa6.11□□□□□ -1.43
Shox2-204ENSMUST00000162439 A0A1Y7VJ07 166 aa5.88□□□□□ -1.47
Shox2-204ENSMUST00000162439 Sprr2dO70555 85 aa5.88□□□□□ -1.47
Shox2-204ENSMUST00000162439 A030014E15RikA0A1Y7VJV2 120 aa5.86□□□□□ -1.47
Shox2-204ENSMUST00000162439 Gm10337F7DEP7 55 aa5.86□□□□□ -1.47
Shox2-204ENSMUST00000162439 Sprr2eO70556 76 aa5.84□□□□□ -1.47
Shox2-204ENSMUST00000162439 Krtap31-2Q8CAY5 177 aa5.74□□□□□ -1.49
Shox2-204ENSMUST00000162439 Gm7544A0A1Y7VJ58 118 aa5.7□□□□□ -1.5
Shox2-204ENSMUST00000162439 Gm10024A0A0A0MQA4 119 aa5.63□□□□□ -1.51
Shox2-204ENSMUST00000162439 Muc16A0A140LJ72 8478 aa5.47□□□□□ -1.53
Shox2-204ENSMUST00000162439 Sprr2hO70559 108 aa5.39□□□□□ -1.55
Shox2-204ENSMUST00000162439 Gm29735A0A1B0GT06 219 aa5.31□□□□□ -1.56
Shox2-204ENSMUST00000162439 Gm10142J3KMP7 120 aa5.27□□□□□ -1.57
Shox2-204ENSMUST00000162439 Krtap31-1Q9D644 177 aa5.18□□□□□ -1.58
Shox2-204ENSMUST00000162439 1110025L11RikO09048 78 aa5.06□□□□□ -1.6
Shox2-204ENSMUST00000162439 Krtap6-5Q925H3 78 aa5.06□□□□□ -1.6
Shox2-204ENSMUST00000162439 Mp68P56379 58 aa5.02□□□□□ -1.61
Shox2-204ENSMUST00000162439 Gm11567Q9D141 195 aa5.02□□□□□ -1.61
Shox2-204ENSMUST00000162439 Gm20538F6Z9R1 75 aa4.97□□□□□ -1.61
Shox2-204ENSMUST00000162439 A0A286YCP9 139 aa4.75□□□□□ -1.65
Shox2-204ENSMUST00000162439 A030003K21RikA0A1Y7VIM3 128 aa4.58□□□□□ -1.68
Shox2-204ENSMUST00000162439 Gm10229O08631 77 aa4.55□□□□□ -1.68
Shox2-204ENSMUST00000162439 Gm6217A0A1Y7VJK9 128 aa4.41□□□□□ -1.7
Shox2-204ENSMUST00000162439 Krtap5-1Q64507 230 aa4.24□□□□□ -1.73
Shox2-204ENSMUST00000162439 Sprr2bO70554 98 aa4.2□□□□□ -1.74
Shox2-204ENSMUST00000162439 Krtap6-2O08884 159 aa4.12□□□□□ -1.75
Shox2-204ENSMUST00000162439 Krtap21-1Q925H4 128 aa4.07□□□□□ -1.76
Shox2-204ENSMUST00000162439 Ndufaf8A2AMZ4 74 aa4.06□□□□□ -1.76
Shox2-204ENSMUST00000162439 Gm9112A2AI92 75 aa3.63□□□□□ -1.83
Shox2-204ENSMUST00000162439 Phgr1Q8K0G7 91 aa3.28□□□□□ -1.88
Shox2-204ENSMUST00000162439 Gm4559A4IF42 199 aa3.11□□□□□ -1.91
Retrieved 80 of 22,080 RNA–protein pairs in 12.4 ms