RNA–Protein interactions for RNA: ENSMUST00000162439.7

Shox2-204, Transcript of Short stature homeobox protein 2, mousemouse

TSL 1 (best) BASIC

Gene Shox2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2-204ENSMUST00000162439 Lce1fB9EJP6 147 aa7,52□□□□□ -1,21
Shox2-204ENSMUST00000162439 Lce1cQ9D1C5 147 aa7,52□□□□□ -1,21
Shox2-204ENSMUST00000162439 Tmem258P61166 79 aa7,48□□□□□ -1,21
Shox2-204ENSMUST00000162439 Krtap7-1Q9D3I6 87 aa7,48□□□□□ -1,21
Shox2-204ENSMUST00000162439 Hmcn1D3YXG0 5634 aa7,39□□□□□ -1,23
Shox2-204ENSMUST00000162439 Gm19935A0A1B0GSF9 52 aa7,35□□□□□ -1,23
Shox2-204ENSMUST00000162439 Gm3880A0A1B0GSB3 72 aa7,34□□□□□ -1,23
Shox2-204ENSMUST00000162439 Gm10153A0A1B0GRL1 320 aa7,32□□□□□ -1,24
Shox2-204ENSMUST00000162439 Brk1Q91VR8 75 aa7,29□□□□□ -1,24
Shox2-204ENSMUST00000162439 Gm40460A0A1B0GR10 244 aa7,26□□□□□ -1,25
Shox2-204ENSMUST00000162439 Gm7579A0A1B0GRJ4 243 aa7,26□□□□□ -1,25
Shox2-204ENSMUST00000162439 Krtap5-5Q2TA51 241 aa7,26□□□□□ -1,25
Shox2-204ENSMUST00000162439 Krtap5-4Q62220 223 aa7,26□□□□□ -1,25
Shox2-204ENSMUST00000162439 Krtap19-4Q925H7 84 aa7,24□□□□□ -1,25
Shox2-204ENSMUST00000162439 Gm39115A0A1B0GSH7 232 aa7,22□□□□□ -1,25
Shox2-204ENSMUST00000162439 DstQ91ZU6 7393 aaKnown RBP7,2□□□□□ -1,26
Shox2-204ENSMUST00000162439 Gm11938Q9D3H4 131 aa7,19□□□□□ -1,26
Shox2-204ENSMUST00000162439 Mt1P02802 61 aaKnown RBP7,16□□□□□ -1,26
Shox2-204ENSMUST00000162439 NebE9Q1W3 7152 aa7,05□□□□□ -1,28
Shox2-204ENSMUST00000162439 H2al1mQ9DAD9 105 aa7,05□□□□□ -1,28
Shox2-204ENSMUST00000162439 H2al1kJ3QP08 105 aa7,03□□□□□ -1,28
Shox2-204ENSMUST00000162439 Krtap4-16Q91W93 202 aa6,92□□□□□ -1,3
Shox2-204ENSMUST00000162439 Gm12216A0A1W2P827 62 aa6,87□□□□□ -1,31
Shox2-204ENSMUST00000162439 Lce3cQ91V05 98 aa6,84□□□□□ -1,31
Shox2-204ENSMUST00000162439 Gm45618A0A1B0GSA0 219 aa6,79□□□□□ -1,32
Shox2-204ENSMUST00000162439 SmcpP15265 143 aa6,76□□□□□ -1,33
Shox2-204ENSMUST00000162439 Lce3dE9Q8V1 98 aa6,72□□□□□ -1,33
Shox2-204ENSMUST00000162439 Sprr2fO70557 76 aa6,7□□□□□ -1,34
Shox2-204ENSMUST00000162439 Romo1P60603 79 aa6,69□□□□□ -1,34
Shox2-204ENSMUST00000162439 AhnakE9Q616 5656 aaKnown RBP6,68□□□□□ -1,34
Shox2-204ENSMUST00000162439 4933415A04RikQ9D443 101 aa6,66□□□□□ -1,34
Shox2-204ENSMUST00000162439 ObscnA2AAJ9 8891 aaKnown RBP6,65□□□□□ -1,34
Shox2-204ENSMUST00000162439 Mt3P28184 68 aa6,65□□□□□ -1,34
Shox2-204ENSMUST00000162439 Ndufs5Q99LY9 106 aa6,64□□□□□ -1,35
Shox2-204ENSMUST00000162439 Pcp4P63054 62 aa6,62□□□□□ -1,35
Shox2-204ENSMUST00000162439 Rps28P62858 69 aaKnown RBP6,61□□□□□ -1,35
Shox2-204ENSMUST00000162439 Tnp1P10856 55 aa6,59□□□□□ -1,35
Shox2-204ENSMUST00000162439 Lce3eF8VQJ0 98 aa6,47□□□□□ -1,37
Shox2-204ENSMUST00000162439 Lce3fQ6PAI4 98 aa6,47□□□□□ -1,37
Shox2-204ENSMUST00000162439 Krtap28-13A0A087WQP5 138 aa6,41□□□□□ -1,38
Shox2-204ENSMUST00000162439 A0A1Y7VLE6 161 aa6,41□□□□□ -1,38
Shox2-204ENSMUST00000162439 A030005K14RikA0A1Y7VNY1 122 aa6,36□□□□□ -1,39
Shox2-204ENSMUST00000162439 Krtap28-10A0A1Y7VP58 119 aa6,29□□□□□ -1,4
Shox2-204ENSMUST00000162439 SvipQ3UZP4 77 aa6,29□□□□□ -1,4
Shox2-204ENSMUST00000162439 Gm10100J3QK64 120 aa6,28□□□□□ -1,4
Shox2-204ENSMUST00000162439 4933428G20RikQ9D3X4 101 aa6,19□□□□□ -1,42
Shox2-204ENSMUST00000162439 Lce3aQ497I5 98 aa6,18□□□□□ -1,42
Shox2-204ENSMUST00000162439 Gm3646F6S692 53 aa6,13□□□□□ -1,43
Shox2-204ENSMUST00000162439 Gm40193A0A1B0GT39 78 aa6,11□□□□□ -1,43
Shox2-204ENSMUST00000162439 Sox16Q62247 57 aa6,11□□□□□ -1,43
Shox2-204ENSMUST00000162439 A0A1Y7VJ07 166 aa5,88□□□□□ -1,47
Shox2-204ENSMUST00000162439 Sprr2dO70555 85 aa5,88□□□□□ -1,47
Shox2-204ENSMUST00000162439 A030014E15RikA0A1Y7VJV2 120 aa5,86□□□□□ -1,47
Shox2-204ENSMUST00000162439 Gm10337F7DEP7 55 aa5,86□□□□□ -1,47
Shox2-204ENSMUST00000162439 Sprr2eO70556 76 aa5,84□□□□□ -1,47
Shox2-204ENSMUST00000162439 Krtap31-2Q8CAY5 177 aa5,74□□□□□ -1,49
Shox2-204ENSMUST00000162439 Gm7544A0A1Y7VJ58 118 aa5,7□□□□□ -1,5
Shox2-204ENSMUST00000162439 Gm10024A0A0A0MQA4 119 aa5,63□□□□□ -1,51
Shox2-204ENSMUST00000162439 Muc16A0A140LJ72 8478 aa5,47□□□□□ -1,53
Shox2-204ENSMUST00000162439 Sprr2hO70559 108 aa5,39□□□□□ -1,55
Shox2-204ENSMUST00000162439 Gm29735A0A1B0GT06 219 aa5,31□□□□□ -1,56
Shox2-204ENSMUST00000162439 Gm10142J3KMP7 120 aa5,27□□□□□ -1,57
Shox2-204ENSMUST00000162439 Krtap31-1Q9D644 177 aa5,18□□□□□ -1,58
Shox2-204ENSMUST00000162439 1110025L11RikO09048 78 aa5,06□□□□□ -1,6
Shox2-204ENSMUST00000162439 Krtap6-5Q925H3 78 aa5,06□□□□□ -1,6
Shox2-204ENSMUST00000162439 Mp68P56379 58 aa5,02□□□□□ -1,61
Shox2-204ENSMUST00000162439 Gm11567Q9D141 195 aa5,02□□□□□ -1,61
Shox2-204ENSMUST00000162439 Gm20538F6Z9R1 75 aa4,97□□□□□ -1,61
Shox2-204ENSMUST00000162439 A0A286YCP9 139 aa4,75□□□□□ -1,65
Shox2-204ENSMUST00000162439 A030003K21RikA0A1Y7VIM3 128 aa4,58□□□□□ -1,68
Shox2-204ENSMUST00000162439 Gm10229O08631 77 aa4,55□□□□□ -1,68
Shox2-204ENSMUST00000162439 Gm6217A0A1Y7VJK9 128 aa4,41□□□□□ -1,7
Shox2-204ENSMUST00000162439 Krtap5-1Q64507 230 aa4,24□□□□□ -1,73
Shox2-204ENSMUST00000162439 Sprr2bO70554 98 aa4,2□□□□□ -1,74
Shox2-204ENSMUST00000162439 Krtap6-2O08884 159 aa4,12□□□□□ -1,75
Shox2-204ENSMUST00000162439 Krtap21-1Q925H4 128 aa4,07□□□□□ -1,76
Shox2-204ENSMUST00000162439 Ndufaf8A2AMZ4 74 aa4,06□□□□□ -1,76
Shox2-204ENSMUST00000162439 Gm9112A2AI92 75 aa3,63□□□□□ -1,83
Shox2-204ENSMUST00000162439 Phgr1Q8K0G7 91 aa3,28□□□□□ -1,88
Shox2-204ENSMUST00000162439 Gm4559A4IF42 199 aa3,11□□□□□ -1,91
Retrieved 80 of 22,080 RNA–protein pairs in 8,3 ms