RNA–Protein interactions for RNA: ENSMUST00000124246.3

Gt(ROSA)26Sor-201, mousemouse

TSL 1 (best) BASIC

Gene Gt(ROSA)26Sor, Length 1,181 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gt(ROSA)26Sor-201ENSMUST00000124246 A0A286YCP9 139 aa7,45□□□□□ -1,22
Gt(ROSA)26Sor-201ENSMUST00000124246 Muc19Q6PZE0 7524 aa7,45□□□□□ -1,22
Gt(ROSA)26Sor-201ENSMUST00000124246 SnurfQ9WU12 71 aa7,44□□□□□ -1,22
Gt(ROSA)26Sor-201ENSMUST00000124246 Cdc42se1Q8BHL7 80 aa7,39□□□□□ -1,23
Gt(ROSA)26Sor-201ENSMUST00000124246 Gm45337A0A1B0GS71 263 aa7,38□□□□□ -1,23
Gt(ROSA)26Sor-201ENSMUST00000124246 Gpr98Q8VHN7 6298 aaKnown RBP7,37□□□□□ -1,23
Gt(ROSA)26Sor-201ENSMUST00000124246 H2al1bA0A087WP11 105 aa7,37□□□□□ -1,23
Gt(ROSA)26Sor-201ENSMUST00000124246 Pet100P0DJE0 76 aa7,35□□□□□ -1,23
Gt(ROSA)26Sor-201ENSMUST00000124246 Gm10272F7CZ33 110 aa7,32□□□□□ -1,24
Gt(ROSA)26Sor-201ENSMUST00000124246 Lce1fB9EJP6 147 aa7,31□□□□□ -1,24
Gt(ROSA)26Sor-201ENSMUST00000124246 Lce1cQ9D1C5 147 aa7,31□□□□□ -1,24
Gt(ROSA)26Sor-201ENSMUST00000124246 Gm10197F6QEY5 67 aa7,29□□□□□ -1,24
Gt(ROSA)26Sor-201ENSMUST00000124246 Phxr4P15974 95 aa7,28□□□□□ -1,24
Gt(ROSA)26Sor-201ENSMUST00000124246 Ndufb1P0DN34 57 aa7,19□□□□□ -1,26
Gt(ROSA)26Sor-201ENSMUST00000124246 Krtap7-1Q9D3I6 87 aa7,18□□□□□ -1,26
Gt(ROSA)26Sor-201ENSMUST00000124246 Hmcn1D3YXG0 5634 aa7,12□□□□□ -1,27
Gt(ROSA)26Sor-201ENSMUST00000124246 Gm10153A0A1B0GRL1 320 aa7,11□□□□□ -1,27
Gt(ROSA)26Sor-201ENSMUST00000124246 Gm40460A0A1B0GR10 244 aa7,09□□□□□ -1,27
Gt(ROSA)26Sor-201ENSMUST00000124246 Gm7579A0A1B0GRJ4 243 aa7,09□□□□□ -1,27
Gt(ROSA)26Sor-201ENSMUST00000124246 Tmem258P61166 79 aa7,09□□□□□ -1,27
Gt(ROSA)26Sor-201ENSMUST00000124246 Krtap5-5Q2TA51 241 aa7,09□□□□□ -1,27
Gt(ROSA)26Sor-201ENSMUST00000124246 Krtap5-4Q62220 223 aa7,09□□□□□ -1,27
Gt(ROSA)26Sor-201ENSMUST00000124246 Krtap19-4Q925H7 84 aa7,09□□□□□ -1,27
Gt(ROSA)26Sor-201ENSMUST00000124246 Gm39115A0A1B0GSH7 232 aa7,08□□□□□ -1,28
Gt(ROSA)26Sor-201ENSMUST00000124246 Gm11938Q9D3H4 131 aa6,98□□□□□ -1,29
Gt(ROSA)26Sor-201ENSMUST00000124246 Gm19935A0A1B0GSF9 52 aa6,97□□□□□ -1,29
Gt(ROSA)26Sor-201ENSMUST00000124246 Mt1P02802 61 aaKnown RBP6,94□□□□□ -1,3
Gt(ROSA)26Sor-201ENSMUST00000124246 DstQ91ZU6 7393 aaKnown RBP6,93□□□□□ -1,3
Gt(ROSA)26Sor-201ENSMUST00000124246 Gm3880A0A1B0GSB3 72 aa6,87□□□□□ -1,31
Gt(ROSA)26Sor-201ENSMUST00000124246 Brk1Q91VR8 75 aa6,85□□□□□ -1,31
Gt(ROSA)26Sor-201ENSMUST00000124246 Krtap4-16Q91W93 202 aa6,83□□□□□ -1,32
Gt(ROSA)26Sor-201ENSMUST00000124246 NebE9Q1W3 7152 aa6,81□□□□□ -1,32
Gt(ROSA)26Sor-201ENSMUST00000124246 Gm45618A0A1B0GSA0 219 aa6,69□□□□□ -1,34
Gt(ROSA)26Sor-201ENSMUST00000124246 H2al1mQ9DAD9 105 aa6,66□□□□□ -1,34
Gt(ROSA)26Sor-201ENSMUST00000124246 Sprr2fO70557 76 aa6,63□□□□□ -1,35
Gt(ROSA)26Sor-201ENSMUST00000124246 SmcpP15265 143 aa6,62□□□□□ -1,35
Gt(ROSA)26Sor-201ENSMUST00000124246 Lce3cQ91V05 98 aa6,62□□□□□ -1,35
Gt(ROSA)26Sor-201ENSMUST00000124246 H2al1kJ3QP08 105 aa6,6□□□□□ -1,35
Gt(ROSA)26Sor-201ENSMUST00000124246 Gm12216A0A1W2P827 62 aa6,5□□□□□ -1,37
Gt(ROSA)26Sor-201ENSMUST00000124246 Lce3dE9Q8V1 98 aa6,5□□□□□ -1,37
Gt(ROSA)26Sor-201ENSMUST00000124246 Gm10100J3QK64 120 aa6,49□□□□□ -1,37
Gt(ROSA)26Sor-201ENSMUST00000124246 Mt3P28184 68 aa6,48□□□□□ -1,37
Gt(ROSA)26Sor-201ENSMUST00000124246 AhnakE9Q616 5656 aaKnown RBP6,43□□□□□ -1,38
Gt(ROSA)26Sor-201ENSMUST00000124246 4933415A04RikQ9D443 101 aa6,36□□□□□ -1,39
Gt(ROSA)26Sor-201ENSMUST00000124246 Rps28P62858 69 aaKnown RBP6,32□□□□□ -1,4
Gt(ROSA)26Sor-201ENSMUST00000124246 Tnp1P10856 55 aa6,31□□□□□ -1,4
Gt(ROSA)26Sor-201ENSMUST00000124246 Romo1P60603 79 aa6,28□□□□□ -1,4
Gt(ROSA)26Sor-201ENSMUST00000124246 Lce3eF8VQJ0 98 aa6,24□□□□□ -1,41
Gt(ROSA)26Sor-201ENSMUST00000124246 Lce3fQ6PAI4 98 aa6,24□□□□□ -1,41
Gt(ROSA)26Sor-201ENSMUST00000124246 ObscnA2AAJ9 8891 aaKnown RBP6,22□□□□□ -1,41
Gt(ROSA)26Sor-201ENSMUST00000124246 Ndufs5Q99LY9 106 aa6,21□□□□□ -1,42
Gt(ROSA)26Sor-201ENSMUST00000124246 Gm11567Q9D141 195 aa6,15□□□□□ -1,42
Gt(ROSA)26Sor-201ENSMUST00000124246 4933428G20RikQ9D3X4 101 aa6,04□□□□□ -1,44
Gt(ROSA)26Sor-201ENSMUST00000124246 Gm29735A0A1B0GT06 219 aa6□□□□□ -1,45
Gt(ROSA)26Sor-201ENSMUST00000124246 Lce3aQ497I5 98 aa5,96□□□□□ -1,46
Gt(ROSA)26Sor-201ENSMUST00000124246 Sox16Q62247 57 aa5,89□□□□□ -1,47
Gt(ROSA)26Sor-201ENSMUST00000124246 Gm40193A0A1B0GT39 78 aa5,8□□□□□ -1,48
Gt(ROSA)26Sor-201ENSMUST00000124246 Gm3646F6S692 53 aa5,8□□□□□ -1,48
Gt(ROSA)26Sor-201ENSMUST00000124246 Sprr2eO70556 76 aa5,7□□□□□ -1,5
Gt(ROSA)26Sor-201ENSMUST00000124246 Sprr2dO70555 85 aa5,59□□□□□ -1,51
Gt(ROSA)26Sor-201ENSMUST00000124246 Gm10142J3KMP7 120 aa5,56□□□□□ -1,52
Gt(ROSA)26Sor-201ENSMUST00000124246 Gm10024A0A0A0MQA4 119 aa5,48□□□□□ -1,53
Gt(ROSA)26Sor-201ENSMUST00000124246 Sprr2hO70559 108 aa5,33□□□□□ -1,56
Gt(ROSA)26Sor-201ENSMUST00000124246 Muc16A0A140LJ72 8478 aa5,21□□□□□ -1,58
Gt(ROSA)26Sor-201ENSMUST00000124246 Gm10337F7DEP7 55 aa5,03□□□□□ -1,6
Gt(ROSA)26Sor-201ENSMUST00000124246 1110025L11RikO09048 78 aa4,89□□□□□ -1,63
Gt(ROSA)26Sor-201ENSMUST00000124246 Krtap6-5Q925H3 78 aa4,89□□□□□ -1,63
Gt(ROSA)26Sor-201ENSMUST00000124246 Gm20538F6Z9R1 75 aa4,79□□□□□ -1,64
Gt(ROSA)26Sor-201ENSMUST00000124246 Mp68P56379 58 aa4,79□□□□□ -1,64
Gt(ROSA)26Sor-201ENSMUST00000124246 Pcp4P63054 62 aa4,62□□□□□ -1,67
Gt(ROSA)26Sor-201ENSMUST00000124246 Gm10229O08631 77 aa4,41□□□□□ -1,7
Gt(ROSA)26Sor-201ENSMUST00000124246 Krtap5-1Q64507 230 aa4,17□□□□□ -1,74
Gt(ROSA)26Sor-201ENSMUST00000124246 Sprr2bO70554 98 aa4,14□□□□□ -1,75
Gt(ROSA)26Sor-201ENSMUST00000124246 Gm4559A4IF42 199 aa4□□□□□ -1,77
Gt(ROSA)26Sor-201ENSMUST00000124246 Krtap6-2O08884 159 aa4□□□□□ -1,77
Gt(ROSA)26Sor-201ENSMUST00000124246 Krtap21-1Q925H4 128 aa3,92□□□□□ -1,78
Gt(ROSA)26Sor-201ENSMUST00000124246 SvipQ3UZP4 77 aa3,71□□□□□ -1,82
Gt(ROSA)26Sor-201ENSMUST00000124246 Phgr1Q8K0G7 91 aa3,19□□□□□ -1,9
Gt(ROSA)26Sor-201ENSMUST00000124246 Ndufaf8A2AMZ4 74 aa2,98□□□□□ -1,93
Gt(ROSA)26Sor-201ENSMUST00000124246 Gm9112A2AI92 75 aa1,77□□□□□ -2,13
Retrieved 80 of 22,080 RNA–protein pairs in 12,4 ms