RNA–Protein interactions for RNA: ENSMUST00000117411.7

Ssbp1-203, Transcript of Single-stranded DNA-binding protein, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp1, Length 933 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1-203ENSMUST00000117411 Krtap19-4Q925H7 84 aa6,93□□□□□ -1,3
Ssbp1-203ENSMUST00000117411 Sec61gP60060 68 aa6,92□□□□□ -1,3
Ssbp1-203ENSMUST00000117411 Smim20D3Z7Q2 69 aa6,91□□□□□ -1,3
Ssbp1-203ENSMUST00000117411 Krtap4-16Q91W93 202 aa6,9□□□□□ -1,3
Ssbp1-203ENSMUST00000117411 Serp2Q6TAW2 65 aa6,89□□□□□ -1,31
Ssbp1-203ENSMUST00000117411 Krtap7-1Q9D3I6 87 aa6,78□□□□□ -1,32
Ssbp1-203ENSMUST00000117411 Mt1P02802 61 aaKnown RBP6,76□□□□□ -1,33
Ssbp1-203ENSMUST00000117411 Gm11938Q9D3H4 131 aa6,76□□□□□ -1,33
Ssbp1-203ENSMUST00000117411 Gm45618A0A1B0GSA0 219 aa6,75□□□□□ -1,33
Ssbp1-203ENSMUST00000117411 Gm7544A0A1Y7VJ58 118 aa6,75□□□□□ -1,33
Ssbp1-203ENSMUST00000117411 Atp5eP56382 52 aa6,7□□□□□ -1,34
Ssbp1-203ENSMUST00000117411 Fam240bJ3QMB3 78 aa6,66□□□□□ -1,34
Ssbp1-203ENSMUST00000117411 Pcp4l1Q6W8Q3 68 aa6,66□□□□□ -1,34
Ssbp1-203ENSMUST00000117411 H2al1aQ5M8Q2 105 aa6,62□□□□□ -1,35
Ssbp1-203ENSMUST00000117411 H2al1eQ810S6 105 aa6,62□□□□□ -1,35
Ssbp1-203ENSMUST00000117411 Uqcr11Q9CPX8 56 aa6,56□□□□□ -1,36
Ssbp1-203ENSMUST00000117411 Sprr2fO70557 76 aa6,54□□□□□ -1,36
Ssbp1-203ENSMUST00000117411 AhnakE9Q616 5656 aaKnown RBP6,49□□□□□ -1,37
Ssbp1-203ENSMUST00000117411 Krtap31-1Q9D644 177 aa6,41□□□□□ -1,38
Ssbp1-203ENSMUST00000117411 SnurfQ9WU12 71 aa6,34□□□□□ -1,39
Ssbp1-203ENSMUST00000117411 H2al1bA0A087WP11 105 aa6,32□□□□□ -1,4
Ssbp1-203ENSMUST00000117411 Lce3cQ91V05 98 aa6,31□□□□□ -1,4
Ssbp1-203ENSMUST00000117411 Mt3P28184 68 aa6,28□□□□□ -1,4
Ssbp1-203ENSMUST00000117411 Cdc42se1Q8BHL7 80 aa6,27□□□□□ -1,41
Ssbp1-203ENSMUST00000117411 SmcpP15265 143 aa6,23□□□□□ -1,41
Ssbp1-203ENSMUST00000117411 Phxr4P15974 95 aa6,21□□□□□ -1,42
Ssbp1-203ENSMUST00000117411 Gm10197F6QEY5 67 aa6,2□□□□□ -1,42
Ssbp1-203ENSMUST00000117411 Ndufb1P0DN34 57 aa6,2□□□□□ -1,42
Ssbp1-203ENSMUST00000117411 Lce3dE9Q8V1 98 aa6,19□□□□□ -1,42
Ssbp1-203ENSMUST00000117411 Smlr1J3QMJ4 66 aa6,15□□□□□ -1,42
Ssbp1-203ENSMUST00000117411 Anapc13Q8R034 74 aa6,15□□□□□ -1,42
Ssbp1-203ENSMUST00000117411 ObscnA2AAJ9 8891 aaKnown RBP6,11□□□□□ -1,43
Ssbp1-203ENSMUST00000117411 Pet100P0DJE0 76 aa6,09□□□□□ -1,43
Ssbp1-203ENSMUST00000117411 Gm3880A0A1B0GSB3 72 aa6,04□□□□□ -1,44
Ssbp1-203ENSMUST00000117411 4933415A04RikQ9D443 101 aa5,97□□□□□ -1,45
Ssbp1-203ENSMUST00000117411 Gm10100J3QK64 120 aa5,93□□□□□ -1,46
Ssbp1-203ENSMUST00000117411 Lce3eF8VQJ0 98 aa5,92□□□□□ -1,46
Ssbp1-203ENSMUST00000117411 Lce3fQ6PAI4 98 aa5,92□□□□□ -1,46
Ssbp1-203ENSMUST00000117411 Tmem258P61166 79 aa5,7□□□□□ -1,5
Ssbp1-203ENSMUST00000117411 H2al1mQ9DAD9 105 aa5,68□□□□□ -1,5
Ssbp1-203ENSMUST00000117411 Lce3aQ497I5 98 aa5,64□□□□□ -1,51
Ssbp1-203ENSMUST00000117411 A0A286YCP9 139 aa5,61□□□□□ -1,51
Ssbp1-203ENSMUST00000117411 4933428G20RikQ9D3X4 101 aa5,61□□□□□ -1,51
Ssbp1-203ENSMUST00000117411 H2al1kJ3QP08 105 aa5,57□□□□□ -1,52
Ssbp1-203ENSMUST00000117411 Tnp1P10856 55 aa5,57□□□□□ -1,52
Ssbp1-203ENSMUST00000117411 Brk1Q91VR8 75 aa5,56□□□□□ -1,52
Ssbp1-203ENSMUST00000117411 Gm19935A0A1B0GSF9 52 aa5,54□□□□□ -1,52
Ssbp1-203ENSMUST00000117411 Gm12216A0A1W2P827 62 aa5,54□□□□□ -1,52
Ssbp1-203ENSMUST00000117411 Sprr2eO70556 76 aa5,47□□□□□ -1,53
Ssbp1-203ENSMUST00000117411 Rps28P62858 69 aaKnown RBP5,46□□□□□ -1,54
Ssbp1-203ENSMUST00000117411 Romo1P60603 79 aa5,39□□□□□ -1,55
Ssbp1-203ENSMUST00000117411 A030003K21RikA0A1Y7VIM3 128 aa5,38□□□□□ -1,55
Ssbp1-203ENSMUST00000117411 Muc16A0A140LJ72 8478 aa5,3□□□□□ -1,56
Ssbp1-203ENSMUST00000117411 Gm10024A0A0A0MQA4 119 aa5,28□□□□□ -1,56
Ssbp1-203ENSMUST00000117411 Sprr2hO70559 108 aa5,24□□□□□ -1,57
Ssbp1-203ENSMUST00000117411 Gm29735A0A1B0GT06 219 aa5,14□□□□□ -1,59
Ssbp1-203ENSMUST00000117411 Gm6217A0A1Y7VJK9 128 aa5,12□□□□□ -1,59
Ssbp1-203ENSMUST00000117411 Sprr2dO70555 85 aa5,12□□□□□ -1,59
Ssbp1-203ENSMUST00000117411 Ndufs5Q99LY9 106 aa5,11□□□□□ -1,59
Ssbp1-203ENSMUST00000117411 Gm40193A0A1B0GT39 78 aa4,94□□□□□ -1,62
Ssbp1-203ENSMUST00000117411 Gm10142J3KMP7 120 aa4,89□□□□□ -1,63
Ssbp1-203ENSMUST00000117411 Gm11567Q9D141 195 aa4,88□□□□□ -1,63
Ssbp1-203ENSMUST00000117411 1110025L11RikO09048 78 aa4,69□□□□□ -1,66
Ssbp1-203ENSMUST00000117411 Krtap6-5Q925H3 78 aa4,69□□□□□ -1,66
Ssbp1-203ENSMUST00000117411 Gm3646F6S692 53 aa4,59□□□□□ -1,67
Ssbp1-203ENSMUST00000117411 Sox16Q62247 57 aa4,35□□□□□ -1,71
Ssbp1-203ENSMUST00000117411 Krtap5-1Q64507 230 aa4,26□□□□□ -1,73
Ssbp1-203ENSMUST00000117411 Gm10229O08631 77 aa4,24□□□□□ -1,73
Ssbp1-203ENSMUST00000117411 Sprr2bO70554 98 aa4,05□□□□□ -1,76
Ssbp1-203ENSMUST00000117411 Krtap6-2O08884 159 aa3,88□□□□□ -1,79
Ssbp1-203ENSMUST00000117411 Gm20538F6Z9R1 75 aa3,86□□□□□ -1,79
Ssbp1-203ENSMUST00000117411 Krtap21-1Q925H4 128 aa3,77□□□□□ -1,81
Ssbp1-203ENSMUST00000117411 Mp68P56379 58 aa3,69□□□□□ -1,82
Ssbp1-203ENSMUST00000117411 Pcp4P63054 62 aa3,56□□□□□ -1,84
Ssbp1-203ENSMUST00000117411 SvipQ3UZP4 77 aa3,41□□□□□ -1,86
Ssbp1-203ENSMUST00000117411 Gm10337F7DEP7 55 aa3,3□□□□□ -1,88
Ssbp1-203ENSMUST00000117411 Gm4559A4IF42 199 aa3,14□□□□□ -1,91
Ssbp1-203ENSMUST00000117411 Phgr1Q8K0G7 91 aa3,03□□□□□ -1,92
Ssbp1-203ENSMUST00000117411 Ndufaf8A2AMZ4 74 aa1,97□□□□□ -2,09
Ssbp1-203ENSMUST00000117411 Gm9112A2AI92 75 aa1,84□□□□□ -2,11
Retrieved 80 of 22,080 RNA–protein pairs in 9,8 ms