RNA–Protein interactions for RNA: ENSMUST00000112874.3

Nck1-201, Transcript of Cytoplasmic protein NCK1, mousemouse

TSL 1 (best) BASIC

Gene Nck1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1-201ENSMUST00000112874 Krtap19-4Q925H7 84 aa2.11□□□□□ -2.07
Nck1-201ENSMUST00000112874 Pkd1O08852 4293 aa2.1□□□□□ -2.07
Nck1-201ENSMUST00000112874 Herc2Q4U2R1 4836 aa2.09□□□□□ -2.07
Nck1-201ENSMUST00000112874 Fat1A0A1L1SQU7 4645 aa2.09□□□□□ -2.07
Nck1-201ENSMUST00000112874 Prm1P02319 51 aa2.09□□□□□ -2.07
Nck1-201ENSMUST00000112874 Dnah7aE9Q0T8 4024 aa2.08□□□□□ -2.08
Nck1-201ENSMUST00000112874 Sprr2dO70555 85 aa2.08□□□□□ -2.08
Nck1-201ENSMUST00000112874 Dnah9B1AR51 4484 aa2.08□□□□□ -2.08
Nck1-201ENSMUST00000112874 Stard9Q80TF6 4561 aa2.08□□□□□ -2.08
Nck1-201ENSMUST00000112874 PcloQ9QYX7 5068 aa2.07□□□□□ -2.08
Nck1-201ENSMUST00000112874 Herc1E9PZP8 4859 aa2.07□□□□□ -2.08
Nck1-201ENSMUST00000112874 HydinQ80W93 5154 aa2.07□□□□□ -2.08
Nck1-201ENSMUST00000112874 Kmt2cQ8BRH4 4903 aa2.06□□□□□ -2.08
Nck1-201ENSMUST00000112874 Dnah7cA0A087WR13 4024 aa2.06□□□□□ -2.08
Nck1-201ENSMUST00000112874 Dnah7bL7N1Y0 4068 aa2.06□□□□□ -2.08
Nck1-201ENSMUST00000112874 Gm7735D3YX18 52 aa2.06□□□□□ -2.08
Nck1-201ENSMUST00000112874 Dnah17Q69Z23 4481 aa2.06□□□□□ -2.08
Nck1-201ENSMUST00000112874 Ubr4A2AN08 5180 aa2.02□□□□□ -2.09
Nck1-201ENSMUST00000112874 Kiaa1109A2AAE1 5005 aa2.02□□□□□ -2.09
Nck1-201ENSMUST00000112874 Mycbp2Q7TPH6 4711 aa2□□□□□ -2.09
Nck1-201ENSMUST00000112874 Dnah8Q91XQ0 4731 aa1.99□□□□□ -2.09
Nck1-201ENSMUST00000112874 Gm9789Q8BIG3 52 aa1.99□□□□□ -2.09
Nck1-201ENSMUST00000112874 4932415D10RikA0A1W2P6U8 4986 aa1.97□□□□□ -2.09
Nck1-201ENSMUST00000112874 Krtap16-3Q8C1I6 86 aa1.96□□□□□ -2.09
Nck1-201ENSMUST00000112874 Dync1h1Q9JHU4 4644 aaKnown RBP1.96□□□□□ -2.1
Nck1-201ENSMUST00000112874 Gm10229O08631 77 aa1.96□□□□□ -2.1
Nck1-201ENSMUST00000112874 Dnhd1D3Z2X2 4750 aa1.95□□□□□ -2.1
Nck1-201ENSMUST00000112874 Krtap6-2O08884 159 aa1.95□□□□□ -2.1
Nck1-201ENSMUST00000112874 Vps13bQ80TY5 3993 aa1.94□□□□□ -2.1
Nck1-201ENSMUST00000112874 Pkhd1E9PZ36 4059 aa1.92□□□□□ -2.1
Nck1-201ENSMUST00000112874 Sprr2hO70559 108 aa1.91□□□□□ -2.1
Nck1-201ENSMUST00000112874 Ush2AQ2QI47 5193 aa1.91□□□□□ -2.1
Nck1-201ENSMUST00000112874 Dnah5Q8VHE6 4621 aa1.89□□□□□ -2.11
Nck1-201ENSMUST00000112874 Fat2Q5F226 4351 aa1.89□□□□□ -2.11
Nck1-201ENSMUST00000112874 Krtap4-16Q91W93 202 aa1.89□□□□□ -2.11
Nck1-201ENSMUST00000112874 Lrp2A2ARV4 4660 aa1.87□□□□□ -2.11
Nck1-201ENSMUST00000112874 Pkhd1l1Q80ZA4 4249 aa1.87□□□□□ -2.11
Nck1-201ENSMUST00000112874 Krtap19-5O08632 62 aa1.86□□□□□ -2.11
Nck1-201ENSMUST00000112874 Hmcn2A2AJ76 5100 aa1.86□□□□□ -2.11
Nck1-201ENSMUST00000112874 Lrp1bQ9JI18 4599 aa1.85□□□□□ -2.11
Nck1-201ENSMUST00000112874 Krtap8-1O08633 61 aa1.84□□□□□ -2.11
Nck1-201ENSMUST00000112874 Fat3Q8BNA6 4555 aa1.82□□□□□ -2.12
Nck1-201ENSMUST00000112874 Lrp1Q91ZX7 4545 aaKnown RBP1.77□□□□□ -2.13
Nck1-201ENSMUST00000112874 Krtap19-9bQ99NG9 58 aa1.77□□□□□ -2.13
Nck1-201ENSMUST00000112874 Lce3eF8VQJ0 98 aa1.76□□□□□ -2.13
Nck1-201ENSMUST00000112874 Syne2Q6ZWQ0 6874 aaKnown RBP1.76□□□□□ -2.13
Nck1-201ENSMUST00000112874 Fat4Q2PZL6 4981 aa1.75□□□□□ -2.13
Nck1-201ENSMUST00000112874 ZanO88799 5376 aa1.74□□□□□ -2.13
Nck1-201ENSMUST00000112874 Gm10061D3Z714 54 aa1.74□□□□□ -2.13
Nck1-201ENSMUST00000112874 Rnf213E9Q555 5152 aaKnown RBP1.68□□□□□ -2.14
Nck1-201ENSMUST00000112874 Krtap19-9aF8WH65 55 aa1.66□□□□□ -2.14
Nck1-201ENSMUST00000112874 Syne1Q6ZWR6 8799 aa1.62□□□□□ -2.15
Nck1-201ENSMUST00000112874 Krtap22-2J3QNX6 67 aa1.61□□□□□ -2.15
Nck1-201ENSMUST00000112874 Lce3bQ9CQM7 98 aa1.59□□□□□ -2.16
Nck1-201ENSMUST00000112874 Muc5bE9Q5I3 4800 aa1.59□□□□□ -2.16
Nck1-201ENSMUST00000112874 SspoQ8CG65 4998 aa1.58□□□□□ -2.16
Nck1-201ENSMUST00000112874 Krtap6-3A0A087WQL6 57 aa1.58□□□□□ -2.16
Nck1-201ENSMUST00000112874 Krtap19-2Q925I0 141 aa1.58□□□□□ -2.16
Nck1-201ENSMUST00000112874 Mdn1A2ANY6 5589 aaKnown RBP1.55□□□□□ -2.16
Nck1-201ENSMUST00000112874 Fsip2A2ARZ3 6995 aa1.5□□□□□ -2.17
Nck1-201ENSMUST00000112874 ObscnA2AAJ9 8891 aaKnown RBP1.49□□□□□ -2.17
Nck1-201ENSMUST00000112874 Mt4P47945 62 aa1.47□□□□□ -2.17
Nck1-201ENSMUST00000112874 Krtap20-2E9Q0A8 60 aa1.46□□□□□ -2.18
Nck1-201ENSMUST00000112874 Krtap19-1Q925H2 87 aa1.45□□□□□ -2.18
Nck1-201ENSMUST00000112874 Eppk1Q8R0W0 6548 aa1.4□□□□□ -2.19
Nck1-201ENSMUST00000112874 Gm11639A0A1D5RLM8 5808 aa1.34□□□□□ -2.19
Nck1-201ENSMUST00000112874 Gm6358A0A087WPH4 74 aa1.33□□□□□ -2.2
Nck1-201ENSMUST00000112874 Krtap21-1Q925H4 128 aa1.31□□□□□ -2.2
Nck1-201ENSMUST00000112874 Gpr98Q8VHN7 6298 aaKnown RBP1.3□□□□□ -2.2
Nck1-201ENSMUST00000112874 1110025L11RikO09048 78 aa1.3□□□□□ -2.2
Nck1-201ENSMUST00000112874 Sprr2bO70554 98 aa1.27□□□□□ -2.21
Nck1-201ENSMUST00000112874 Macf1Q9QXZ0 7354 aaKnown RBP1.24□□□□□ -2.21
Nck1-201ENSMUST00000112874 Muc19Q6PZE0 7524 aa1.21□□□□□ -2.22
Nck1-201ENSMUST00000112874 Mt2P02798 61 aa1.19□□□□□ -2.22
Nck1-201ENSMUST00000112874 DstQ91ZU6 7393 aaKnown RBP1.14□□□□□ -2.23
Nck1-201ENSMUST00000112874 NebE9Q1W3 7152 aa1.11□□□□□ -2.23
Nck1-201ENSMUST00000112874 Mt1P02802 61 aaKnown RBP1.11□□□□□ -2.23
Nck1-201ENSMUST00000112874 Phgr1Q8K0G7 91 aa1.11□□□□□ -2.23
Nck1-201ENSMUST00000112874 AhnakE9Q616 5656 aaKnown RBP1□□□□□ -2.25
Nck1-201ENSMUST00000112874 Muc16A0A140LJ72 8478 aa0.92□□□□□ -2.26
Retrieved 80 of 22,080 RNA–protein pairs in 83.7 ms