RNA–Protein interactions for RNA: ENSMUST00000202681.3

Pdgfra-208, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 2,876 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-208ENSMUST00000202681 SacsQ9JLC8 4582 aa4.68□□□□□ -1.66
Pdgfra-208ENSMUST00000202681 A030005K14RikA0A1Y7VNY1 122 aa4.67□□□□□ -1.66
Pdgfra-208ENSMUST00000202681 Gm11563B1AQ90 168 aa4.67□□□□□ -1.66
Pdgfra-208ENSMUST00000202681 Krtap4-7Q9D732 168 aa4.67□□□□□ -1.66
Pdgfra-208ENSMUST00000202681 Kmt2cQ8BRH4 4903 aa4.66□□□□□ -1.66
Pdgfra-208ENSMUST00000202681 Abca13Q5SSE9 5034 aa4.65□□□□□ -1.67
Pdgfra-208ENSMUST00000202681 Gm10382Q3V0T5 144 aa4.64□□□□□ -1.67
Pdgfra-208ENSMUST00000202681 Ndufaf8A2AMZ4 74 aa4.63□□□□□ -1.67
Pdgfra-208ENSMUST00000202681 Rpl37Q9D823 97 aa4.62□□□□□ -1.67
Pdgfra-208ENSMUST00000202681 Fat2Q5F226 4351 aa4.6□□□□□ -1.67
Pdgfra-208ENSMUST00000202681 Lce1jD3YUU5 139 aa4.6□□□□□ -1.67
Pdgfra-208ENSMUST00000202681 Pkhd1l1Q80ZA4 4249 aa4.6□□□□□ -1.67
Pdgfra-208ENSMUST00000202681 LorP18165 486 aa4.58□□□□□ -1.68
Pdgfra-208ENSMUST00000202681 HydinQ80W93 5154 aa4.57□□□□□ -1.68
Pdgfra-208ENSMUST00000202681 Mycbp2Q7TPH6 4711 aa4.57□□□□□ -1.68
Pdgfra-208ENSMUST00000202681 Kiaa1109A2AAE1 5005 aa4.56□□□□□ -1.68
Pdgfra-208ENSMUST00000202681 Gm17606F6ZL36 78 aa4.55□□□□□ -1.68
Pdgfra-208ENSMUST00000202681 Herc2Q4U2R1 4836 aa4.54□□□□□ -1.68
Pdgfra-208ENSMUST00000202681 PcloQ9QYX7 5068 aa4.54□□□□□ -1.68
Pdgfra-208ENSMUST00000202681 Vps13bQ80TY5 3993 aa4.54□□□□□ -1.68
Pdgfra-208ENSMUST00000202681 Gm9736A0A1W2P7N1 277 aa4.52□□□□□ -1.69
Pdgfra-208ENSMUST00000202681 Fat3Q8BNA6 4555 aa4.51□□□□□ -1.69
Pdgfra-208ENSMUST00000202681 Rps29P62274 56 aa4.5□□□□□ -1.69
Pdgfra-208ENSMUST00000202681 Dnah8Q91XQ0 4731 aa4.47□□□□□ -1.69
Pdgfra-208ENSMUST00000202681 Krtap19-5O08632 62 aa4.45□□□□□ -1.7
Pdgfra-208ENSMUST00000202681 Lrp2A2ARV4 4660 aa4.42□□□□□ -1.7
Pdgfra-208ENSMUST00000202681 Krtap4-2B1AQ85 167 aa4.42□□□□□ -1.7
Pdgfra-208ENSMUST00000202681 Birc6O88738 4882 aa4.4□□□□□ -1.7
Pdgfra-208ENSMUST00000202681 Krtap7-1Q9D3I6 87 aa4.4□□□□□ -1.71
Pdgfra-208ENSMUST00000202681 Gm19426M0QWC7 77 aa4.39□□□□□ -1.71
Pdgfra-208ENSMUST00000202681 Dnhd1D3Z2X2 4750 aa4.38□□□□□ -1.71
Pdgfra-208ENSMUST00000202681 Gm11555B1AQ89 175 aa4.37□□□□□ -1.71
Pdgfra-208ENSMUST00000202681 Gm5965D3Z724 196 aa4.37□□□□□ -1.71
Pdgfra-208ENSMUST00000202681 Lce1bQ9D149 137 aa4.37□□□□□ -1.71
Pdgfra-208ENSMUST00000202681 Gm5767A0A0J9YTU8 78 aa4.36□□□□□ -1.71
Pdgfra-208ENSMUST00000202681 Lce1hQ9D6R3 140 aa4.34□□□□□ -1.71
Pdgfra-208ENSMUST00000202681 Lce1mQ9CR91 182 aa4.33□□□□□ -1.72
Pdgfra-208ENSMUST00000202681 Herc1E9PZP8 4859 aa4.33□□□□□ -1.72
Pdgfra-208ENSMUST00000202681 B930094E09RikQ8C4T2 136 aa4.32□□□□□ -1.72
Pdgfra-208ENSMUST00000202681 Gm9112A2AI92 75 aa4.32□□□□□ -1.72
Pdgfra-208ENSMUST00000202681 Krtap17-1A2A5X6 109 aa4.29□□□□□ -1.72
Pdgfra-208ENSMUST00000202681 Gm40193A0A1B0GT39 78 aa4.28□□□□□ -1.73
Pdgfra-208ENSMUST00000202681 Gm19668J3QMD1 248 aa4.26□□□□□ -1.73
Pdgfra-208ENSMUST00000202681 Gm17416Q30KP4 66 aa4.22□□□□□ -1.73
Pdgfra-208ENSMUST00000202681 Ubr4A2AN08 5180 aa4.14□□□□□ -1.75
Pdgfra-208ENSMUST00000202681 BC029722A0A0N4SW31 51 aa4.12□□□□□ -1.75
Pdgfra-208ENSMUST00000202681 Gm10318A0A1W2P728 225 aa4.12□□□□□ -1.75
Pdgfra-208ENSMUST00000202681 Gm17402F6Z0L5 76 aa4.11□□□□□ -1.75
Pdgfra-208ENSMUST00000202681 Crct1Q6PAI5 102 aa4.11□□□□□ -1.75
Pdgfra-208ENSMUST00000202681 Lce1eQ9D139 143 aa4.1□□□□□ -1.75
Pdgfra-208ENSMUST00000202681 Gm19402J3QJV4 266 aa4.1□□□□□ -1.75
Pdgfra-208ENSMUST00000202681 Ush2AQ2QI47 5193 aa4.07□□□□□ -1.76
Pdgfra-208ENSMUST00000202681 A0A1Y7VJ07 166 aa4.05□□□□□ -1.76
Pdgfra-208ENSMUST00000202681 Camk2n1Q6QWF9 78 aa4.03□□□□□ -1.76
Pdgfra-208ENSMUST00000202681 Gm18596A0A1W2P860 280 aa4.02□□□□□ -1.77
Pdgfra-208ENSMUST00000202681 Krtap13-1Q8K198 168 aa4.02□□□□□ -1.77
Pdgfra-208ENSMUST00000202681 Hmcn2A2AJ76 5100 aa3.99□□□□□ -1.77
Pdgfra-208ENSMUST00000202681 A030003K21RikA0A1Y7VIM3 128 aa3.99□□□□□ -1.77
Pdgfra-208ENSMUST00000202681 Gm6217A0A1Y7VJK9 128 aa3.98□□□□□ -1.77
Pdgfra-208ENSMUST00000202681 Sprr2a3Q4KL71 83 aa3.96□□□□□ -1.77
Pdgfra-208ENSMUST00000202681 Sprr2a1Q9CQK8 83 aa3.96□□□□□ -1.77
Pdgfra-208ENSMUST00000202681 ZanO88799 5376 aa3.96□□□□□ -1.78
Pdgfra-208ENSMUST00000202681 Krtap1-3A2A588 173 aa3.95□□□□□ -1.78
Pdgfra-208ENSMUST00000202681 A0A286YCP9 139 aa3.94□□□□□ -1.78
Pdgfra-208ENSMUST00000202681 Fat4Q2PZL6 4981 aa3.93□□□□□ -1.78
Pdgfra-208ENSMUST00000202681 4932415D10RikA0A1W2P6U8 4986 aa3.91□□□□□ -1.78
Pdgfra-208ENSMUST00000202681 Gm11559Q9D3H7 191 aa3.89□□□□□ -1.79
Pdgfra-208ENSMUST00000202681 Spink7Q6IE32 76 aa3.88□□□□□ -1.79
Pdgfra-208ENSMUST00000202681 Krtap1-5A2A590 122 aa3.87□□□□□ -1.79
Pdgfra-208ENSMUST00000202681 A030014E15RikA0A1Y7VJV2 120 aa3.84□□□□□ -1.79
Pdgfra-208ENSMUST00000202681 Rnf213E9Q555 5152 aaKnown RBP3.84□□□□□ -1.8
Pdgfra-208ENSMUST00000202681 Gm38119A0A0A6YX29 146 aa3.83□□□□□ -1.8
Pdgfra-208ENSMUST00000202681 Krtap16-3Q8C1I6 86 aa3.82□□□□□ -1.8
Pdgfra-208ENSMUST00000202681 Krtap19-3Q925H6 87 aa3.77□□□□□ -1.81
Pdgfra-208ENSMUST00000202681 Tnp1P10856 55 aa3.77□□□□□ -1.81
Pdgfra-208ENSMUST00000202681 Krtap19-1Q925H2 87 aa3.76□□□□□ -1.81
Pdgfra-208ENSMUST00000202681 Gm9789Q8BIG3 52 aa3.76□□□□□ -1.81
Pdgfra-208ENSMUST00000202681 Gm7735D3YX18 52 aa3.74□□□□□ -1.81
Pdgfra-208ENSMUST00000202681 Prm1P02319 51 aa3.68□□□□□ -1.82
Pdgfra-208ENSMUST00000202681 Gm11562A0PK51 136 aa3.62□□□□□ -1.83
Pdgfra-208ENSMUST00000202681 Krtap1-4Q3V2D6 188 aa3.59□□□□□ -1.83
Pdgfra-208ENSMUST00000202681 2310046K23RikA0A0A6YVW6 87 aa3.57□□□□□ -1.84
Pdgfra-208ENSMUST00000202681 SspoQ8CG65 4998 aa3.47□□□□□ -1.85
Pdgfra-208ENSMUST00000202681 Mdn1A2ANY6 5589 aaKnown RBP3.42□□□□□ -1.86
Pdgfra-208ENSMUST00000202681 Gm10061D3Z714 54 aa3.41□□□□□ -1.86
Pdgfra-208ENSMUST00000202681 Krtap8-1O08633 61 aa3.41□□□□□ -1.86
Pdgfra-208ENSMUST00000202681 Krtap12-1Q9Z287 130 aa3.39□□□□□ -1.87
Pdgfra-208ENSMUST00000202681 Krtap9-5A2A5X3 358 aa3.38□□□□□ -1.87
Pdgfra-208ENSMUST00000202681 Krtap19-9aF8WH65 55 aa3.37□□□□□ -1.87
Pdgfra-208ENSMUST00000202681 Krtap19-2Q925I0 141 aa3.36□□□□□ -1.87
Pdgfra-208ENSMUST00000202681 Krtap19-9bQ99NG9 58 aa3.33□□□□□ -1.88
Pdgfra-208ENSMUST00000202681 Lce1dQ9D731 133 aa3.32□□□□□ -1.88
Pdgfra-208ENSMUST00000202681 Gm11569B1AQB1 180 aa3.31□□□□□ -1.88
Pdgfra-208ENSMUST00000202681 Krtap9-3Q3V2C1 136 aa3.3□□□□□ -1.88
Pdgfra-208ENSMUST00000202681 Lce1iQ9D6P5 149 aa3.3□□□□□ -1.88
Pdgfra-208ENSMUST00000202681 Lce1a2Q9D1K4 149 aa3.27□□□□□ -1.89
Pdgfra-208ENSMUST00000202681 Muc5bE9Q5I3 4800 aa3.25□□□□□ -1.89
Pdgfra-208ENSMUST00000202681 4933428G20RikQ9D3X4 101 aa3.21□□□□□ -1.9
Pdgfra-208ENSMUST00000202681 Gm6358A0A087WPH4 74 aa3.18□□□□□ -1.9
Pdgfra-208ENSMUST00000202681 Sprr2gO70558 76 aa3.18□□□□□ -1.9
Retrieved 100 of 22,080 RNA–protein pairs in 70.7 ms