RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Sprr2gO70558 76 aa4.26□□□□□ -1.73
Scn8a-213ENSMUST00000201549 Vps13bQ80TY5 3993 aa4.25□□□□□ -1.73
Scn8a-213ENSMUST00000201549 Dnah2P0C6F1 4456 aa4.24□□□□□ -1.73
Scn8a-213ENSMUST00000201549 Vps13dB1ART2 4390 aa4.24□□□□□ -1.73
Scn8a-213ENSMUST00000201549 Dync2h1Q45VK7 4306 aa4.21□□□□□ -1.74
Scn8a-213ENSMUST00000201549 Gm19402J3QJV4 266 aa4.21□□□□□ -1.74
Scn8a-213ENSMUST00000201549 Dnah7aE9Q0T8 4024 aa4.19□□□□□ -1.74
Scn8a-213ENSMUST00000201549 ApobE9Q414 4505 aa4.19□□□□□ -1.74
Scn8a-213ENSMUST00000201549 PlecQ9QXS1 4691 aaKnown RBP4.17□□□□□ -1.74
Scn8a-213ENSMUST00000201549 Fras1Q80T14 4010 aa4.16□□□□□ -1.74
Scn8a-213ENSMUST00000201549 Krtap8-1O08633 61 aa4.15□□□□□ -1.75
Scn8a-213ENSMUST00000201549 Hectd4E9Q2E4 4418 aa4.1□□□□□ -1.75
Scn8a-213ENSMUST00000201549 Stard9Q80TF6 4561 aa4.06□□□□□ -1.76
Scn8a-213ENSMUST00000201549 Krtap7-1Q9D3I6 87 aa4.04□□□□□ -1.76
Scn8a-213ENSMUST00000201549 Lrp1bQ9JI18 4599 aa4.02□□□□□ -1.77
Scn8a-213ENSMUST00000201549 Krtap1-5A2A590 122 aa4.01□□□□□ -1.77
Scn8a-213ENSMUST00000201549 SacsQ9JLC8 4582 aa4□□□□□ -1.77
Scn8a-213ENSMUST00000201549 Pkd1O08852 4293 aa4□□□□□ -1.77
Scn8a-213ENSMUST00000201549 Lrp1Q91ZX7 4545 aaKnown RBP3.99□□□□□ -1.77
Scn8a-213ENSMUST00000201549 Sprr2a3Q4KL71 83 aa3.99□□□□□ -1.77
Scn8a-213ENSMUST00000201549 Sprr2a1Q9CQK8 83 aa3.99□□□□□ -1.77
Scn8a-213ENSMUST00000201549 Fat2Q5F226 4351 aa3.98□□□□□ -1.77
Scn8a-213ENSMUST00000201549 2310046K23RikA0A0A6YVW6 87 aa3.95□□□□□ -1.78
Scn8a-213ENSMUST00000201549 LorP18165 486 aa3.91□□□□□ -1.78
Scn8a-213ENSMUST00000201549 Dync1h1Q9JHU4 4644 aaKnown RBP3.89□□□□□ -1.79
Scn8a-213ENSMUST00000201549 Fat3Q8BNA6 4555 aa3.88□□□□□ -1.79
Scn8a-213ENSMUST00000201549 Krtap1-4Q3V2D6 188 aa3.87□□□□□ -1.79
Scn8a-213ENSMUST00000201549 Fat1A0A1L1SQU7 4645 aa3.86□□□□□ -1.79
Scn8a-213ENSMUST00000201549 Mycbp2Q7TPH6 4711 aa3.85□□□□□ -1.79
Scn8a-213ENSMUST00000201549 Krtap19-9aF8WH65 55 aa3.85□□□□□ -1.79
Scn8a-213ENSMUST00000201549 Pkhd1l1Q80ZA4 4249 aa3.75□□□□□ -1.81
Scn8a-213ENSMUST00000201549 Sprr2fO70557 76 aa3.75□□□□□ -1.81
Scn8a-213ENSMUST00000201549 Krtap12-1Q9Z287 130 aa3.72□□□□□ -1.81
Scn8a-213ENSMUST00000201549 Gm38119A0A0A6YX29 146 aa3.7□□□□□ -1.82
Scn8a-213ENSMUST00000201549 Pkhd1E9PZ36 4059 aa3.7□□□□□ -1.82
Scn8a-213ENSMUST00000201549 Lce3bQ9CQM7 98 aa3.7□□□□□ -1.82
Scn8a-213ENSMUST00000201549 Krtap19-9bQ99NG9 58 aa3.7□□□□□ -1.82
Scn8a-213ENSMUST00000201549 Krtap16-3Q8C1I6 86 aa3.68□□□□□ -1.82
Scn8a-213ENSMUST00000201549 Lce1jD3YUU5 139 aa3.68□□□□□ -1.82
Scn8a-213ENSMUST00000201549 Lce1gQ9D195 139 aa3.68□□□□□ -1.82
Scn8a-213ENSMUST00000201549 Lce1iQ9D6P5 149 aa3.68□□□□□ -1.82
Scn8a-213ENSMUST00000201549 Lce1hQ9D6R3 140 aa3.68□□□□□ -1.82
Scn8a-213ENSMUST00000201549 Sprr2iO70560 76 aa3.66□□□□□ -1.82
Scn8a-213ENSMUST00000201549 Lce3cQ91V05 98 aa3.66□□□□□ -1.82
Scn8a-213ENSMUST00000201549 Ryr3A2AGL3 4863 aa3.64□□□□□ -1.83
Scn8a-213ENSMUST00000201549 Ryr1E9PZQ0 5035 aa3.63□□□□□ -1.83
Scn8a-213ENSMUST00000201549 Krtap19-3Q925H6 87 aa3.62□□□□□ -1.83
Scn8a-213ENSMUST00000201549 Gm10272F7CZ33 110 aa3.6□□□□□ -1.83
Scn8a-213ENSMUST00000201549 Dnah8Q91XQ0 4731 aa3.6□□□□□ -1.83
Scn8a-213ENSMUST00000201549 Lce1mQ9CR91 182 aa3.57□□□□□ -1.84
Scn8a-213ENSMUST00000201549 Lrp2A2ARV4 4660 aa3.56□□□□□ -1.84
Scn8a-213ENSMUST00000201549 Krtap19-1Q925H2 87 aa3.55□□□□□ -1.84
Scn8a-213ENSMUST00000201549 Lce3eF8VQJ0 98 aa3.53□□□□□ -1.84
Scn8a-213ENSMUST00000201549 Lce3fQ6PAI4 98 aa3.53□□□□□ -1.84
Scn8a-213ENSMUST00000201549 Krtap9-5A2A5X3 358 aa3.5□□□□□ -1.85
Scn8a-213ENSMUST00000201549 Gm10100J3QK64 120 aa3.49□□□□□ -1.85
Scn8a-213ENSMUST00000201549 Lce3dE9Q8V1 98 aa3.47□□□□□ -1.85
Scn8a-213ENSMUST00000201549 Kmt2cQ8BRH4 4903 aa3.42□□□□□ -1.86
Scn8a-213ENSMUST00000201549 Lce3aQ497I5 98 aa3.41□□□□□ -1.86
Scn8a-213ENSMUST00000201549 HydinQ80W93 5154 aa3.4□□□□□ -1.86
Scn8a-213ENSMUST00000201549 Ryr2E9Q401 4966 aaKnown RBP3.39□□□□□ -1.87
Scn8a-213ENSMUST00000201549 Sprr2eO70556 76 aa3.39□□□□□ -1.87
Scn8a-213ENSMUST00000201549 Krtap1-3A2A588 173 aa3.38□□□□□ -1.87
Scn8a-213ENSMUST00000201549 Gm10142J3KMP7 120 aa3.38□□□□□ -1.87
Scn8a-213ENSMUST00000201549 Herc2Q4U2R1 4836 aa3.36□□□□□ -1.87
Scn8a-213ENSMUST00000201549 Gm10024A0A0A0MQA4 119 aa3.33□□□□□ -1.88
Scn8a-213ENSMUST00000201549 Lce1bQ9D149 137 aa3.32□□□□□ -1.88
Scn8a-213ENSMUST00000201549 Kiaa1109A2AAE1 5005 aa3.31□□□□□ -1.88
Scn8a-213ENSMUST00000201549 Abca13Q5SSE9 5034 aa3.31□□□□□ -1.88
Scn8a-213ENSMUST00000201549 Mt2P02798 61 aa3.3□□□□□ -1.88
Scn8a-213ENSMUST00000201549 Krtap19-2Q925I0 141 aa3.3□□□□□ -1.88
Scn8a-213ENSMUST00000201549 Lce1fB9EJP6 147 aa3.29□□□□□ -1.88
Scn8a-213ENSMUST00000201549 Lce1cQ9D1C5 147 aa3.29□□□□□ -1.88
Scn8a-213ENSMUST00000201549 Lce1lQ9D1G7 135 aa3.29□□□□□ -1.88
Scn8a-213ENSMUST00000201549 Lce1dQ9D731 133 aa3.29□□□□□ -1.88
Scn8a-213ENSMUST00000201549 Lce1eQ9D139 143 aa3.24□□□□□ -1.89
Scn8a-213ENSMUST00000201549 Prm1P02319 51 aa3.23□□□□□ -1.89
Scn8a-213ENSMUST00000201549 Krtap31-1Q9D644 177 aa3.21□□□□□ -1.9
Scn8a-213ENSMUST00000201549 Krtap22-2J3QNX6 67 aa3.19□□□□□ -1.9
Scn8a-213ENSMUST00000201549 Gm9789Q8BIG3 52 aa3.18□□□□□ -1.9
Scn8a-213ENSMUST00000201549 Gm7735D3YX18 52 aa3.18□□□□□ -1.9
Scn8a-213ENSMUST00000201549 Dnhd1D3Z2X2 4750 aa3.17□□□□□ -1.9
Scn8a-213ENSMUST00000201549 Krtap4-2B1AQ85 167 aa3.16□□□□□ -1.9
Scn8a-213ENSMUST00000201549 Mt4P47945 62 aa3.16□□□□□ -1.9
Scn8a-213ENSMUST00000201549 Sprr2hO70559 108 aa3.15□□□□□ -1.91
Scn8a-213ENSMUST00000201549 PcloQ9QYX7 5068 aa3.14□□□□□ -1.91
Scn8a-213ENSMUST00000201549 Lce1a2Q9D1K4 149 aa3.13□□□□□ -1.91
Scn8a-213ENSMUST00000201549 Sprr2dO70555 85 aa3.12□□□□□ -1.91
Scn8a-213ENSMUST00000201549 Krtap17-1A2A5X6 109 aa3.11□□□□□ -1.91
Scn8a-213ENSMUST00000201549 Krtap19-4Q925H7 84 aa3.11□□□□□ -1.91
Scn8a-213ENSMUST00000201549 Krtap31-2Q8CAY5 177 aa3.08□□□□□ -1.92
Scn8a-213ENSMUST00000201549 Gm11569B1AQB1 180 aa3.07□□□□□ -1.92
Scn8a-213ENSMUST00000201549 Herc1E9PZP8 4859 aa3.07□□□□□ -1.92
Scn8a-213ENSMUST00000201549 Gm10061D3Z714 54 aa3.06□□□□□ -1.92
Scn8a-213ENSMUST00000201549 Birc6O88738 4882 aa3.06□□□□□ -1.92
Scn8a-213ENSMUST00000201549 Krtap9-3Q3V2C1 136 aa3.05□□□□□ -1.92
Scn8a-213ENSMUST00000201549 Hmcn2A2AJ76 5100 aa3.02□□□□□ -1.93
Scn8a-213ENSMUST00000201549 Mdn1A2ANY6 5589 aaKnown RBP2.98□□□□□ -1.93
Scn8a-213ENSMUST00000201549 Krtap4-6Q3V4B7 195 aa2.95□□□□□ -1.94
Scn8a-213ENSMUST00000201549 4932415D10RikA0A1W2P6U8 4986 aa2.93□□□□□ -1.94
Retrieved 100 of 22,080 RNA–protein pairs in 121 ms