RNA–Protein interactions for RNA: ENSMUST00000168878.7

Shroom3-204, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 5,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-204ENSMUST00000168878 BsnO88737 3942 aa6.57□□□□□ -1.36
Shroom3-204ENSMUST00000168878 Dnah11E9Q7N9 4488 aa6.55□□□□□ -1.36
Shroom3-204ENSMUST00000168878 Csmd3Q80T79 3707 aa6.53□□□□□ -1.36
Shroom3-204ENSMUST00000168878 Dync2h1Q45VK7 4306 aa6.52□□□□□ -1.37
Shroom3-204ENSMUST00000168878 Dnah2P0C6F1 4456 aa6.5□□□□□ -1.37
Shroom3-204ENSMUST00000168878 Hspg2Q05793 3707 aaKnown RBP6.5□□□□□ -1.37
Shroom3-204ENSMUST00000168878 SacsQ9JLC8 4582 aa6.48□□□□□ -1.37
Shroom3-204ENSMUST00000168878 Dync1h1Q9JHU4 4644 aaKnown RBP6.48□□□□□ -1.37
Shroom3-204ENSMUST00000168878 ApobE9Q414 4505 aa6.47□□□□□ -1.37
Shroom3-204ENSMUST00000168878 Xirp2Q4U4S6 3784 aa6.47□□□□□ -1.37
Shroom3-204ENSMUST00000168878 Dnah9B1AR51 4484 aa6.46□□□□□ -1.38
Shroom3-204ENSMUST00000168878 TnxbO35452 4006 aa6.41□□□□□ -1.38
Shroom3-204ENSMUST00000168878 Krtap16-3Q8C1I6 86 aa6.38□□□□□ -1.39
Shroom3-204ENSMUST00000168878 Lce1mQ9CR91 182 aa6.36□□□□□ -1.39
Shroom3-204ENSMUST00000168878 Krtap19-3Q925H6 87 aa6.36□□□□□ -1.39
Shroom3-204ENSMUST00000168878 Fat1A0A1L1SQU7 4645 aa6.33□□□□□ -1.4
Shroom3-204ENSMUST00000168878 Dnah1E9Q8T7 4250 aa6.33□□□□□ -1.4
Shroom3-204ENSMUST00000168878 PrkdcP97313 4128 aa6.32□□□□□ -1.4
Shroom3-204ENSMUST00000168878 Lrp1bQ9JI18 4599 aa6.31□□□□□ -1.4
Shroom3-204ENSMUST00000168878 Krtap9-5A2A5X3 358 aa6.31□□□□□ -1.4
Shroom3-204ENSMUST00000168878 2310046K23RikA0A0A6YVW6 87 aa6.29□□□□□ -1.4
Shroom3-204ENSMUST00000168878 Dnah7bL7N1Y0 4068 aa6.28□□□□□ -1.4
Shroom3-204ENSMUST00000168878 Dnah3Q8BW94 4083 aa6.27□□□□□ -1.41
Shroom3-204ENSMUST00000168878 Dnah8Q91XQ0 4731 aa6.27□□□□□ -1.41
Shroom3-204ENSMUST00000168878 Mycbp2Q7TPH6 4711 aa6.26□□□□□ -1.41
Shroom3-204ENSMUST00000168878 Gm10100J3QK64 120 aa6.26□□□□□ -1.41
Shroom3-204ENSMUST00000168878 Lce3bQ9CQM7 98 aa6.24□□□□□ -1.41
Shroom3-204ENSMUST00000168878 Ryr1E9PZQ0 5035 aa6.24□□□□□ -1.41
Shroom3-204ENSMUST00000168878 Sprr2gO70558 76 aa6.22□□□□□ -1.41
Shroom3-204ENSMUST00000168878 Krtap19-1Q925H2 87 aa6.22□□□□□ -1.41
Shroom3-204ENSMUST00000168878 Pkd1O08852 4293 aa6.21□□□□□ -1.42
Shroom3-204ENSMUST00000168878 Gm10272F7CZ33 110 aa6.19□□□□□ -1.42
Shroom3-204ENSMUST00000168878 Lce3cQ91V05 98 aa6.18□□□□□ -1.42
Shroom3-204ENSMUST00000168878 Dnah6E9Q0B6 4144 aa6.12□□□□□ -1.43
Shroom3-204ENSMUST00000168878 Gm10142J3KMP7 120 aa6.11□□□□□ -1.43
Shroom3-204ENSMUST00000168878 Kmt2aP55200 3966 aa6.1□□□□□ -1.43
Shroom3-204ENSMUST00000168878 Hectd4E9Q2E4 4418 aa6.1□□□□□ -1.43
Shroom3-204ENSMUST00000168878 Fat3Q8BNA6 4555 aa6.06□□□□□ -1.44
Shroom3-204ENSMUST00000168878 Mt2P02798 61 aa6.03□□□□□ -1.44
Shroom3-204ENSMUST00000168878 Krtap22-2J3QNX6 67 aa6.03□□□□□ -1.44
Shroom3-204ENSMUST00000168878 Lce3eF8VQJ0 98 aa6.02□□□□□ -1.44
Shroom3-204ENSMUST00000168878 Lce3fQ6PAI4 98 aa6.02□□□□□ -1.44
Shroom3-204ENSMUST00000168878 Prm1P02319 51 aa6.02□□□□□ -1.45
Shroom3-204ENSMUST00000168878 Fras1Q80T14 4010 aa5.95□□□□□ -1.46
Shroom3-204ENSMUST00000168878 Lce3dE9Q8V1 98 aa5.95□□□□□ -1.46
Shroom3-204ENSMUST00000168878 Dnhd1D3Z2X2 4750 aa5.92□□□□□ -1.46
Shroom3-204ENSMUST00000168878 Lrp1Q91ZX7 4545 aaKnown RBP5.92□□□□□ -1.46
Shroom3-204ENSMUST00000168878 Ryr2E9Q401 4966 aaKnown RBP5.9□□□□□ -1.46
Shroom3-204ENSMUST00000168878 Krtap19-2Q925I0 141 aa5.9□□□□□ -1.46
Shroom3-204ENSMUST00000168878 Ryr3A2AGL3 4863 aa5.86□□□□□ -1.47
Shroom3-204ENSMUST00000168878 Lce3aQ497I5 98 aa5.86□□□□□ -1.47
Shroom3-204ENSMUST00000168878 Lce1jD3YUU5 139 aa5.81□□□□□ -1.48
Shroom3-204ENSMUST00000168878 Gm7735D3YX18 52 aa5.78□□□□□ -1.48
Shroom3-204ENSMUST00000168878 Dnah7aE9Q0T8 4024 aa5.76□□□□□ -1.49
Shroom3-204ENSMUST00000168878 Krtap1-3A2A588 173 aa5.76□□□□□ -1.49
Shroom3-204ENSMUST00000168878 Sprr2iO70560 76 aa5.74□□□□□ -1.49
Shroom3-204ENSMUST00000168878 Herc2Q4U2R1 4836 aa5.74□□□□□ -1.49
Shroom3-204ENSMUST00000168878 Herc1E9PZP8 4859 aa5.72□□□□□ -1.49
Shroom3-204ENSMUST00000168878 Gm38119A0A0A6YX29 146 aa5.72□□□□□ -1.49
Shroom3-204ENSMUST00000168878 Dnah7cA0A087WR13 4024 aa5.7□□□□□ -1.5
Shroom3-204ENSMUST00000168878 Fat2Q5F226 4351 aa5.7□□□□□ -1.5
Shroom3-204ENSMUST00000168878 Kiaa1109A2AAE1 5005 aa5.68□□□□□ -1.5
Shroom3-204ENSMUST00000168878 Vps13bQ80TY5 3993 aa5.67□□□□□ -1.5
Shroom3-204ENSMUST00000168878 HydinQ80W93 5154 aa5.66□□□□□ -1.5
Shroom3-204ENSMUST00000168878 Gm9789Q8BIG3 52 aa5.66□□□□□ -1.5
Shroom3-204ENSMUST00000168878 Krtap9-3Q3V2C1 136 aa5.65□□□□□ -1.51
Shroom3-204ENSMUST00000168878 Lrp2A2ARV4 4660 aa5.64□□□□□ -1.51
Shroom3-204ENSMUST00000168878 Lce1gQ9D195 139 aa5.63□□□□□ -1.51
Shroom3-204ENSMUST00000168878 Lce1iQ9D6P5 149 aa5.63□□□□□ -1.51
Shroom3-204ENSMUST00000168878 Lce1hQ9D6R3 140 aa5.63□□□□□ -1.51
Shroom3-204ENSMUST00000168878 Gm10024A0A0A0MQA4 119 aa5.6□□□□□ -1.51
Shroom3-204ENSMUST00000168878 Krtap19-4Q925H7 84 aa5.59□□□□□ -1.51
Shroom3-204ENSMUST00000168878 Lce1fB9EJP6 147 aa5.57□□□□□ -1.52
Shroom3-204ENSMUST00000168878 Lce1cQ9D1C5 147 aa5.57□□□□□ -1.52
Shroom3-204ENSMUST00000168878 Lce1lQ9D1G7 135 aa5.57□□□□□ -1.52
Shroom3-204ENSMUST00000168878 Lce1dQ9D731 133 aa5.57□□□□□ -1.52
Shroom3-204ENSMUST00000168878 Kmt2cQ8BRH4 4903 aa5.53□□□□□ -1.52
Shroom3-204ENSMUST00000168878 PcloQ9QYX7 5068 aa5.51□□□□□ -1.53
Shroom3-204ENSMUST00000168878 Lce1bQ9D149 137 aa5.51□□□□□ -1.53
Shroom3-204ENSMUST00000168878 Lce1eQ9D139 143 aa5.49□□□□□ -1.53
Shroom3-204ENSMUST00000168878 Gm10061D3Z714 54 aa5.47□□□□□ -1.53
Shroom3-204ENSMUST00000168878 Sprr2eO70556 76 aa5.43□□□□□ -1.54
Shroom3-204ENSMUST00000168878 Gm11569B1AQB1 180 aa5.4□□□□□ -1.54
Shroom3-204ENSMUST00000168878 Pkhd1E9PZ36 4059 aa5.32□□□□□ -1.56
Shroom3-204ENSMUST00000168878 Birc6O88738 4882 aa5.31□□□□□ -1.56
Shroom3-204ENSMUST00000168878 Pkhd1l1Q80ZA4 4249 aa5.27□□□□□ -1.57
Shroom3-204ENSMUST00000168878 Lce1a2Q9D1K4 149 aa5.27□□□□□ -1.57
Shroom3-204ENSMUST00000168878 Sprr2fO70557 76 aa5.24□□□□□ -1.57
Shroom3-204ENSMUST00000168878 Krtap4-2B1AQ85 167 aa5.17□□□□□ -1.58
Shroom3-204ENSMUST00000168878 Sprr2dO70555 85 aa5.13□□□□□ -1.59
Shroom3-204ENSMUST00000168878 Mt4P47945 62 aa5.13□□□□□ -1.59
Shroom3-204ENSMUST00000168878 Sprr2hO70559 108 aa5.12□□□□□ -1.59
Shroom3-204ENSMUST00000168878 Syne1Q6ZWR6 8799 aa5.12□□□□□ -1.59
Shroom3-204ENSMUST00000168878 Mdn1A2ANY6 5589 aaKnown RBP5.1□□□□□ -1.59
Shroom3-204ENSMUST00000168878 Krtap31-1Q9D644 177 aa5.08□□□□□ -1.6
Shroom3-204ENSMUST00000168878 Krtap4-6Q3V4B7 195 aa5.08□□□□□ -1.6
Shroom3-204ENSMUST00000168878 Abca13Q5SSE9 5034 aa5.02□□□□□ -1.61
Shroom3-204ENSMUST00000168878 Ubr4A2AN08 5180 aa5.02□□□□□ -1.61
Shroom3-204ENSMUST00000168878 Gm11938Q9D3H4 131 aa5.01□□□□□ -1.61
Shroom3-204ENSMUST00000168878 4932415D10RikA0A1W2P6U8 4986 aa4.98□□□□□ -1.61
Retrieved 100 of 22,080 RNA–protein pairs in 53.6 ms