RNA–Protein interactions for RNA: ENSMUST00000165860.7

Ubr4-212, Transcript of E3 ubiquitin-protein ligase UBR4, mousemouse

TSL 5 BASIC

Gene Ubr4, Length 15,798 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4-212ENSMUST00000165860 Dnah17Q69Z23 4481 aa2.61□□□□□ -1.99
Ubr4-212ENSMUST00000165860 Krtap19-5O08632 62 aa2.61□□□□□ -1.99
Ubr4-212ENSMUST00000165860 PlecQ9QXS1 4691 aaKnown RBP2.61□□□□□ -1.99
Ubr4-212ENSMUST00000165860 Gm18596A0A1W2P860 280 aa2.6□□□□□ -1.99
Ubr4-212ENSMUST00000165860 Vps13bQ80TY5 3993 aa2.6□□□□□ -1.99
Ubr4-212ENSMUST00000165860 Dnah2P0C6F1 4456 aa2.59□□□□□ -1.99
Ubr4-212ENSMUST00000165860 2310046K23RikA0A0A6YVW6 87 aa2.59□□□□□ -2
Ubr4-212ENSMUST00000165860 Hectd4E9Q2E4 4418 aa2.58□□□□□ -2
Ubr4-212ENSMUST00000165860 Hspg2Q05793 3707 aaKnown RBP2.57□□□□□ -2
Ubr4-212ENSMUST00000165860 Dnah11E9Q7N9 4488 aa2.57□□□□□ -2
Ubr4-212ENSMUST00000165860 Dync2h1Q45VK7 4306 aa2.56□□□□□ -2
Ubr4-212ENSMUST00000165860 Kmt2aP55200 3966 aa2.55□□□□□ -2
Ubr4-212ENSMUST00000165860 Pkhd1E9PZ36 4059 aa2.54□□□□□ -2
Ubr4-212ENSMUST00000165860 Krtap1-5A2A590 122 aa2.53□□□□□ -2
Ubr4-212ENSMUST00000165860 Krtap8-1O08633 61 aa2.52□□□□□ -2.01
Ubr4-212ENSMUST00000165860 Dnah8Q91XQ0 4731 aa2.51□□□□□ -2.01
Ubr4-212ENSMUST00000165860 Dync1h1Q9JHU4 4644 aaKnown RBP2.51□□□□□ -2.01
Ubr4-212ENSMUST00000165860 SacsQ9JLC8 4582 aa2.49□□□□□ -2.01
Ubr4-212ENSMUST00000165860 Sprr2gO70558 76 aa2.48□□□□□ -2.01
Ubr4-212ENSMUST00000165860 ApobE9Q414 4505 aa2.47□□□□□ -2.01
Ubr4-212ENSMUST00000165860 Mycbp2Q7TPH6 4711 aa2.46□□□□□ -2.01
Ubr4-212ENSMUST00000165860 Dnah9B1AR51 4484 aa2.46□□□□□ -2.02
Ubr4-212ENSMUST00000165860 Dnah5Q8VHE6 4621 aa2.45□□□□□ -2.02
Ubr4-212ENSMUST00000165860 Stard9Q80TF6 4561 aa2.45□□□□□ -2.02
Ubr4-212ENSMUST00000165860 Krtap19-9bQ99NG9 58 aa2.44□□□□□ -2.02
Ubr4-212ENSMUST00000165860 Fat1A0A1L1SQU7 4645 aa2.44□□□□□ -2.02
Ubr4-212ENSMUST00000165860 Krtap19-9aF8WH65 55 aa2.41□□□□□ -2.02
Ubr4-212ENSMUST00000165860 Krtap12-1Q9Z287 130 aa2.41□□□□□ -2.02
Ubr4-212ENSMUST00000165860 Krtap1-4Q3V2D6 188 aa2.41□□□□□ -2.02
Ubr4-212ENSMUST00000165860 Pkhd1l1Q80ZA4 4249 aa2.41□□□□□ -2.02
Ubr4-212ENSMUST00000165860 Pkd1O08852 4293 aa2.4□□□□□ -2.02
Ubr4-212ENSMUST00000165860 Lrp1Q91ZX7 4545 aaKnown RBP2.4□□□□□ -2.03
Ubr4-212ENSMUST00000165860 Fat3Q8BNA6 4555 aa2.38□□□□□ -2.03
Ubr4-212ENSMUST00000165860 Gm10272F7CZ33 110 aa2.32□□□□□ -2.04
Ubr4-212ENSMUST00000165860 LorP18165 486 aa2.32□□□□□ -2.04
Ubr4-212ENSMUST00000165860 Lrp1bQ9JI18 4599 aa2.32□□□□□ -2.04
Ubr4-212ENSMUST00000165860 Lce3bQ9CQM7 98 aa2.31□□□□□ -2.04
Ubr4-212ENSMUST00000165860 Dnhd1D3Z2X2 4750 aa2.27□□□□□ -2.05
Ubr4-212ENSMUST00000165860 Lce3cQ91V05 98 aa2.26□□□□□ -2.05
Ubr4-212ENSMUST00000165860 Ryr2E9Q401 4966 aaKnown RBP2.25□□□□□ -2.05
Ubr4-212ENSMUST00000165860 Fat2Q5F226 4351 aa2.25□□□□□ -2.05
Ubr4-212ENSMUST00000165860 Gm10100J3QK64 120 aa2.24□□□□□ -2.05
Ubr4-212ENSMUST00000165860 Birc6O88738 4882 aa2.21□□□□□ -2.06
Ubr4-212ENSMUST00000165860 Krtap31-1Q9D644 177 aa2.2□□□□□ -2.06
Ubr4-212ENSMUST00000165860 Sprr2iO70560 76 aa2.2□□□□□ -2.06
Ubr4-212ENSMUST00000165860 Sprr2fO70557 76 aa2.19□□□□□ -2.06
Ubr4-212ENSMUST00000165860 Lce3eF8VQJ0 98 aa2.19□□□□□ -2.06
Ubr4-212ENSMUST00000165860 Lce3fQ6PAI4 98 aa2.19□□□□□ -2.06
Ubr4-212ENSMUST00000165860 ZanO88799 5376 aa2.18□□□□□ -2.06
Ubr4-212ENSMUST00000165860 Gm10142J3KMP7 120 aa2.18□□□□□ -2.06
Ubr4-212ENSMUST00000165860 Krtap16-3Q8C1I6 86 aa2.18□□□□□ -2.06
Ubr4-212ENSMUST00000165860 Lce3dE9Q8V1 98 aa2.17□□□□□ -2.06
Ubr4-212ENSMUST00000165860 Lce1jD3YUU5 139 aa2.17□□□□□ -2.06
Ubr4-212ENSMUST00000165860 Lce1gQ9D195 139 aa2.17□□□□□ -2.06
Ubr4-212ENSMUST00000165860 Lce1iQ9D6P5 149 aa2.17□□□□□ -2.06
Ubr4-212ENSMUST00000165860 Lce1hQ9D6R3 140 aa2.17□□□□□ -2.06
Ubr4-212ENSMUST00000165860 Mdn1A2ANY6 5589 aaKnown RBP2.17□□□□□ -2.06
Ubr4-212ENSMUST00000165860 Krtap9-3Q3V2C1 136 aa2.16□□□□□ -2.06
Ubr4-212ENSMUST00000165860 Gm38119A0A0A6YX29 146 aa2.15□□□□□ -2.06
Ubr4-212ENSMUST00000165860 Lrp2A2ARV4 4660 aa2.15□□□□□ -2.06
Ubr4-212ENSMUST00000165860 Herc2Q4U2R1 4836 aa2.14□□□□□ -2.07
Ubr4-212ENSMUST00000165860 Lce3aQ497I5 98 aa2.12□□□□□ -2.07
Ubr4-212ENSMUST00000165860 PcloQ9QYX7 5068 aa2.12□□□□□ -2.07
Ubr4-212ENSMUST00000165860 Krtap19-3Q925H6 87 aa2.12□□□□□ -2.07
Ubr4-212ENSMUST00000165860 Krtap1-3A2A588 173 aa2.12□□□□□ -2.07
Ubr4-212ENSMUST00000165860 Lce1mQ9CR91 182 aa2.12□□□□□ -2.07
Ubr4-212ENSMUST00000165860 Ryr3A2AGL3 4863 aa2.11□□□□□ -2.07
Ubr4-212ENSMUST00000165860 HydinQ80W93 5154 aa2.11□□□□□ -2.07
Ubr4-212ENSMUST00000165860 Sprr2eO70556 76 aa2.09□□□□□ -2.07
Ubr4-212ENSMUST00000165860 Krtap31-2Q8CAY5 177 aa2.09□□□□□ -2.08
Ubr4-212ENSMUST00000165860 Krtap19-1Q925H2 87 aa2.09□□□□□ -2.08
Ubr4-212ENSMUST00000165860 Mt3P28184 68 aa2.08□□□□□ -2.08
Ubr4-212ENSMUST00000165860 Gm10024A0A0A0MQA4 119 aa2.08□□□□□ -2.08
Ubr4-212ENSMUST00000165860 Krtap19-4Q925H7 84 aa2.08□□□□□ -2.08
Ubr4-212ENSMUST00000165860 Sprr2hO70559 108 aa2.08□□□□□ -2.08
Ubr4-212ENSMUST00000165860 Krtap9-5A2A5X3 358 aa2.07□□□□□ -2.08
Ubr4-212ENSMUST00000165860 Sprr2dO70555 85 aa2.05□□□□□ -2.08
Ubr4-212ENSMUST00000165860 Herc1E9PZP8 4859 aa2.03□□□□□ -2.08
Ubr4-212ENSMUST00000165860 Krtap22-2J3QNX6 67 aa2.03□□□□□ -2.08
Ubr4-212ENSMUST00000165860 Kiaa1109A2AAE1 5005 aa2.02□□□□□ -2.09
Ubr4-212ENSMUST00000165860 Lce1bQ9D149 137 aa2.02□□□□□ -2.09
Ubr4-212ENSMUST00000165860 Lce1fB9EJP6 147 aa2.02□□□□□ -2.09
Ubr4-212ENSMUST00000165860 Lce1cQ9D1C5 147 aa2.02□□□□□ -2.09
Ubr4-212ENSMUST00000165860 Lce1lQ9D1G7 135 aa2.02□□□□□ -2.09
Ubr4-212ENSMUST00000165860 Lce1dQ9D731 133 aa2.02□□□□□ -2.09
Ubr4-212ENSMUST00000165860 Kmt2cQ8BRH4 4903 aa2.01□□□□□ -2.09
Ubr4-212ENSMUST00000165860 Ubr4A2AN08 5180 aa2□□□□□ -2.09
Ubr4-212ENSMUST00000165860 Lce1eQ9D139 143 aa1.99□□□□□ -2.09
Ubr4-212ENSMUST00000165860 Mt2P02798 61 aa1.99□□□□□ -2.09
Ubr4-212ENSMUST00000165860 Prm1P02319 51 aa1.98□□□□□ -2.09
Ubr4-212ENSMUST00000165860 Gm11938Q9D3H4 131 aa1.98□□□□□ -2.09
Ubr4-212ENSMUST00000165860 Krtap19-2Q925I0 141 aa1.95□□□□□ -2.1
Ubr4-212ENSMUST00000165860 Rnf213E9Q555 5152 aaKnown RBP1.93□□□□□ -2.1
Ubr4-212ENSMUST00000165860 Syne1Q6ZWR6 8799 aa1.92□□□□□ -2.1
Ubr4-212ENSMUST00000165860 Syne2Q6ZWQ0 6874 aaKnown RBP1.9□□□□□ -2.1
Ubr4-212ENSMUST00000165860 Gm11562A0PK51 136 aa1.9□□□□□ -2.11
Ubr4-212ENSMUST00000165860 Fsip2A2ARZ3 6995 aa1.87□□□□□ -2.11
Ubr4-212ENSMUST00000165860 Eppk1Q8R0W0 6548 aa1.87□□□□□ -2.11
Ubr4-212ENSMUST00000165860 Gpr98Q8VHN7 6298 aaKnown RBP1.87□□□□□ -2.11
Ubr4-212ENSMUST00000165860 Muc5bE9Q5I3 4800 aa1.86□□□□□ -2.11
Retrieved 100 of 22,080 RNA–protein pairs in 7.5 ms