RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Dnah9B1AR51 4484 aa6.95□□□□□ -1.3
Pcdh1-203ENSMUST00000160721 Mycbp2Q7TPH6 4711 aa6.93□□□□□ -1.3
Pcdh1-203ENSMUST00000160721 Gm6358A0A087WPH4 74 aa6.92□□□□□ -1.3
Pcdh1-203ENSMUST00000160721 ApobE9Q414 4505 aa6.91□□□□□ -1.3
Pcdh1-203ENSMUST00000160721 Krtap1-5A2A590 122 aa6.9□□□□□ -1.3
Pcdh1-203ENSMUST00000160721 Dnah7bL7N1Y0 4068 aa6.89□□□□□ -1.31
Pcdh1-203ENSMUST00000160721 Ryr3A2AGL3 4863 aa6.88□□□□□ -1.31
Pcdh1-203ENSMUST00000160721 SacsQ9JLC8 4582 aa6.86□□□□□ -1.31
Pcdh1-203ENSMUST00000160721 Krtap7-1Q9D3I6 87 aa6.85□□□□□ -1.31
Pcdh1-203ENSMUST00000160721 Krtap19-9aF8WH65 55 aa6.82□□□□□ -1.32
Pcdh1-203ENSMUST00000160721 Sprr2a3Q4KL71 83 aa6.82□□□□□ -1.32
Pcdh1-203ENSMUST00000160721 Sprr2a1Q9CQK8 83 aa6.82□□□□□ -1.32
Pcdh1-203ENSMUST00000160721 Krtap8-1O08633 61 aa6.81□□□□□ -1.32
Pcdh1-203ENSMUST00000160721 Kmt2aP55200 3966 aa6.8□□□□□ -1.32
Pcdh1-203ENSMUST00000160721 Sprr2kO70562 68 aa6.8□□□□□ -1.32
Pcdh1-203ENSMUST00000160721 Dnah6E9Q0B6 4144 aa6.79□□□□□ -1.32
Pcdh1-203ENSMUST00000160721 Krtap1-4Q3V2D6 188 aa6.78□□□□□ -1.32
Pcdh1-203ENSMUST00000160721 Dnah2P0C6F1 4456 aa6.73□□□□□ -1.33
Pcdh1-203ENSMUST00000160721 Lrp1bQ9JI18 4599 aa6.71□□□□□ -1.34
Pcdh1-203ENSMUST00000160721 Herc2Q4U2R1 4836 aa6.7□□□□□ -1.34
Pcdh1-203ENSMUST00000160721 Pkd1O08852 4293 aa6.66□□□□□ -1.34
Pcdh1-203ENSMUST00000160721 Krtap12-1Q9Z287 130 aa6.65□□□□□ -1.34
Pcdh1-203ENSMUST00000160721 Fat1A0A1L1SQU7 4645 aa6.64□□□□□ -1.35
Pcdh1-203ENSMUST00000160721 Kiaa1109A2AAE1 5005 aa6.63□□□□□ -1.35
Pcdh1-203ENSMUST00000160721 HydinQ80W93 5154 aa6.61□□□□□ -1.35
Pcdh1-203ENSMUST00000160721 Prm1P02319 51 aa6.6□□□□□ -1.35
Pcdh1-203ENSMUST00000160721 Dnah8Q91XQ0 4731 aa6.6□□□□□ -1.35
Pcdh1-203ENSMUST00000160721 Dnah1E9Q8T7 4250 aa6.6□□□□□ -1.35
Pcdh1-203ENSMUST00000160721 Fat3Q8BNA6 4555 aa6.57□□□□□ -1.36
Pcdh1-203ENSMUST00000160721 Dnah3Q8BW94 4083 aa6.54□□□□□ -1.36
Pcdh1-203ENSMUST00000160721 Krtap19-9bQ99NG9 58 aa6.53□□□□□ -1.36
Pcdh1-203ENSMUST00000160721 Lrp2A2ARV4 4660 aa6.52□□□□□ -1.37
Pcdh1-203ENSMUST00000160721 Lrp1Q91ZX7 4545 aaKnown RBP6.52□□□□□ -1.37
Pcdh1-203ENSMUST00000160721 Ryr2E9Q401 4966 aaKnown RBP6.49□□□□□ -1.37
Pcdh1-203ENSMUST00000160721 Krtap19-3Q925H6 87 aa6.47□□□□□ -1.37
Pcdh1-203ENSMUST00000160721 Krtap16-3Q8C1I6 86 aa6.46□□□□□ -1.38
Pcdh1-203ENSMUST00000160721 Gm7735D3YX18 52 aa6.43□□□□□ -1.38
Pcdh1-203ENSMUST00000160721 Krtap9-5A2A5X3 358 aa6.4□□□□□ -1.38
Pcdh1-203ENSMUST00000160721 Sprr2gO70558 76 aa6.39□□□□□ -1.39
Pcdh1-203ENSMUST00000160721 Fras1Q80T14 4010 aa6.39□□□□□ -1.39
Pcdh1-203ENSMUST00000160721 Hectd4E9Q2E4 4418 aa6.37□□□□□ -1.39
Pcdh1-203ENSMUST00000160721 Krtap19-1Q925H2 87 aa6.31□□□□□ -1.4
Pcdh1-203ENSMUST00000160721 Dnhd1D3Z2X2 4750 aa6.29□□□□□ -1.4
Pcdh1-203ENSMUST00000160721 Gm9789Q8BIG3 52 aa6.26□□□□□ -1.41
Pcdh1-203ENSMUST00000160721 Krtap1-3A2A588 173 aa6.22□□□□□ -1.41
Pcdh1-203ENSMUST00000160721 Dnah7cA0A087WR13 4024 aa6.2□□□□□ -1.42
Pcdh1-203ENSMUST00000160721 PcloQ9QYX7 5068 aa6.2□□□□□ -1.42
Pcdh1-203ENSMUST00000160721 Dnah7aE9Q0T8 4024 aa6.19□□□□□ -1.42
Pcdh1-203ENSMUST00000160721 Birc6O88738 4882 aa6.12□□□□□ -1.43
Pcdh1-203ENSMUST00000160721 Fat2Q5F226 4351 aa6.07□□□□□ -1.44
Pcdh1-203ENSMUST00000160721 Vps13bQ80TY5 3993 aa6.03□□□□□ -1.44
Pcdh1-203ENSMUST00000160721 Gm38119A0A0A6YX29 146 aa6.02□□□□□ -1.45
Pcdh1-203ENSMUST00000160721 Gm10061D3Z714 54 aa6.01□□□□□ -1.45
Pcdh1-203ENSMUST00000160721 Kmt2cQ8BRH4 4903 aa6□□□□□ -1.45
Pcdh1-203ENSMUST00000160721 Herc1E9PZP8 4859 aa6□□□□□ -1.45
Pcdh1-203ENSMUST00000160721 Krtap19-2Q925I0 141 aa6□□□□□ -1.45
Pcdh1-203ENSMUST00000160721 Mt2P02798 61 aa5.98□□□□□ -1.45
Pcdh1-203ENSMUST00000160721 Gm11569B1AQB1 180 aa5.98□□□□□ -1.45
Pcdh1-203ENSMUST00000160721 Lce3bQ9CQM7 98 aa5.97□□□□□ -1.45
Pcdh1-203ENSMUST00000160721 Gm10100J3QK64 120 aa5.94□□□□□ -1.46
Pcdh1-203ENSMUST00000160721 Krtap22-2J3QNX6 67 aa5.92□□□□□ -1.46
Pcdh1-203ENSMUST00000160721 2310046K23RikA0A0A6YVW6 87 aa5.92□□□□□ -1.46
Pcdh1-203ENSMUST00000160721 4932415D10RikA0A1W2P6U8 4986 aa5.92□□□□□ -1.46
Pcdh1-203ENSMUST00000160721 Pkhd1E9PZ36 4059 aa5.9□□□□□ -1.46
Pcdh1-203ENSMUST00000160721 Gm10272F7CZ33 110 aa5.9□□□□□ -1.46
Pcdh1-203ENSMUST00000160721 Abca13Q5SSE9 5034 aa5.9□□□□□ -1.47
Pcdh1-203ENSMUST00000160721 Mdn1A2ANY6 5589 aaKnown RBP5.89□□□□□ -1.47
Pcdh1-203ENSMUST00000160721 Lce3cQ91V05 98 aa5.88□□□□□ -1.47
Pcdh1-203ENSMUST00000160721 Lce1jD3YUU5 139 aa5.87□□□□□ -1.47
Pcdh1-203ENSMUST00000160721 Krtap4-2B1AQ85 167 aa5.83□□□□□ -1.48
Pcdh1-203ENSMUST00000160721 Gm10142J3KMP7 120 aa5.79□□□□□ -1.48
Pcdh1-203ENSMUST00000160721 Lce3eF8VQJ0 98 aa5.73□□□□□ -1.49
Pcdh1-203ENSMUST00000160721 Lce3fQ6PAI4 98 aa5.73□□□□□ -1.49
Pcdh1-203ENSMUST00000160721 Sprr2iO70560 76 aa5.69□□□□□ -1.5
Pcdh1-203ENSMUST00000160721 Krtap4-6Q3V4B7 195 aa5.67□□□□□ -1.5
Pcdh1-203ENSMUST00000160721 Lce1gQ9D195 139 aa5.65□□□□□ -1.51
Pcdh1-203ENSMUST00000160721 Mt4P47945 62 aa5.63□□□□□ -1.51
Pcdh1-203ENSMUST00000160721 Lce3dE9Q8V1 98 aa5.63□□□□□ -1.51
Pcdh1-203ENSMUST00000160721 Ubr4A2AN08 5180 aa5.62□□□□□ -1.51
Pcdh1-203ENSMUST00000160721 Fat4Q2PZL6 4981 aa5.61□□□□□ -1.51
Pcdh1-203ENSMUST00000160721 Lce3aQ497I5 98 aa5.57□□□□□ -1.52
Pcdh1-203ENSMUST00000160721 Pkhd1l1Q80ZA4 4249 aa5.55□□□□□ -1.52
Pcdh1-203ENSMUST00000160721 ZanO88799 5376 aa5.53□□□□□ -1.52
Pcdh1-203ENSMUST00000160721 Ush2AQ2QI47 5193 aa5.51□□□□□ -1.53
Pcdh1-203ENSMUST00000160721 Lce1bQ9D149 137 aa5.5□□□□□ -1.53
Pcdh1-203ENSMUST00000160721 Rnf213E9Q555 5152 aaKnown RBP5.47□□□□□ -1.53
Pcdh1-203ENSMUST00000160721 Lce1iQ9D6P5 149 aa5.46□□□□□ -1.53
Pcdh1-203ENSMUST00000160721 Lce1hQ9D6R3 140 aa5.46□□□□□ -1.53
Pcdh1-203ENSMUST00000160721 Lce1fB9EJP6 147 aa5.46□□□□□ -1.54
Pcdh1-203ENSMUST00000160721 Lce1cQ9D1C5 147 aa5.46□□□□□ -1.54
Pcdh1-203ENSMUST00000160721 Lce1lQ9D1G7 135 aa5.46□□□□□ -1.54
Pcdh1-203ENSMUST00000160721 Lce1dQ9D731 133 aa5.46□□□□□ -1.54
Pcdh1-203ENSMUST00000160721 Krtap4-1Q3UUY3 169 aa5.44□□□□□ -1.54
Pcdh1-203ENSMUST00000160721 Krtap9-3Q3V2C1 136 aa5.43□□□□□ -1.54
Pcdh1-203ENSMUST00000160721 Gm11596B1AQB0 205 aa5.43□□□□□ -1.54
Pcdh1-203ENSMUST00000160721 Gm10024A0A0A0MQA4 119 aa5.34□□□□□ -1.56
Pcdh1-203ENSMUST00000160721 Gm11564A2A4L9 201 aa5.33□□□□□ -1.56
Pcdh1-203ENSMUST00000160721 Gm11563B1AQ90 168 aa5.33□□□□□ -1.56
Pcdh1-203ENSMUST00000160721 Gm11595B1AQA7 289 aa5.33□□□□□ -1.56
Pcdh1-203ENSMUST00000160721 Krtap4-8B1AQA8 209 aa5.33□□□□□ -1.56
Retrieved 100 of 22,080 RNA–protein pairs in 76.5 ms