RNA–Protein interactions for RNA: ENSMUST00000159337.7

Vcan-205, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 2,273 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-205ENSMUST00000159337 Mycbp2Q7TPH6 4711 aa7.31□□□□□ -1.24
Vcan-205ENSMUST00000159337 Krtap28-13A0A087WQP5 138 aa7.31□□□□□ -1.24
Vcan-205ENSMUST00000159337 Gm9736A0A1W2P7N1 277 aa7.3□□□□□ -1.24
Vcan-205ENSMUST00000159337 Gm5965D3Z724 196 aa7.29□□□□□ -1.24
Vcan-205ENSMUST00000159337 Krtap19-5O08632 62 aa7.27□□□□□ -1.24
Vcan-205ENSMUST00000159337 Kmt2cQ8BRH4 4903 aa7.26□□□□□ -1.25
Vcan-205ENSMUST00000159337 2210017I01RikA0A0A6YVV1 95 aa7.25□□□□□ -1.25
Vcan-205ENSMUST00000159337 Gm11563B1AQ90 168 aa7.24□□□□□ -1.25
Vcan-205ENSMUST00000159337 Gm19426M0QWC7 77 aa7.24□□□□□ -1.25
Vcan-205ENSMUST00000159337 Krtap4-7Q9D732 168 aa7.24□□□□□ -1.25
Vcan-205ENSMUST00000159337 B930094E09RikQ8C4T2 136 aa7.22□□□□□ -1.25
Vcan-205ENSMUST00000159337 Dnah8Q91XQ0 4731 aa7.18□□□□□ -1.26
Vcan-205ENSMUST00000159337 Krtap7-1Q9D3I6 87 aa7.11□□□□□ -1.27
Vcan-205ENSMUST00000159337 A030005L19RikA0A1Y7VIU2 113 aa7.1□□□□□ -1.27
Vcan-205ENSMUST00000159337 Ndufaf8A2AMZ4 74 aa7.1□□□□□ -1.27
Vcan-205ENSMUST00000159337 A030005K14RikA0A1Y7VNY1 122 aa7.07□□□□□ -1.28
Vcan-205ENSMUST00000159337 Ryr2E9Q401 4966 aaKnown RBP7.07□□□□□ -1.28
Vcan-205ENSMUST00000159337 BC029722A0A0N4SW31 51 aa7.05□□□□□ -1.28
Vcan-205ENSMUST00000159337 Abca13Q5SSE9 5034 aa7.02□□□□□ -1.28
Vcan-205ENSMUST00000159337 Gm17402F6Z0L5 76 aa7.01□□□□□ -1.29
Vcan-205ENSMUST00000159337 Prm2P07978 107 aa6.97□□□□□ -1.29
Vcan-205ENSMUST00000159337 Krtap13-1Q8K198 168 aa6.97□□□□□ -1.29
Vcan-205ENSMUST00000159337 Gm40193A0A1B0GT39 78 aa6.96□□□□□ -1.3
Vcan-205ENSMUST00000159337 Fam229aB2KGE5 128 aa6.9□□□□□ -1.31
Vcan-205ENSMUST00000159337 Ryr1E9PZQ0 5035 aa6.89□□□□□ -1.31
Vcan-205ENSMUST00000159337 Gm19402J3QJV4 266 aa6.89□□□□□ -1.31
Vcan-205ENSMUST00000159337 2310057N15RikQ9D6T8 200 aa6.86□□□□□ -1.31
Vcan-205ENSMUST00000159337 Gm7544A0A1Y7VJ58 118 aa6.83□□□□□ -1.32
Vcan-205ENSMUST00000159337 Krtap1-5A2A590 122 aa6.82□□□□□ -1.32
Vcan-205ENSMUST00000159337 Gm19668J3QMD1 248 aa6.8□□□□□ -1.32
Vcan-205ENSMUST00000159337 Sprr2a3Q4KL71 83 aa6.78□□□□□ -1.32
Vcan-205ENSMUST00000159337 Sprr2a1Q9CQK8 83 aa6.78□□□□□ -1.32
Vcan-205ENSMUST00000159337 Dnhd1D3Z2X2 4750 aa6.73□□□□□ -1.33
Vcan-205ENSMUST00000159337 Lrp2A2ARV4 4660 aa6.69□□□□□ -1.34
Vcan-205ENSMUST00000159337 Sec61bQ9CQS8 96 aaKnown RBP6.64□□□□□ -1.35
Vcan-205ENSMUST00000159337 Spink7Q6IE32 76 aa6.6□□□□□ -1.35
Vcan-205ENSMUST00000159337 Kiaa1109A2AAE1 5005 aa6.6□□□□□ -1.35
Vcan-205ENSMUST00000159337 Herc2Q4U2R1 4836 aa6.55□□□□□ -1.36
Vcan-205ENSMUST00000159337 HydinQ80W93 5154 aa6.53□□□□□ -1.36
Vcan-205ENSMUST00000159337 Birc6O88738 4882 aa6.51□□□□□ -1.37
Vcan-205ENSMUST00000159337 Gm9112A2AI92 75 aa6.5□□□□□ -1.37
Vcan-205ENSMUST00000159337 Krtap16-3Q8C1I6 86 aa6.48□□□□□ -1.37
Vcan-205ENSMUST00000159337 Camk2n1Q6QWF9 78 aa6.46□□□□□ -1.37
Vcan-205ENSMUST00000159337 Krtap4-2B1AQ85 167 aa6.43□□□□□ -1.38
Vcan-205ENSMUST00000159337 Gm10318A0A1W2P728 225 aa6.38□□□□□ -1.39
Vcan-205ENSMUST00000159337 A0A1Y7VJ07 166 aa6.38□□□□□ -1.39
Vcan-205ENSMUST00000159337 Krtap19-1Q925H2 87 aa6.38□□□□□ -1.39
Vcan-205ENSMUST00000159337 Crct1Q6PAI5 102 aa6.35□□□□□ -1.39
Vcan-205ENSMUST00000159337 Krtap1-4Q3V2D6 188 aa6.34□□□□□ -1.39
Vcan-205ENSMUST00000159337 Lce1mQ9CR91 182 aa6.32□□□□□ -1.4
Vcan-205ENSMUST00000159337 Krtap19-3Q925H6 87 aa6.3□□□□□ -1.4
Vcan-205ENSMUST00000159337 Herc1E9PZP8 4859 aa6.29□□□□□ -1.4
Vcan-205ENSMUST00000159337 Tnp1P10856 55 aa6.22□□□□□ -1.41
Vcan-205ENSMUST00000159337 PcloQ9QYX7 5068 aa6.11□□□□□ -1.43
Vcan-205ENSMUST00000159337 A030003K21RikA0A1Y7VIM3 128 aa6.09□□□□□ -1.44
Vcan-205ENSMUST00000159337 A030014E15RikA0A1Y7VJV2 120 aa6.07□□□□□ -1.44
Vcan-205ENSMUST00000159337 Lce1jD3YUU5 139 aa6.04□□□□□ -1.44
Vcan-205ENSMUST00000159337 4932415D10RikA0A1W2P6U8 4986 aa6.03□□□□□ -1.44
Vcan-205ENSMUST00000159337 Hmcn2A2AJ76 5100 aa6.02□□□□□ -1.45
Vcan-205ENSMUST00000159337 Krtap19-9aF8WH65 55 aa5.99□□□□□ -1.45
Vcan-205ENSMUST00000159337 ZanO88799 5376 aa5.99□□□□□ -1.45
Vcan-205ENSMUST00000159337 Krtap12-1Q9Z287 130 aa5.97□□□□□ -1.45
Vcan-205ENSMUST00000159337 2310046K23RikA0A0A6YVW6 87 aa5.96□□□□□ -1.45
Vcan-205ENSMUST00000159337 Ubr4A2AN08 5180 aa5.93□□□□□ -1.46
Vcan-205ENSMUST00000159337 Krtap8-1O08633 61 aa5.91□□□□□ -1.46
Vcan-205ENSMUST00000159337 Fat4Q2PZL6 4981 aa5.9□□□□□ -1.46
Vcan-205ENSMUST00000159337 Krtap1-3A2A588 173 aa5.82□□□□□ -1.48
Vcan-205ENSMUST00000159337 Krtap19-9bQ99NG9 58 aa5.77□□□□□ -1.49
Vcan-205ENSMUST00000159337 Gm6217A0A1Y7VJK9 128 aa5.75□□□□□ -1.49
Vcan-205ENSMUST00000159337 Gm18596A0A1W2P860 280 aa5.71□□□□□ -1.5
Vcan-205ENSMUST00000159337 Ush2AQ2QI47 5193 aa5.7□□□□□ -1.5
Vcan-205ENSMUST00000159337 Rnf213E9Q555 5152 aaKnown RBP5.68□□□□□ -1.5
Vcan-205ENSMUST00000159337 LorP18165 486 aa5.68□□□□□ -1.5
Vcan-205ENSMUST00000159337 Lce1iQ9D6P5 149 aa5.68□□□□□ -1.5
Vcan-205ENSMUST00000159337 A0A286YCP9 139 aa5.67□□□□□ -1.5
Vcan-205ENSMUST00000159337 Krtap17-1A2A5X6 109 aa5.67□□□□□ -1.5
Vcan-205ENSMUST00000159337 Lce1a2Q9D1K4 149 aa5.65□□□□□ -1.5
Vcan-205ENSMUST00000159337 Krtap9-3Q3V2C1 136 aa5.63□□□□□ -1.51
Vcan-205ENSMUST00000159337 Lce1hQ9D6R3 140 aa5.58□□□□□ -1.52
Vcan-205ENSMUST00000159337 Prm1P02319 51 aa5.53□□□□□ -1.52
Vcan-205ENSMUST00000159337 Krtap19-2Q925I0 141 aa5.53□□□□□ -1.52
Vcan-205ENSMUST00000159337 Gm9789Q8BIG3 52 aa5.49□□□□□ -1.53
Vcan-205ENSMUST00000159337 Gm7735D3YX18 52 aa5.48□□□□□ -1.53
Vcan-205ENSMUST00000159337 SspoQ8CG65 4998 aa5.47□□□□□ -1.53
Vcan-205ENSMUST00000159337 Krtap9-5A2A5X3 358 aa5.46□□□□□ -1.54
Vcan-205ENSMUST00000159337 Lce1dQ9D731 133 aa5.41□□□□□ -1.54
Vcan-205ENSMUST00000159337 Krtap31-2Q8CAY5 177 aa5.37□□□□□ -1.55
Vcan-205ENSMUST00000159337 Gm38119A0A0A6YX29 146 aa5.32□□□□□ -1.56
Vcan-205ENSMUST00000159337 Sprr2gO70558 76 aa5.31□□□□□ -1.56
Vcan-205ENSMUST00000159337 4933428G20RikQ9D3X4 101 aa5.25□□□□□ -1.57
Vcan-205ENSMUST00000159337 Mt2P02798 61 aa5.22□□□□□ -1.57
Vcan-205ENSMUST00000159337 Lce1eQ9D139 143 aa5.21□□□□□ -1.58
Vcan-205ENSMUST00000159337 Gm11938Q9D3H4 131 aa5.21□□□□□ -1.58
Vcan-205ENSMUST00000159337 Sprr2dO70555 85 aa5.19□□□□□ -1.58
Vcan-205ENSMUST00000159337 Muc5bE9Q5I3 4800 aa5.18□□□□□ -1.58
Vcan-205ENSMUST00000159337 Gm6358A0A087WPH4 74 aa5.14□□□□□ -1.59
Vcan-205ENSMUST00000159337 Krtap31-1Q9D644 177 aa5.14□□□□□ -1.59
Vcan-205ENSMUST00000159337 Lce1a1Q9CQH5 143 aa5.12□□□□□ -1.59
Vcan-205ENSMUST00000159337 Lce1gQ9D195 139 aa5.12□□□□□ -1.59
Vcan-205ENSMUST00000159337 Gm11562A0PK51 136 aa4.99□□□□□ -1.61
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms