RNA–Protein interactions for RNA: ENSMUST00000141135.4

Abca4-207, Transcript of Retinal-specific ATP-binding cassette transporter, mousemouse

TSL 1 (best) BASIC

Gene Abca4, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4-207ENSMUST00000141135 Camk2n1Q6QWF9 78 aa3.69□□□□□ -1.82
Abca4-207ENSMUST00000141135 Defb1P56386 69 aa3.68□□□□□ -1.82
Abca4-207ENSMUST00000141135 Krtap4-2B1AQ85 167 aa3.68□□□□□ -1.82
Abca4-207ENSMUST00000141135 Defb13Q8R2I4 64 aa3.68□□□□□ -1.82
Abca4-207ENSMUST00000141135 Anapc11Q9CPX9 84 aa3.67□□□□□ -1.82
Abca4-207ENSMUST00000141135 Krtap3-1A2A591 98 aa3.66□□□□□ -1.82
Abca4-207ENSMUST00000141135 Gm10642Q3TWM1 71 aa3.65□□□□□ -1.82
Abca4-207ENSMUST00000141135 Gm4491E0CX42 125 aa3.64□□□□□ -1.83
Abca4-207ENSMUST00000141135 Kiaa1109A2AAE1 5005 aa3.64□□□□□ -1.83
Abca4-207ENSMUST00000141135 Gm10999F6Q4M4 69 aa3.64□□□□□ -1.83
Abca4-207ENSMUST00000141135 Krtap31-1Q9D644 177 aa3.63□□□□□ -1.83
Abca4-207ENSMUST00000141135 HydinQ80W93 5154 aa3.62□□□□□ -1.83
Abca4-207ENSMUST00000141135 Fam229aB2KGE5 128 aa3.6□□□□□ -1.83
Abca4-207ENSMUST00000141135 A930033H14RikG5E8X6 103 aa3.58□□□□□ -1.84
Abca4-207ENSMUST00000141135 Herc1E9PZP8 4859 aa3.56□□□□□ -1.84
Abca4-207ENSMUST00000141135 D6Ertd527eA0A0N4SWI3 464 aa3.53□□□□□ -1.84
Abca4-207ENSMUST00000141135 Prm1P02319 51 aa3.53□□□□□ -1.84
Abca4-207ENSMUST00000141135 Krtap19-5O08632 62 aa3.52□□□□□ -1.85
Abca4-207ENSMUST00000141135 4930507D05RikQ8C9C9 103 aa3.51□□□□□ -1.85
Abca4-207ENSMUST00000141135 Lrp1Q91ZX7 4545 aaKnown RBP3.51□□□□□ -1.85
Abca4-207ENSMUST00000141135 Hmcn2A2AJ76 5100 aa3.5□□□□□ -1.85
Abca4-207ENSMUST00000141135 Gm9789Q8BIG3 52 aa3.5□□□□□ -1.85
Abca4-207ENSMUST00000141135 Gm20537G3UYK7 97 aa3.5□□□□□ -1.85
Abca4-207ENSMUST00000141135 Spaca4Q80ZQ0 127 aa3.49□□□□□ -1.85
Abca4-207ENSMUST00000141135 Gm7735D3YX18 52 aa3.49□□□□□ -1.85
Abca4-207ENSMUST00000141135 Gm10382Q3V0T5 144 aa3.48□□□□□ -1.85
Abca4-207ENSMUST00000141135 Lce1jD3YUU5 139 aa3.48□□□□□ -1.85
Abca4-207ENSMUST00000141135 2310079G19RikQ9D6L6 185 aa3.47□□□□□ -1.85
Abca4-207ENSMUST00000141135 Ush2AQ2QI47 5193 aa3.46□□□□□ -1.86
Abca4-207ENSMUST00000141135 Gm17606F6ZL36 78 aa3.45□□□□□ -1.86
Abca4-207ENSMUST00000141135 Gm9736A0A1W2P7N1 277 aa3.4□□□□□ -1.87
Abca4-207ENSMUST00000141135 Gm9955Q8CEJ8 102 aa3.39□□□□□ -1.87
Abca4-207ENSMUST00000141135 Gm5767A0A0J9YTU8 78 aa3.39□□□□□ -1.87
Abca4-207ENSMUST00000141135 Rpl37Q9D823 97 aa3.39□□□□□ -1.87
Abca4-207ENSMUST00000141135 Gm17416Q30KP4 66 aa3.38□□□□□ -1.87
Abca4-207ENSMUST00000141135 Gm19402J3QJV4 266 aa3.37□□□□□ -1.87
Abca4-207ENSMUST00000141135 Cox6b2Q80ZN9 88 aa3.36□□□□□ -1.87
Abca4-207ENSMUST00000141135 4932415D10RikA0A1W2P6U8 4986 aa3.35□□□□□ -1.87
Abca4-207ENSMUST00000141135 Lrp2A2ARV4 4660 aa3.35□□□□□ -1.87
Abca4-207ENSMUST00000141135 Lce1hQ9D6R3 140 aa3.33□□□□□ -1.88
Abca4-207ENSMUST00000141135 Ubr4A2AN08 5180 aa3.33□□□□□ -1.88
Abca4-207ENSMUST00000141135 B930094E09RikQ8C4T2 136 aa3.31□□□□□ -1.88
Abca4-207ENSMUST00000141135 Lce1bQ9D149 137 aa3.3□□□□□ -1.88
Abca4-207ENSMUST00000141135 Rnf213E9Q555 5152 aaKnown RBP3.27□□□□□ -1.89
Abca4-207ENSMUST00000141135 Gm10318A0A1W2P728 225 aa3.25□□□□□ -1.89
Abca4-207ENSMUST00000141135 LorP18165 486 aa3.25□□□□□ -1.89
Abca4-207ENSMUST00000141135 Crct1Q6PAI5 102 aa3.21□□□□□ -1.9
Abca4-207ENSMUST00000141135 Gm40193A0A1B0GT39 78 aa3.2□□□□□ -1.9
Abca4-207ENSMUST00000141135 ZanO88799 5376 aa3.2□□□□□ -1.9
Abca4-207ENSMUST00000141135 Gm19426M0QWC7 77 aa3.19□□□□□ -1.9
Abca4-207ENSMUST00000141135 Fat4Q2PZL6 4981 aa3.18□□□□□ -1.9
Abca4-207ENSMUST00000141135 Krtap1-3A2A588 173 aa3.18□□□□□ -1.9
Abca4-207ENSMUST00000141135 Krtap1-5A2A590 122 aa3.16□□□□□ -1.9
Abca4-207ENSMUST00000141135 Gm19668J3QMD1 248 aa3.15□□□□□ -1.9
Abca4-207ENSMUST00000141135 Krtap7-1Q9D3I6 87 aa3.15□□□□□ -1.9
Abca4-207ENSMUST00000141135 SspoQ8CG65 4998 aa3.12□□□□□ -1.91
Abca4-207ENSMUST00000141135 Muc5bE9Q5I3 4800 aa3.12□□□□□ -1.91
Abca4-207ENSMUST00000141135 Lce1eQ9D139 143 aa3.11□□□□□ -1.91
Abca4-207ENSMUST00000141135 Gm17402F6Z0L5 76 aa3.11□□□□□ -1.91
Abca4-207ENSMUST00000141135 Krtap19-1Q925H2 87 aa3.06□□□□□ -1.92
Abca4-207ENSMUST00000141135 Krtap16-3Q8C1I6 86 aa3.05□□□□□ -1.92
Abca4-207ENSMUST00000141135 Krtap1-4Q3V2D6 188 aa3.05□□□□□ -1.92
Abca4-207ENSMUST00000141135 Krtap13-1Q8K198 168 aa3.05□□□□□ -1.92
Abca4-207ENSMUST00000141135 Gm38119A0A0A6YX29 146 aa3.03□□□□□ -1.92
Abca4-207ENSMUST00000141135 Lce1gQ9D195 139 aa3□□□□□ -1.93
Abca4-207ENSMUST00000141135 Krtap19-3Q925H6 87 aa3□□□□□ -1.93
Abca4-207ENSMUST00000141135 Gm10061D3Z714 54 aa2.99□□□□□ -1.93
Abca4-207ENSMUST00000141135 Gm11559Q9D3H7 191 aa2.97□□□□□ -1.93
Abca4-207ENSMUST00000141135 Sprr2a3Q4KL71 83 aa2.94□□□□□ -1.94
Abca4-207ENSMUST00000141135 Sprr2a1Q9CQK8 83 aa2.94□□□□□ -1.94
Abca4-207ENSMUST00000141135 Mdn1A2ANY6 5589 aaKnown RBP2.94□□□□□ -1.94
Abca4-207ENSMUST00000141135 BC029722A0A0N4SW31 51 aa2.93□□□□□ -1.94
Abca4-207ENSMUST00000141135 Spink7Q6IE32 76 aa2.91□□□□□ -1.94
Abca4-207ENSMUST00000141135 Gm11569B1AQB1 180 aa2.89□□□□□ -1.95
Abca4-207ENSMUST00000141135 Syne2Q6ZWQ0 6874 aaKnown RBP2.88□□□□□ -1.95
Abca4-207ENSMUST00000141135 4933428G20RikQ9D3X4 101 aa2.86□□□□□ -1.95
Abca4-207ENSMUST00000141135 Gm11596B1AQB0 205 aa2.81□□□□□ -1.96
Abca4-207ENSMUST00000141135 Tnp1P10856 55 aa2.78□□□□□ -1.96
Abca4-207ENSMUST00000141135 Krtap19-9aF8WH65 55 aa2.75□□□□□ -1.97
Abca4-207ENSMUST00000141135 Krtap12-1Q9Z287 130 aa2.75□□□□□ -1.97
Abca4-207ENSMUST00000141135 Sprr2kO70562 68 aa2.73□□□□□ -1.97
Abca4-207ENSMUST00000141135 Fsip2A2ARZ3 6995 aa2.72□□□□□ -1.97
Abca4-207ENSMUST00000141135 Eppk1Q8R0W0 6548 aa2.69□□□□□ -1.98
Abca4-207ENSMUST00000141135 Krtap6-3A0A087WQL6 57 aa2.66□□□□□ -1.98
Abca4-207ENSMUST00000141135 Krtap4-6Q3V4B7 195 aa2.66□□□□□ -1.98
Abca4-207ENSMUST00000141135 Krtap19-2Q925I0 141 aa2.65□□□□□ -1.99
Abca4-207ENSMUST00000141135 Krtap8-1O08633 61 aa2.64□□□□□ -1.99
Abca4-207ENSMUST00000141135 Lce1a1Q9CQH5 143 aa2.6□□□□□ -1.99
Abca4-207ENSMUST00000141135 Lce1iQ9D6P5 149 aa2.57□□□□□ -2
Abca4-207ENSMUST00000141135 Gm11564A2A4L9 201 aa2.57□□□□□ -2
Abca4-207ENSMUST00000141135 Krtap9-5A2A5X3 358 aa2.56□□□□□ -2
Abca4-207ENSMUST00000141135 Krtap19-9bQ99NG9 58 aa2.54□□□□□ -2
Abca4-207ENSMUST00000141135 Macf1Q9QXZ0 7354 aaKnown RBP2.54□□□□□ -2
Abca4-207ENSMUST00000141135 Lce1a2Q9D1K4 149 aa2.54□□□□□ -2
Abca4-207ENSMUST00000141135 Gm6358A0A087WPH4 74 aa2.53□□□□□ -2
Abca4-207ENSMUST00000141135 Gm11595B1AQA7 289 aa2.53□□□□□ -2
Abca4-207ENSMUST00000141135 Krtap4-8B1AQA8 209 aa2.53□□□□□ -2
Abca4-207ENSMUST00000141135 Sprr2gO70558 76 aa2.53□□□□□ -2
Abca4-207ENSMUST00000141135 Mt4P47945 62 aa2.51□□□□□ -2.01
Abca4-207ENSMUST00000141135 2310046K23RikA0A0A6YVW6 87 aa2.5□□□□□ -2.01
Retrieved 100 of 22,080 RNA–protein pairs in 72.7 ms