RNA–Protein interactions for RNA: ENSMUST00000118976.8

Ccdc9-202, Transcript of Coiled-coil domain-containing protein 9, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc9, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9-202ENSMUST00000118976 2210017I01RikA0A0A6YVV1 95 aa12.67□□□□□ -0.38
Ccdc9-202ENSMUST00000118976 B930094E09RikQ8C4T2 136 aa12.65□□□□□ -0.38
Ccdc9-202ENSMUST00000118976 Mycbp2Q7TPH6 4711 aa12.57□□□□□ -0.4
Ccdc9-202ENSMUST00000118976 Ryr1E9PZQ0 5035 aa12.53□□□□□ -0.4
Ccdc9-202ENSMUST00000118976 Ndufaf8A2AMZ4 74 aa12.5□□□□□ -0.41
Ccdc9-202ENSMUST00000118976 Kmt2cQ8BRH4 4903 aa12.48□□□□□ -0.41
Ccdc9-202ENSMUST00000118976 Krtap7-1Q9D3I6 87 aa12.45□□□□□ -0.42
Ccdc9-202ENSMUST00000118976 Dnah8Q91XQ0 4731 aa12.41□□□□□ -0.42
Ccdc9-202ENSMUST00000118976 BC029722A0A0N4SW31 51 aa12.37□□□□□ -0.43
Ccdc9-202ENSMUST00000118976 Gm17402F6Z0L5 76 aa12.28□□□□□ -0.44
Ccdc9-202ENSMUST00000118976 Prm2P07978 107 aa12.27□□□□□ -0.45
Ccdc9-202ENSMUST00000118976 Krtap13-1Q8K198 168 aa12.19□□□□□ -0.46
Ccdc9-202ENSMUST00000118976 Gm40193A0A1B0GT39 78 aa12.19□□□□□ -0.46
Ccdc9-202ENSMUST00000118976 Fam229aB2KGE5 128 aa12.12□□□□□ -0.47
Ccdc9-202ENSMUST00000118976 Abca13Q5SSE9 5034 aa12.09□□□□□ -0.47
Ccdc9-202ENSMUST00000118976 Gm19402J3QJV4 266 aa12.06□□□□□ -0.48
Ccdc9-202ENSMUST00000118976 2310057N15RikQ9D6T8 200 aa12.04□□□□□ -0.48
Ccdc9-202ENSMUST00000118976 Dnhd1D3Z2X2 4750 aa11.99□□□□□ -0.49
Ccdc9-202ENSMUST00000118976 Gm19668J3QMD1 248 aa11.94□□□□□ -0.5
Ccdc9-202ENSMUST00000118976 Birc6O88738 4882 aa11.9□□□□□ -0.5
Ccdc9-202ENSMUST00000118976 Krtap1-5A2A590 122 aa11.9□□□□□ -0.5
Ccdc9-202ENSMUST00000118976 Herc2Q4U2R1 4836 aa11.88□□□□□ -0.51
Ccdc9-202ENSMUST00000118976 Kiaa1109A2AAE1 5005 aa11.86□□□□□ -0.51
Ccdc9-202ENSMUST00000118976 Sprr2a3Q4KL71 83 aa11.85□□□□□ -0.51
Ccdc9-202ENSMUST00000118976 Sprr2a1Q9CQK8 83 aa11.85□□□□□ -0.51
Ccdc9-202ENSMUST00000118976 Sec61bQ9CQS8 96 aaKnown RBP11.63□□□□□ -0.55
Ccdc9-202ENSMUST00000118976 Spink7Q6IE32 76 aa11.6□□□□□ -0.55
Ccdc9-202ENSMUST00000118976 HydinQ80W93 5154 aa11.56□□□□□ -0.56
Ccdc9-202ENSMUST00000118976 Lrp2A2ARV4 4660 aa11.49□□□□□ -0.57
Ccdc9-202ENSMUST00000118976 Gm9112A2AI92 75 aa11.43□□□□□ -0.58
Ccdc9-202ENSMUST00000118976 Camk2n1Q6QWF9 78 aa11.37□□□□□ -0.59
Ccdc9-202ENSMUST00000118976 Krtap16-3Q8C1I6 86 aa11.31□□□□□ -0.6
Ccdc9-202ENSMUST00000118976 PcloQ9QYX7 5068 aa11.22□□□□□ -0.61
Ccdc9-202ENSMUST00000118976 Gm10318A0A1W2P728 225 aa11.21□□□□□ -0.61
Ccdc9-202ENSMUST00000118976 Lce1mQ9CR91 182 aa11.18□□□□□ -0.62
Ccdc9-202ENSMUST00000118976 Crct1Q6PAI5 102 aa11.11□□□□□ -0.63
Ccdc9-202ENSMUST00000118976 Krtap19-1Q925H2 87 aa11.11□□□□□ -0.63
Ccdc9-202ENSMUST00000118976 Krtap1-4Q3V2D6 188 aa11.07□□□□□ -0.64
Ccdc9-202ENSMUST00000118976 Krtap19-3Q925H6 87 aa10.99□□□□□ -0.65
Ccdc9-202ENSMUST00000118976 Tnp1P10856 55 aa10.91□□□□□ -0.66
Ccdc9-202ENSMUST00000118976 Herc1E9PZP8 4859 aa10.85□□□□□ -0.67
Ccdc9-202ENSMUST00000118976 Gm18596A0A1W2P860 280 aa10.62□□□□□ -0.71
Ccdc9-202ENSMUST00000118976 Lce1jD3YUU5 139 aa10.56□□□□□ -0.72
Ccdc9-202ENSMUST00000118976 Ush2AQ2QI47 5193 aa10.55□□□□□ -0.72
Ccdc9-202ENSMUST00000118976 Gm9789Q8BIG3 52 aa10.55□□□□□ -0.72
Ccdc9-202ENSMUST00000118976 Prm1P02319 51 aa10.5□□□□□ -0.73
Ccdc9-202ENSMUST00000118976 Krtap1-3A2A588 173 aa10.47□□□□□ -0.73
Ccdc9-202ENSMUST00000118976 Krtap19-9aF8WH65 55 aa10.46□□□□□ -0.73
Ccdc9-202ENSMUST00000118976 Hmcn2A2AJ76 5100 aa10.46□□□□□ -0.74
Ccdc9-202ENSMUST00000118976 Krtap12-1Q9Z287 130 aa10.43□□□□□ -0.74
Ccdc9-202ENSMUST00000118976 2310046K23RikA0A0A6YVW6 87 aa10.4□□□□□ -0.74
Ccdc9-202ENSMUST00000118976 Gm7735D3YX18 52 aa10.4□□□□□ -0.74
Ccdc9-202ENSMUST00000118976 4932415D10RikA0A1W2P6U8 4986 aa10.35□□□□□ -0.75
Ccdc9-202ENSMUST00000118976 ZanO88799 5376 aa10.33□□□□□ -0.76
Ccdc9-202ENSMUST00000118976 Krtap8-1O08633 61 aa10.31□□□□□ -0.76
Ccdc9-202ENSMUST00000118976 Ubr4A2AN08 5180 aa10.25□□□□□ -0.77
Ccdc9-202ENSMUST00000118976 LorP18165 486 aa10.15□□□□□ -0.78
Ccdc9-202ENSMUST00000118976 Fat4Q2PZL6 4981 aa10.1□□□□□ -0.79
Ccdc9-202ENSMUST00000118976 Krtap19-9bQ99NG9 58 aa10.09□□□□□ -0.79
Ccdc9-202ENSMUST00000118976 Rnf213E9Q555 5152 aaKnown RBP10□□□□□ -0.81
Ccdc9-202ENSMUST00000118976 Krtap17-1A2A5X6 109 aa9.92□□□□□ -0.82
Ccdc9-202ENSMUST00000118976 Lce1iQ9D6P5 149 aa9.92□□□□□ -0.82
Ccdc9-202ENSMUST00000118976 Lce1a2Q9D1K4 149 aa9.87□□□□□ -0.83
Ccdc9-202ENSMUST00000118976 Krtap9-3Q3V2C1 136 aa9.86□□□□□ -0.83
Ccdc9-202ENSMUST00000118976 Lce1hQ9D6R3 140 aa9.75□□□□□ -0.85
Ccdc9-202ENSMUST00000118976 Krtap19-2Q925I0 141 aa9.64□□□□□ -0.87
Ccdc9-202ENSMUST00000118976 SspoQ8CG65 4998 aa9.61□□□□□ -0.87
Ccdc9-202ENSMUST00000118976 Krtap9-5A2A5X3 358 aa9.56□□□□□ -0.88
Ccdc9-202ENSMUST00000118976 Lce1dQ9D731 133 aa9.46□□□□□ -0.9
Ccdc9-202ENSMUST00000118976 Gm10061D3Z714 54 aa9.43□□□□□ -0.9
Ccdc9-202ENSMUST00000118976 Sprr2gO70558 76 aa9.26□□□□□ -0.93
Ccdc9-202ENSMUST00000118976 4933428G20RikQ9D3X4 101 aa9.23□□□□□ -0.93
Ccdc9-202ENSMUST00000118976 Lce1eQ9D139 143 aa9.12□□□□□ -0.95
Ccdc9-202ENSMUST00000118976 Mt2P02798 61 aa9.11□□□□□ -0.95
Ccdc9-202ENSMUST00000118976 Gm11938Q9D3H4 131 aa9.1□□□□□ -0.95
Ccdc9-202ENSMUST00000118976 Sprr2dO70555 85 aa9.05□□□□□ -0.96
Ccdc9-202ENSMUST00000118976 Gm6358A0A087WPH4 74 aa8.98□□□□□ -0.97
Ccdc9-202ENSMUST00000118976 Muc5bE9Q5I3 4800 aa8.95□□□□□ -0.98
Ccdc9-202ENSMUST00000118976 Gm11569B1AQB1 180 aa8.9□□□□□ -0.98
Ccdc9-202ENSMUST00000118976 Gm10272F7CZ33 110 aa8.71□□□□□ -1.02
Ccdc9-202ENSMUST00000118976 Lce1cQ9D1C5 147 aa8.56□□□□□ -1.04
Ccdc9-202ENSMUST00000118976 Gm11562A0PK51 136 aa8.52□□□□□ -1.04
Ccdc9-202ENSMUST00000118976 Krtap22-2J3QNX6 67 aa8.52□□□□□ -1.05
Ccdc9-202ENSMUST00000118976 Gm10100J3QK64 120 aa8.34□□□□□ -1.07
Ccdc9-202ENSMUST00000118976 Krtap19-4Q925H7 84 aa8.34□□□□□ -1.07
Ccdc9-202ENSMUST00000118976 Sprr2iO70560 76 aa8.27□□□□□ -1.09
Ccdc9-202ENSMUST00000118976 Lce1fB9EJP6 147 aa8.26□□□□□ -1.09
Ccdc9-202ENSMUST00000118976 Lce1a1Q9CQH5 143 aa8.26□□□□□ -1.09
Ccdc9-202ENSMUST00000118976 Lce3bQ9CQM7 98 aa8.24□□□□□ -1.09
Ccdc9-202ENSMUST00000118976 Gm10142J3KMP7 120 aa8.21□□□□□ -1.1
Ccdc9-202ENSMUST00000118976 Gm11555B1AQ89 175 aa8.16□□□□□ -1.1
Ccdc9-202ENSMUST00000118976 Mdn1A2ANY6 5589 aaKnown RBP8.14□□□□□ -1.11
Ccdc9-202ENSMUST00000118976 Lce1gQ9D195 139 aa8.1□□□□□ -1.11
Ccdc9-202ENSMUST00000118976 Krtap4-6Q3V4B7 195 aa8.08□□□□□ -1.12
Ccdc9-202ENSMUST00000118976 Krtap4-2B1AQ85 167 aa8.03□□□□□ -1.12
Ccdc9-202ENSMUST00000118976 Sprr2hO70559 108 aa7.95□□□□□ -1.14
Ccdc9-202ENSMUST00000118976 Lce3cQ91V05 98 aa7.94□□□□□ -1.14
Ccdc9-202ENSMUST00000118976 Krtap4-1Q3UUY3 169 aa7.93□□□□□ -1.14
Ccdc9-202ENSMUST00000118976 Lce3dE9Q8V1 98 aa7.91□□□□□ -1.14
Ccdc9-202ENSMUST00000118976 Sprr2eO70556 76 aa7.9□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms