RNA–Protein interactions for RNA: ENSMUST00000116522.7

Nck1-202, Transcript of Cytoplasmic protein NCK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nck1, Length 4,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1-202ENSMUST00000116522 Dnah6E9Q0B6 4144 aa6.62□□□□□ -1.35
Nck1-202ENSMUST00000116522 Gm19668J3QMD1 248 aa6.62□□□□□ -1.35
Nck1-202ENSMUST00000116522 Dnah1E9Q8T7 4250 aa6.57□□□□□ -1.36
Nck1-202ENSMUST00000116522 Mycbp2Q7TPH6 4711 aa6.56□□□□□ -1.36
Nck1-202ENSMUST00000116522 Dync1h1Q9JHU4 4644 aaKnown RBP6.54□□□□□ -1.36
Nck1-202ENSMUST00000116522 Hectd4E9Q2E4 4418 aa6.52□□□□□ -1.37
Nck1-202ENSMUST00000116522 Ryr3A2AGL3 4863 aa6.51□□□□□ -1.37
Nck1-202ENSMUST00000116522 Lrp1Q91ZX7 4545 aaKnown RBP6.5□□□□□ -1.37
Nck1-202ENSMUST00000116522 SacsQ9JLC8 4582 aa6.5□□□□□ -1.37
Nck1-202ENSMUST00000116522 Krtap1-5A2A590 122 aa6.44□□□□□ -1.38
Nck1-202ENSMUST00000116522 Fat3Q8BNA6 4555 aa6.41□□□□□ -1.38
Nck1-202ENSMUST00000116522 Dnah7cA0A087WR13 4024 aa6.4□□□□□ -1.38
Nck1-202ENSMUST00000116522 Gm19402J3QJV4 266 aa6.4□□□□□ -1.39
Nck1-202ENSMUST00000116522 Krtap7-1Q9D3I6 87 aa6.4□□□□□ -1.39
Nck1-202ENSMUST00000116522 Sprr2a3Q4KL71 83 aa6.38□□□□□ -1.39
Nck1-202ENSMUST00000116522 Sprr2a1Q9CQK8 83 aa6.38□□□□□ -1.39
Nck1-202ENSMUST00000116522 Vps13bQ80TY5 3993 aa6.35□□□□□ -1.39
Nck1-202ENSMUST00000116522 HydinQ80W93 5154 aa6.35□□□□□ -1.39
Nck1-202ENSMUST00000116522 Fat1A0A1L1SQU7 4645 aa6.33□□□□□ -1.4
Nck1-202ENSMUST00000116522 Dnah7aE9Q0T8 4024 aa6.3□□□□□ -1.4
Nck1-202ENSMUST00000116522 Fras1Q80T14 4010 aa6.29□□□□□ -1.4
Nck1-202ENSMUST00000116522 Kiaa1109A2AAE1 5005 aa6.25□□□□□ -1.41
Nck1-202ENSMUST00000116522 Krtap1-4Q3V2D6 188 aa6.24□□□□□ -1.41
Nck1-202ENSMUST00000116522 Lrp2A2ARV4 4660 aa6.2□□□□□ -1.42
Nck1-202ENSMUST00000116522 LorP18165 486 aa6.2□□□□□ -1.42
Nck1-202ENSMUST00000116522 Herc2Q4U2R1 4836 aa6.15□□□□□ -1.42
Nck1-202ENSMUST00000116522 Pkd1O08852 4293 aa6.14□□□□□ -1.43
Nck1-202ENSMUST00000116522 Krtap19-9aF8WH65 55 aa6.12□□□□□ -1.43
Nck1-202ENSMUST00000116522 Fat2Q5F226 4351 aa6.07□□□□□ -1.44
Nck1-202ENSMUST00000116522 Krtap16-3Q8C1I6 86 aa6.03□□□□□ -1.44
Nck1-202ENSMUST00000116522 Dnah8Q91XQ0 4731 aa6.03□□□□□ -1.44
Nck1-202ENSMUST00000116522 Krtap12-1Q9Z287 130 aa6.02□□□□□ -1.45
Nck1-202ENSMUST00000116522 Gm18596A0A1W2P860 280 aa6□□□□□ -1.45
Nck1-202ENSMUST00000116522 Krtap19-3Q925H6 87 aa5.96□□□□□ -1.46
Nck1-202ENSMUST00000116522 4933428G20RikQ9D3X4 101 aa5.95□□□□□ -1.46
Nck1-202ENSMUST00000116522 Ryr2E9Q401 4966 aaKnown RBP5.95□□□□□ -1.46
Nck1-202ENSMUST00000116522 Krtap19-1Q925H2 87 aa5.89□□□□□ -1.47
Nck1-202ENSMUST00000116522 Krtap19-9bQ99NG9 58 aa5.88□□□□□ -1.47
Nck1-202ENSMUST00000116522 Kmt2cQ8BRH4 4903 aa5.87□□□□□ -1.47
Nck1-202ENSMUST00000116522 Abca13Q5SSE9 5034 aa5.85□□□□□ -1.47
Nck1-202ENSMUST00000116522 Krtap4-1Q3UUY3 169 aa5.83□□□□□ -1.48
Nck1-202ENSMUST00000116522 Gm6358A0A087WPH4 74 aa5.81□□□□□ -1.48
Nck1-202ENSMUST00000116522 Lce1mQ9CR91 182 aa5.76□□□□□ -1.49
Nck1-202ENSMUST00000116522 Dnhd1D3Z2X2 4750 aa5.72□□□□□ -1.49
Nck1-202ENSMUST00000116522 Pkhd1l1Q80ZA4 4249 aa5.72□□□□□ -1.49
Nck1-202ENSMUST00000116522 PcloQ9QYX7 5068 aa5.67□□□□□ -1.5
Nck1-202ENSMUST00000116522 Krtap8-1O08633 61 aa5.67□□□□□ -1.5
Nck1-202ENSMUST00000116522 Krtap9-5A2A5X3 358 aa5.66□□□□□ -1.5
Nck1-202ENSMUST00000116522 Pkhd1E9PZ36 4059 aa5.61□□□□□ -1.51
Nck1-202ENSMUST00000116522 Lce1jD3YUU5 139 aa5.6□□□□□ -1.51
Nck1-202ENSMUST00000116522 Birc6O88738 4882 aa5.55□□□□□ -1.52
Nck1-202ENSMUST00000116522 Krtap1-3A2A588 173 aa5.54□□□□□ -1.52
Nck1-202ENSMUST00000116522 Krtap19-2Q925I0 141 aa5.43□□□□□ -1.54
Nck1-202ENSMUST00000116522 Herc1E9PZP8 4859 aa5.41□□□□□ -1.54
Nck1-202ENSMUST00000116522 Gm11563B1AQ90 168 aa5.41□□□□□ -1.54
Nck1-202ENSMUST00000116522 Krtap4-7Q9D732 168 aa5.41□□□□□ -1.54
Nck1-202ENSMUST00000116522 Prm1P02319 51 aa5.4□□□□□ -1.55
Nck1-202ENSMUST00000116522 2310046K23RikA0A0A6YVW6 87 aa5.38□□□□□ -1.55
Nck1-202ENSMUST00000116522 Mdn1A2ANY6 5589 aaKnown RBP5.37□□□□□ -1.55
Nck1-202ENSMUST00000116522 Mt2P02798 61 aa5.37□□□□□ -1.55
Nck1-202ENSMUST00000116522 Ubr4A2AN08 5180 aa5.36□□□□□ -1.55
Nck1-202ENSMUST00000116522 Gm7735D3YX18 52 aa5.33□□□□□ -1.56
Nck1-202ENSMUST00000116522 A0A1Y7VJH8 109 aa5.33□□□□□ -1.56
Nck1-202ENSMUST00000116522 Gm10272F7CZ33 110 aa5.29□□□□□ -1.56
Nck1-202ENSMUST00000116522 Gm11555B1AQ89 175 aa5.28□□□□□ -1.56
Nck1-202ENSMUST00000116522 Gm9789Q8BIG3 52 aa5.28□□□□□ -1.56
Nck1-202ENSMUST00000116522 4932415D10RikA0A1W2P6U8 4986 aa5.25□□□□□ -1.57
Nck1-202ENSMUST00000116522 Krtap28-13A0A087WQP5 138 aa5.23□□□□□ -1.57
Nck1-202ENSMUST00000116522 Krtap28-10A0A1Y7VP58 119 aa5.23□□□□□ -1.57
Nck1-202ENSMUST00000116522 Krtap22-2J3QNX6 67 aa5.2□□□□□ -1.58
Nck1-202ENSMUST00000116522 Sprr2kO70562 68 aa5.2□□□□□ -1.58
Nck1-202ENSMUST00000116522 ZanO88799 5376 aa5.19□□□□□ -1.58
Nck1-202ENSMUST00000116522 Gm10100J3QK64 120 aa5.16□□□□□ -1.58
Nck1-202ENSMUST00000116522 Fat4Q2PZL6 4981 aa5.16□□□□□ -1.58
Nck1-202ENSMUST00000116522 A0A1Y7VLE6 161 aa5.15□□□□□ -1.58
Nck1-202ENSMUST00000116522 Lce1iQ9D6P5 149 aa5.15□□□□□ -1.58
Nck1-202ENSMUST00000116522 A030005K14RikA0A1Y7VNY1 122 aa5.13□□□□□ -1.59
Nck1-202ENSMUST00000116522 Krtap17-1A2A5X6 109 aa5.11□□□□□ -1.59
Nck1-202ENSMUST00000116522 Ush2AQ2QI47 5193 aa5.1□□□□□ -1.59
Nck1-202ENSMUST00000116522 Lce1a2Q9D1K4 149 aa5.1□□□□□ -1.59
Nck1-202ENSMUST00000116522 Syne1Q6ZWR6 8799 aa5.08□□□□□ -1.6
Nck1-202ENSMUST00000116522 Gm10061D3Z714 54 aa5.07□□□□□ -1.6
Nck1-202ENSMUST00000116522 Lce3bQ9CQM7 98 aa5.07□□□□□ -1.6
Nck1-202ENSMUST00000116522 Rnf213E9Q555 5152 aaKnown RBP5.05□□□□□ -1.6
Nck1-202ENSMUST00000116522 Hmcn2A2AJ76 5100 aa5.03□□□□□ -1.6
Nck1-202ENSMUST00000116522 Lce3cQ91V05 98 aa5.03□□□□□ -1.6
Nck1-202ENSMUST00000116522 Krtap4-2B1AQ85 167 aa5.01□□□□□ -1.61
Nck1-202ENSMUST00000116522 Gm10142J3KMP7 120 aa4.99□□□□□ -1.61
Nck1-202ENSMUST00000116522 A0A1Y7VJ07 166 aa4.98□□□□□ -1.61
Nck1-202ENSMUST00000116522 Krtap9-3Q3V2C1 136 aa4.96□□□□□ -1.61
Nck1-202ENSMUST00000116522 Lce1hQ9D6R3 140 aa4.92□□□□□ -1.62
Nck1-202ENSMUST00000116522 Lce3eF8VQJ0 98 aa4.91□□□□□ -1.62
Nck1-202ENSMUST00000116522 Lce3fQ6PAI4 98 aa4.91□□□□□ -1.62
Nck1-202ENSMUST00000116522 Gm38119A0A0A6YX29 146 aa4.89□□□□□ -1.63
Nck1-202ENSMUST00000116522 Gm11569B1AQB1 180 aa4.87□□□□□ -1.63
Nck1-202ENSMUST00000116522 Sprr2gO70558 76 aa4.83□□□□□ -1.64
Nck1-202ENSMUST00000116522 Lce3dE9Q8V1 98 aa4.79□□□□□ -1.64
Nck1-202ENSMUST00000116522 A030014E15RikA0A1Y7VJV2 120 aa4.76□□□□□ -1.65
Nck1-202ENSMUST00000116522 A030005L19RikA0A1Y7VIU2 113 aa4.75□□□□□ -1.65
Nck1-202ENSMUST00000116522 Gm7544A0A1Y7VJ58 118 aa4.75□□□□□ -1.65
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms