RNA–Protein interactions for RNA: ENSMUST00000116359.2

Ctc1-202, Transcript of CST complex subunit CTC1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ctc1, Length 3,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-202ENSMUST00000116359 Fat1A0A1L1SQU7 4645 aa5.17□□□□□ -1.58
Ctc1-202ENSMUST00000116359 B930094E09RikQ8C4T2 136 aa5.15□□□□□ -1.59
Ctc1-202ENSMUST00000116359 2310057N15RikQ9D6T8 200 aa5.14□□□□□ -1.59
Ctc1-202ENSMUST00000116359 HydinQ80W93 5154 aa5.14□□□□□ -1.59
Ctc1-202ENSMUST00000116359 Krtap19-5O08632 62 aa5.13□□□□□ -1.59
Ctc1-202ENSMUST00000116359 Dnah8Q91XQ0 4731 aa5.09□□□□□ -1.59
Ctc1-202ENSMUST00000116359 Fam229aB2KGE5 128 aa5.08□□□□□ -1.6
Ctc1-202ENSMUST00000116359 Rps29P62274 56 aa5.08□□□□□ -1.6
Ctc1-202ENSMUST00000116359 Herc1E9PZP8 4859 aa5.08□□□□□ -1.6
Ctc1-202ENSMUST00000116359 Abca13Q5SSE9 5034 aa5.06□□□□□ -1.6
Ctc1-202ENSMUST00000116359 Fat2Q5F226 4351 aa5.05□□□□□ -1.6
Ctc1-202ENSMUST00000116359 Krtap3-1A2A591 98 aa5.05□□□□□ -1.6
Ctc1-202ENSMUST00000116359 Dnhd1D3Z2X2 4750 aa5.04□□□□□ -1.6
Ctc1-202ENSMUST00000116359 Kmt2cQ8BRH4 4903 aa5.04□□□□□ -1.6
Ctc1-202ENSMUST00000116359 Gm5767A0A0J9YTU8 78 aa5.01□□□□□ -1.61
Ctc1-202ENSMUST00000116359 Lrp2A2ARV4 4660 aa5.01□□□□□ -1.61
Ctc1-202ENSMUST00000116359 Gm9736A0A1W2P7N1 277 aa5□□□□□ -1.61
Ctc1-202ENSMUST00000116359 Gm40193A0A1B0GT39 78 aa4.99□□□□□ -1.61
Ctc1-202ENSMUST00000116359 Lrp1Q91ZX7 4545 aaKnown RBP4.99□□□□□ -1.61
Ctc1-202ENSMUST00000116359 Mycbp2Q7TPH6 4711 aa4.99□□□□□ -1.61
Ctc1-202ENSMUST00000116359 Krtap15-1Q9QZU5 150 aa4.97□□□□□ -1.61
Ctc1-202ENSMUST00000116359 Pkhd1l1Q80ZA4 4249 aa4.94□□□□□ -1.62
Ctc1-202ENSMUST00000116359 Fat3Q8BNA6 4555 aa4.93□□□□□ -1.62
Ctc1-202ENSMUST00000116359 Gm19402J3QJV4 266 aa4.86□□□□□ -1.63
Ctc1-202ENSMUST00000116359 4932415D10RikA0A1W2P6U8 4986 aa4.82□□□□□ -1.64
Ctc1-202ENSMUST00000116359 Prm1P02319 51 aa4.81□□□□□ -1.64
Ctc1-202ENSMUST00000116359 Gm17416Q30KP4 66 aa4.81□□□□□ -1.64
Ctc1-202ENSMUST00000116359 Gm7735D3YX18 52 aa4.81□□□□□ -1.64
Ctc1-202ENSMUST00000116359 2210017I01RikA0A0A6YVV1 95 aa4.8□□□□□ -1.64
Ctc1-202ENSMUST00000116359 BC029722A0A0N4SW31 51 aa4.8□□□□□ -1.64
Ctc1-202ENSMUST00000116359 Sec61bQ9CQS8 96 aaKnown RBP4.78□□□□□ -1.64
Ctc1-202ENSMUST00000116359 Ush2AQ2QI47 5193 aa4.76□□□□□ -1.65
Ctc1-202ENSMUST00000116359 Krtap13-1Q8K198 168 aa4.76□□□□□ -1.65
Ctc1-202ENSMUST00000116359 Ubr4A2AN08 5180 aa4.74□□□□□ -1.65
Ctc1-202ENSMUST00000116359 Gm17402F6Z0L5 76 aa4.72□□□□□ -1.65
Ctc1-202ENSMUST00000116359 Gm9789Q8BIG3 52 aa4.71□□□□□ -1.66
Ctc1-202ENSMUST00000116359 Crct1Q6PAI5 102 aa4.66□□□□□ -1.66
Ctc1-202ENSMUST00000116359 Sprr2a3Q4KL71 83 aa4.6□□□□□ -1.67
Ctc1-202ENSMUST00000116359 Sprr2a1Q9CQK8 83 aa4.6□□□□□ -1.67
Ctc1-202ENSMUST00000116359 Hmcn2A2AJ76 5100 aa4.59□□□□□ -1.68
Ctc1-202ENSMUST00000116359 Spink7Q6IE32 76 aa4.55□□□□□ -1.68
Ctc1-202ENSMUST00000116359 Camk2n1Q6QWF9 78 aa4.55□□□□□ -1.68
Ctc1-202ENSMUST00000116359 Gm10318A0A1W2P728 225 aa4.54□□□□□ -1.68
Ctc1-202ENSMUST00000116359 LorP18165 486 aa4.52□□□□□ -1.69
Ctc1-202ENSMUST00000116359 Krtap17-1A2A5X6 109 aa4.51□□□□□ -1.69
Ctc1-202ENSMUST00000116359 Krtap1-5A2A590 122 aa4.42□□□□□ -1.7
Ctc1-202ENSMUST00000116359 Krtap1-3A2A588 173 aa4.41□□□□□ -1.7
Ctc1-202ENSMUST00000116359 Tnp1P10856 55 aa4.4□□□□□ -1.7
Ctc1-202ENSMUST00000116359 Fat4Q2PZL6 4981 aa4.37□□□□□ -1.71
Ctc1-202ENSMUST00000116359 ZanO88799 5376 aa4.36□□□□□ -1.71
Ctc1-202ENSMUST00000116359 Rnf213E9Q555 5152 aaKnown RBP4.3□□□□□ -1.72
Ctc1-202ENSMUST00000116359 Krtap4-2B1AQ85 167 aa4.29□□□□□ -1.72
Ctc1-202ENSMUST00000116359 Gm10061D3Z714 54 aa4.25□□□□□ -1.73
Ctc1-202ENSMUST00000116359 Gm11569B1AQB1 180 aa4.24□□□□□ -1.73
Ctc1-202ENSMUST00000116359 Gm11562A0PK51 136 aa4.2□□□□□ -1.74
Ctc1-202ENSMUST00000116359 Krtap19-3Q925H6 87 aa4.19□□□□□ -1.74
Ctc1-202ENSMUST00000116359 Krtap16-3Q8C1I6 86 aa4.17□□□□□ -1.74
Ctc1-202ENSMUST00000116359 Lce1gQ9D195 139 aa4.16□□□□□ -1.74
Ctc1-202ENSMUST00000116359 Mdn1A2ANY6 5589 aaKnown RBP4.15□□□□□ -1.74
Ctc1-202ENSMUST00000116359 2310046K23RikA0A0A6YVW6 87 aa4.15□□□□□ -1.75
Ctc1-202ENSMUST00000116359 Krtap19-1Q925H2 87 aa4.13□□□□□ -1.75
Ctc1-202ENSMUST00000116359 Krtap1-4Q3V2D6 188 aa4.12□□□□□ -1.75
Ctc1-202ENSMUST00000116359 Syne2Q6ZWQ0 6874 aaKnown RBP4.1□□□□□ -1.75
Ctc1-202ENSMUST00000116359 Gm11596B1AQB0 205 aa3.99□□□□□ -1.77
Ctc1-202ENSMUST00000116359 Krtap4-6Q3V4B7 195 aa3.98□□□□□ -1.77
Ctc1-202ENSMUST00000116359 Lce1jD3YUU5 139 aa3.96□□□□□ -1.77
Ctc1-202ENSMUST00000116359 Krtap8-1O08633 61 aa3.93□□□□□ -1.78
Ctc1-202ENSMUST00000116359 Krtap9-3Q3V2C1 136 aa3.92□□□□□ -1.78
Ctc1-202ENSMUST00000116359 Lce1dQ9D731 133 aa3.92□□□□□ -1.78
Ctc1-202ENSMUST00000116359 Krtap9-5A2A5X3 358 aa3.89□□□□□ -1.79
Ctc1-202ENSMUST00000116359 SspoQ8CG65 4998 aa3.88□□□□□ -1.79
Ctc1-202ENSMUST00000116359 Krtap4-1Q3UUY3 169 aa3.87□□□□□ -1.79
Ctc1-202ENSMUST00000116359 Muc5bE9Q5I3 4800 aa3.87□□□□□ -1.79
Ctc1-202ENSMUST00000116359 Krtap19-9aF8WH65 55 aa3.86□□□□□ -1.79
Ctc1-202ENSMUST00000116359 Lce1hQ9D6R3 140 aa3.85□□□□□ -1.79
Ctc1-202ENSMUST00000116359 Krtap12-1Q9Z287 130 aa3.84□□□□□ -1.8
Ctc1-202ENSMUST00000116359 Krtap19-9bQ99NG9 58 aa3.83□□□□□ -1.8
Ctc1-202ENSMUST00000116359 Fsip2A2ARZ3 6995 aa3.83□□□□□ -1.8
Ctc1-202ENSMUST00000116359 Krtap19-2Q925I0 141 aa3.81□□□□□ -1.8
Ctc1-202ENSMUST00000116359 Gm11555B1AQ89 175 aa3.8□□□□□ -1.8
Ctc1-202ENSMUST00000116359 Gm11564A2A4L9 201 aa3.79□□□□□ -1.8
Ctc1-202ENSMUST00000116359 Gm11563B1AQ90 168 aa3.79□□□□□ -1.8
Ctc1-202ENSMUST00000116359 Gm11595B1AQA7 289 aa3.79□□□□□ -1.8
Ctc1-202ENSMUST00000116359 Krtap4-8B1AQA8 209 aa3.79□□□□□ -1.8
Ctc1-202ENSMUST00000116359 4933428G20RikQ9D3X4 101 aa3.76□□□□□ -1.81
Ctc1-202ENSMUST00000116359 Sprr2kO70562 68 aa3.75□□□□□ -1.81
Ctc1-202ENSMUST00000116359 Lce1eQ9D139 143 aa3.75□□□□□ -1.81
Ctc1-202ENSMUST00000116359 Krtap31-1Q9D644 177 aa3.73□□□□□ -1.81
Ctc1-202ENSMUST00000116359 Krtap4-9B1AQA9 244 aa3.71□□□□□ -1.82
Ctc1-202ENSMUST00000116359 Lce1a2Q9D1K4 149 aa3.71□□□□□ -1.82
Ctc1-202ENSMUST00000116359 Mt4P47945 62 aa3.7□□□□□ -1.82
Ctc1-202ENSMUST00000116359 Lce1iQ9D6P5 149 aa3.7□□□□□ -1.82
Ctc1-202ENSMUST00000116359 Sprr2gO70558 76 aa3.7□□□□□ -1.82
Ctc1-202ENSMUST00000116359 Gm11938Q9D3H4 131 aa3.7□□□□□ -1.82
Ctc1-202ENSMUST00000116359 Gm6358A0A087WPH4 74 aa3.65□□□□□ -1.82
Ctc1-202ENSMUST00000116359 Krtap4-13Q9D7P3 165 aa3.59□□□□□ -1.83
Ctc1-202ENSMUST00000116359 Gm38119A0A0A6YX29 146 aa3.57□□□□□ -1.84
Ctc1-202ENSMUST00000116359 Sprr2dO70555 85 aa3.55□□□□□ -1.84
Ctc1-202ENSMUST00000116359 Lce1lQ9D1G7 135 aa3.54□□□□□ -1.84
Ctc1-202ENSMUST00000116359 Mt2P02798 61 aa3.53□□□□□ -1.85
Retrieved 100 of 22,080 RNA–protein pairs in 35.9 ms