RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 Kmt2aP55200 3966 aa5.14□□□□□ -1.59
Ssh1-202ENSMUST00000112298 Ryr3A2AGL3 4863 aa5.14□□□□□ -1.59
Ssh1-202ENSMUST00000112298 Fras1Q80T14 4010 aa5.14□□□□□ -1.59
Ssh1-202ENSMUST00000112298 Ryr1E9PZQ0 5035 aa5.12□□□□□ -1.59
Ssh1-202ENSMUST00000112298 Dnah11E9Q7N9 4488 aa5.09□□□□□ -1.59
Ssh1-202ENSMUST00000112298 Dnah9B1AR51 4484 aa5.09□□□□□ -1.59
Ssh1-202ENSMUST00000112298 Dnah3Q8BW94 4083 aa5.06□□□□□ -1.6
Ssh1-202ENSMUST00000112298 Vps13dB1ART2 4390 aa5.05□□□□□ -1.6
Ssh1-202ENSMUST00000112298 Dnah5Q8VHE6 4621 aa5.04□□□□□ -1.6
Ssh1-202ENSMUST00000112298 Dync2h1Q45VK7 4306 aa5.04□□□□□ -1.6
Ssh1-202ENSMUST00000112298 Krtap12-1Q9Z287 130 aa5.01□□□□□ -1.61
Ssh1-202ENSMUST00000112298 Stard9Q80TF6 4561 aa4.99□□□□□ -1.61
Ssh1-202ENSMUST00000112298 Sprr2kO70562 68 aa4.99□□□□□ -1.61
Ssh1-202ENSMUST00000112298 Dnah1E9Q8T7 4250 aa4.96□□□□□ -1.62
Ssh1-202ENSMUST00000112298 LorP18165 486 aa4.95□□□□□ -1.62
Ssh1-202ENSMUST00000112298 Gm19402J3QJV4 266 aa4.94□□□□□ -1.62
Ssh1-202ENSMUST00000112298 Dync1h1Q9JHU4 4644 aaKnown RBP4.94□□□□□ -1.62
Ssh1-202ENSMUST00000112298 Dnah7aE9Q0T8 4024 aa4.89□□□□□ -1.63
Ssh1-202ENSMUST00000112298 Gm18596A0A1W2P860 280 aa4.89□□□□□ -1.63
Ssh1-202ENSMUST00000112298 ApobE9Q414 4505 aa4.89□□□□□ -1.63
Ssh1-202ENSMUST00000112298 Ryr2E9Q401 4966 aaKnown RBP4.88□□□□□ -1.63
Ssh1-202ENSMUST00000112298 Fat1A0A1L1SQU7 4645 aa4.84□□□□□ -1.63
Ssh1-202ENSMUST00000112298 Herc2Q4U2R1 4836 aa4.82□□□□□ -1.64
Ssh1-202ENSMUST00000112298 Dnah7cA0A087WR13 4024 aa4.82□□□□□ -1.64
Ssh1-202ENSMUST00000112298 Kiaa1109A2AAE1 5005 aa4.81□□□□□ -1.64
Ssh1-202ENSMUST00000112298 Dnah2P0C6F1 4456 aa4.8□□□□□ -1.64
Ssh1-202ENSMUST00000112298 Lrp1bQ9JI18 4599 aa4.8□□□□□ -1.64
Ssh1-202ENSMUST00000112298 Pkd1O08852 4293 aa4.8□□□□□ -1.64
Ssh1-202ENSMUST00000112298 Lrp1Q91ZX7 4545 aaKnown RBP4.78□□□□□ -1.64
Ssh1-202ENSMUST00000112298 Sprr2gO70558 76 aa4.77□□□□□ -1.65
Ssh1-202ENSMUST00000112298 Mycbp2Q7TPH6 4711 aa4.77□□□□□ -1.65
Ssh1-202ENSMUST00000112298 SacsQ9JLC8 4582 aa4.73□□□□□ -1.65
Ssh1-202ENSMUST00000112298 HydinQ80W93 5154 aa4.7□□□□□ -1.66
Ssh1-202ENSMUST00000112298 Lce1mQ9CR91 182 aa4.7□□□□□ -1.66
Ssh1-202ENSMUST00000112298 Lce3bQ9CQM7 98 aa4.68□□□□□ -1.66
Ssh1-202ENSMUST00000112298 Dnah8Q91XQ0 4731 aa4.66□□□□□ -1.66
Ssh1-202ENSMUST00000112298 Fat3Q8BNA6 4555 aa4.66□□□□□ -1.66
Ssh1-202ENSMUST00000112298 Lrp2A2ARV4 4660 aa4.65□□□□□ -1.66
Ssh1-202ENSMUST00000112298 Abca13Q5SSE9 5034 aa4.62□□□□□ -1.67
Ssh1-202ENSMUST00000112298 Hectd4E9Q2E4 4418 aa4.62□□□□□ -1.67
Ssh1-202ENSMUST00000112298 Gm10100J3QK64 120 aa4.62□□□□□ -1.67
Ssh1-202ENSMUST00000112298 Lce3cQ91V05 98 aa4.61□□□□□ -1.67
Ssh1-202ENSMUST00000112298 2310046K23RikA0A0A6YVW6 87 aa4.6□□□□□ -1.67
Ssh1-202ENSMUST00000112298 Krtap9-5A2A5X3 358 aa4.57□□□□□ -1.68
Ssh1-202ENSMUST00000112298 Kmt2cQ8BRH4 4903 aa4.57□□□□□ -1.68
Ssh1-202ENSMUST00000112298 Birc6O88738 4882 aa4.54□□□□□ -1.68
Ssh1-202ENSMUST00000112298 Dnhd1D3Z2X2 4750 aa4.54□□□□□ -1.68
Ssh1-202ENSMUST00000112298 Gm10272F7CZ33 110 aa4.53□□□□□ -1.68
Ssh1-202ENSMUST00000112298 Gm10142J3KMP7 120 aa4.52□□□□□ -1.69
Ssh1-202ENSMUST00000112298 Krtap19-3Q925H6 87 aa4.52□□□□□ -1.69
Ssh1-202ENSMUST00000112298 Krtap16-3Q8C1I6 86 aa4.52□□□□□ -1.69
Ssh1-202ENSMUST00000112298 Fat2Q5F226 4351 aa4.52□□□□□ -1.69
Ssh1-202ENSMUST00000112298 Lce3eF8VQJ0 98 aa4.48□□□□□ -1.69
Ssh1-202ENSMUST00000112298 Lce3fQ6PAI4 98 aa4.48□□□□□ -1.69
Ssh1-202ENSMUST00000112298 PcloQ9QYX7 5068 aa4.48□□□□□ -1.69
Ssh1-202ENSMUST00000112298 Lce3dE9Q8V1 98 aa4.47□□□□□ -1.69
Ssh1-202ENSMUST00000112298 Pkhd1E9PZ36 4059 aa4.46□□□□□ -1.69
Ssh1-202ENSMUST00000112298 Krtap22-2J3QNX6 67 aa4.43□□□□□ -1.7
Ssh1-202ENSMUST00000112298 Herc1E9PZP8 4859 aa4.42□□□□□ -1.7
Ssh1-202ENSMUST00000112298 Krtap19-1Q925H2 87 aa4.42□□□□□ -1.7
Ssh1-202ENSMUST00000112298 Prm1P02319 51 aa4.39□□□□□ -1.71
Ssh1-202ENSMUST00000112298 Lce3aQ497I5 98 aa4.38□□□□□ -1.71
Ssh1-202ENSMUST00000112298 Pkhd1l1Q80ZA4 4249 aa4.37□□□□□ -1.71
Ssh1-202ENSMUST00000112298 Mt2P02798 61 aa4.37□□□□□ -1.71
Ssh1-202ENSMUST00000112298 Vps13bQ80TY5 3993 aa4.35□□□□□ -1.71
Ssh1-202ENSMUST00000112298 Sprr2iO70560 76 aa4.35□□□□□ -1.71
Ssh1-202ENSMUST00000112298 Gm7735D3YX18 52 aa4.29□□□□□ -1.72
Ssh1-202ENSMUST00000112298 Ubr4A2AN08 5180 aa4.24□□□□□ -1.73
Ssh1-202ENSMUST00000112298 Krtap19-2Q925I0 141 aa4.24□□□□□ -1.73
Ssh1-202ENSMUST00000112298 Gm9789Q8BIG3 52 aa4.23□□□□□ -1.73
Ssh1-202ENSMUST00000112298 Gm10024A0A0A0MQA4 119 aa4.22□□□□□ -1.73
Ssh1-202ENSMUST00000112298 Gm38119A0A0A6YX29 146 aa4.21□□□□□ -1.74
Ssh1-202ENSMUST00000112298 Ush2AQ2QI47 5193 aa4.19□□□□□ -1.74
Ssh1-202ENSMUST00000112298 4932415D10RikA0A1W2P6U8 4986 aa4.18□□□□□ -1.74
Ssh1-202ENSMUST00000112298 Lce1jD3YUU5 139 aa4.17□□□□□ -1.74
Ssh1-202ENSMUST00000112298 Lce1gQ9D195 139 aa4.17□□□□□ -1.74
Ssh1-202ENSMUST00000112298 Lce1iQ9D6P5 149 aa4.17□□□□□ -1.74
Ssh1-202ENSMUST00000112298 Lce1hQ9D6R3 140 aa4.17□□□□□ -1.74
Ssh1-202ENSMUST00000112298 Krtap1-3A2A588 173 aa4.17□□□□□ -1.74
Ssh1-202ENSMUST00000112298 Krtap19-4Q925H7 84 aa4.16□□□□□ -1.74
Ssh1-202ENSMUST00000112298 Lce1fB9EJP6 147 aa4.14□□□□□ -1.75
Ssh1-202ENSMUST00000112298 Lce1cQ9D1C5 147 aa4.14□□□□□ -1.75
Ssh1-202ENSMUST00000112298 Lce1lQ9D1G7 135 aa4.14□□□□□ -1.75
Ssh1-202ENSMUST00000112298 Lce1dQ9D731 133 aa4.14□□□□□ -1.75
Ssh1-202ENSMUST00000112298 Krtap9-3Q3V2C1 136 aa4.12□□□□□ -1.75
Ssh1-202ENSMUST00000112298 Sprr2eO70556 76 aa4.1□□□□□ -1.75
Ssh1-202ENSMUST00000112298 Lce1bQ9D149 137 aa4.08□□□□□ -1.76
Ssh1-202ENSMUST00000112298 Lce1eQ9D139 143 aa4.08□□□□□ -1.76
Ssh1-202ENSMUST00000112298 Sprr2fO70557 76 aa4.07□□□□□ -1.76
Ssh1-202ENSMUST00000112298 Hmcn2A2AJ76 5100 aa4□□□□□ -1.77
Ssh1-202ENSMUST00000112298 Fat4Q2PZL6 4981 aa3.98□□□□□ -1.77
Ssh1-202ENSMUST00000112298 ZanO88799 5376 aa3.97□□□□□ -1.77
Ssh1-202ENSMUST00000112298 Gm10061D3Z714 54 aa3.95□□□□□ -1.78
Ssh1-202ENSMUST00000112298 Gm11569B1AQB1 180 aa3.87□□□□□ -1.79
Ssh1-202ENSMUST00000112298 Mdn1A2ANY6 5589 aaKnown RBP3.86□□□□□ -1.79
Ssh1-202ENSMUST00000112298 Rnf213E9Q555 5152 aaKnown RBP3.85□□□□□ -1.79
Ssh1-202ENSMUST00000112298 Sprr2hO70559 108 aa3.81□□□□□ -1.8
Ssh1-202ENSMUST00000112298 Mt4P47945 62 aa3.74□□□□□ -1.81
Ssh1-202ENSMUST00000112298 Krtap4-2B1AQ85 167 aa3.73□□□□□ -1.81
Ssh1-202ENSMUST00000112298 Krtap17-1A2A5X6 109 aa3.73□□□□□ -1.81
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms