RNA–Protein interactions for RNA: ENSMUST00000088546.11

Fmr1-201, Transcript of Synaptic functional regulator FMR1, mousemouse

TSL 1 (best) BASIC

Gene Fmr1, Length 4,409 nt, Biotype protein coding, Subcellular localisation Dendrite, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fmr1-201ENSMUST00000088546 Dnah6E9Q0B6 4144 aa7.78□□□□□ -1.16
Fmr1-201ENSMUST00000088546 Dnah1E9Q8T7 4250 aa7.74□□□□□ -1.17
Fmr1-201ENSMUST00000088546 Lrp1Q91ZX7 4545 aaKnown RBP7.72□□□□□ -1.17
Fmr1-201ENSMUST00000088546 Gm19402J3QJV4 266 aa7.68□□□□□ -1.18
Fmr1-201ENSMUST00000088546 Dync2h1Q45VK7 4306 aa7.67□□□□□ -1.18
Fmr1-201ENSMUST00000088546 Dync1h1Q9JHU4 4644 aaKnown RBP7.67□□□□□ -1.18
Fmr1-201ENSMUST00000088546 Vps13bQ80TY5 3993 aa7.67□□□□□ -1.18
Fmr1-201ENSMUST00000088546 Dnah7cA0A087WR13 4024 aa7.62□□□□□ -1.19
Fmr1-201ENSMUST00000088546 Mycbp2Q7TPH6 4711 aa7.6□□□□□ -1.19
Fmr1-201ENSMUST00000088546 SacsQ9JLC8 4582 aa7.59□□□□□ -1.19
Fmr1-201ENSMUST00000088546 Ryr1E9PZQ0 5035 aa7.57□□□□□ -1.2
Fmr1-201ENSMUST00000088546 Fat3Q8BNA6 4555 aa7.57□□□□□ -1.2
Fmr1-201ENSMUST00000088546 TnxbO35452 4006 aa7.57□□□□□ -1.2
Fmr1-201ENSMUST00000088546 Sprr2a3Q4KL71 83 aa7.56□□□□□ -1.2
Fmr1-201ENSMUST00000088546 Sprr2a1Q9CQK8 83 aa7.56□□□□□ -1.2
Fmr1-201ENSMUST00000088546 Ryr3A2AGL3 4863 aa7.51□□□□□ -1.21
Fmr1-201ENSMUST00000088546 Krtap1-5A2A590 122 aa7.5□□□□□ -1.21
Fmr1-201ENSMUST00000088546 Dnah7aE9Q0T8 4024 aa7.46□□□□□ -1.22
Fmr1-201ENSMUST00000088546 HydinQ80W93 5154 aa7.43□□□□□ -1.22
Fmr1-201ENSMUST00000088546 Fras1Q80T14 4010 aa7.4□□□□□ -1.22
Fmr1-201ENSMUST00000088546 Fat1A0A1L1SQU7 4645 aa7.35□□□□□ -1.23
Fmr1-201ENSMUST00000088546 Krtap1-4Q3V2D6 188 aa7.24□□□□□ -1.25
Fmr1-201ENSMUST00000088546 Fat2Q5F226 4351 aa7.21□□□□□ -1.26
Fmr1-201ENSMUST00000088546 Pkd1O08852 4293 aa7.19□□□□□ -1.26
Fmr1-201ENSMUST00000088546 4933428G20RikQ9D3X4 101 aa7.16□□□□□ -1.26
Fmr1-201ENSMUST00000088546 Lrp2A2ARV4 4660 aa7.16□□□□□ -1.26
Fmr1-201ENSMUST00000088546 Kiaa1109A2AAE1 5005 aa7.16□□□□□ -1.26
Fmr1-201ENSMUST00000088546 Krtap19-9aF8WH65 55 aa7.07□□□□□ -1.28
Fmr1-201ENSMUST00000088546 LorP18165 486 aa7.04□□□□□ -1.28
Fmr1-201ENSMUST00000088546 Herc2Q4U2R1 4836 aa7.02□□□□□ -1.29
Fmr1-201ENSMUST00000088546 Dnah8Q91XQ0 4731 aa7.02□□□□□ -1.29
Fmr1-201ENSMUST00000088546 Krtap16-3Q8C1I6 86 aa6.97□□□□□ -1.29
Fmr1-201ENSMUST00000088546 Krtap12-1Q9Z287 130 aa6.96□□□□□ -1.3
Fmr1-201ENSMUST00000088546 Kmt2cQ8BRH4 4903 aa6.9□□□□□ -1.3
Fmr1-201ENSMUST00000088546 Krtap19-9bQ99NG9 58 aa6.87□□□□□ -1.31
Fmr1-201ENSMUST00000088546 Krtap19-3Q925H6 87 aa6.85□□□□□ -1.31
Fmr1-201ENSMUST00000088546 Abca13Q5SSE9 5034 aa6.83□□□□□ -1.32
Fmr1-201ENSMUST00000088546 Pkhd1l1Q80ZA4 4249 aa6.78□□□□□ -1.32
Fmr1-201ENSMUST00000088546 Krtap19-1Q925H2 87 aa6.78□□□□□ -1.32
Fmr1-201ENSMUST00000088546 Ryr2E9Q401 4966 aaKnown RBP6.78□□□□□ -1.32
Fmr1-201ENSMUST00000088546 Gm6358A0A087WPH4 74 aa6.74□□□□□ -1.33
Fmr1-201ENSMUST00000088546 Gm18596A0A1W2P860 280 aa6.56□□□□□ -1.36
Fmr1-201ENSMUST00000088546 Krtap8-1O08633 61 aa6.56□□□□□ -1.36
Fmr1-201ENSMUST00000088546 Lce1jD3YUU5 139 aa6.56□□□□□ -1.36
Fmr1-201ENSMUST00000088546 Pkhd1E9PZ36 4059 aa6.55□□□□□ -1.36
Fmr1-201ENSMUST00000088546 Dnhd1D3Z2X2 4750 aa6.54□□□□□ -1.36
Fmr1-201ENSMUST00000088546 PcloQ9QYX7 5068 aa6.51□□□□□ -1.37
Fmr1-201ENSMUST00000088546 2310046K23RikA0A0A6YVW6 87 aa6.47□□□□□ -1.37
Fmr1-201ENSMUST00000088546 Krtap9-5A2A5X3 358 aa6.47□□□□□ -1.37
Fmr1-201ENSMUST00000088546 Krtap1-3A2A588 173 aa6.28□□□□□ -1.4
Fmr1-201ENSMUST00000088546 Lce1mQ9CR91 182 aa6.27□□□□□ -1.41
Fmr1-201ENSMUST00000088546 Herc1E9PZP8 4859 aa6.26□□□□□ -1.41
Fmr1-201ENSMUST00000088546 Birc6O88738 4882 aa6.26□□□□□ -1.41
Fmr1-201ENSMUST00000088546 Ubr4A2AN08 5180 aa6.25□□□□□ -1.41
Fmr1-201ENSMUST00000088546 Syne1Q6ZWR6 8799 aa6.22□□□□□ -1.41
Fmr1-201ENSMUST00000088546 Krtap19-2Q925I0 141 aa6.21□□□□□ -1.42
Fmr1-201ENSMUST00000088546 Gm10272F7CZ33 110 aa6.2□□□□□ -1.42
Fmr1-201ENSMUST00000088546 Mdn1A2ANY6 5589 aaKnown RBP6.19□□□□□ -1.42
Fmr1-201ENSMUST00000088546 Gm10100J3QK64 120 aa6.17□□□□□ -1.42
Fmr1-201ENSMUST00000088546 Mt2P02798 61 aa6.17□□□□□ -1.42
Fmr1-201ENSMUST00000088546 Fat4Q2PZL6 4981 aa6.15□□□□□ -1.42
Fmr1-201ENSMUST00000088546 ZanO88799 5376 aa6.09□□□□□ -1.43
Fmr1-201ENSMUST00000088546 Lce1iQ9D6P5 149 aa6.02□□□□□ -1.44
Fmr1-201ENSMUST00000088546 4932415D10RikA0A1W2P6U8 4986 aa6.01□□□□□ -1.45
Fmr1-201ENSMUST00000088546 Krtap17-1A2A5X6 109 aa5.99□□□□□ -1.45
Fmr1-201ENSMUST00000088546 Lce3bQ9CQM7 98 aa5.99□□□□□ -1.45
Fmr1-201ENSMUST00000088546 Krtap9-3Q3V2C1 136 aa5.97□□□□□ -1.45
Fmr1-201ENSMUST00000088546 Gm10142J3KMP7 120 aa5.97□□□□□ -1.45
Fmr1-201ENSMUST00000088546 Lce1a2Q9D1K4 149 aa5.97□□□□□ -1.45
Fmr1-201ENSMUST00000088546 Ush2AQ2QI47 5193 aa5.96□□□□□ -1.45
Fmr1-201ENSMUST00000088546 Hmcn2A2AJ76 5100 aa5.96□□□□□ -1.46
Fmr1-201ENSMUST00000088546 Krtap22-2J3QNX6 67 aa5.95□□□□□ -1.46
Fmr1-201ENSMUST00000088546 Lce1hQ9D6R3 140 aa5.89□□□□□ -1.47
Fmr1-201ENSMUST00000088546 Prm1P02319 51 aa5.88□□□□□ -1.47
Fmr1-201ENSMUST00000088546 Rnf213E9Q555 5152 aaKnown RBP5.86□□□□□ -1.47
Fmr1-201ENSMUST00000088546 Lce3cQ91V05 98 aa5.83□□□□□ -1.48
Fmr1-201ENSMUST00000088546 Gm7735D3YX18 52 aa5.82□□□□□ -1.48
Fmr1-201ENSMUST00000088546 Gm9789Q8BIG3 52 aa5.81□□□□□ -1.48
Fmr1-201ENSMUST00000088546 Sprr2gO70558 76 aa5.79□□□□□ -1.48
Fmr1-201ENSMUST00000088546 Muc16A0A140LJ72 8478 aa5.76□□□□□ -1.49
Fmr1-201ENSMUST00000088546 Sprr2kO70562 68 aa5.73□□□□□ -1.49
Fmr1-201ENSMUST00000088546 Lce3dE9Q8V1 98 aa5.73□□□□□ -1.49
Fmr1-201ENSMUST00000088546 Lce3eF8VQJ0 98 aa5.73□□□□□ -1.49
Fmr1-201ENSMUST00000088546 Lce3fQ6PAI4 98 aa5.73□□□□□ -1.49
Fmr1-201ENSMUST00000088546 Gm10061D3Z714 54 aa5.64□□□□□ -1.51
Fmr1-201ENSMUST00000088546 Lce1dQ9D731 133 aa5.6□□□□□ -1.51
Fmr1-201ENSMUST00000088546 Lce3aQ497I5 98 aa5.55□□□□□ -1.52
Fmr1-201ENSMUST00000088546 Gm11938Q9D3H4 131 aa5.53□□□□□ -1.52
Fmr1-201ENSMUST00000088546 Gm38119A0A0A6YX29 146 aa5.49□□□□□ -1.53
Fmr1-201ENSMUST00000088546 Krtap19-4Q925H7 84 aa5.44□□□□□ -1.54
Fmr1-201ENSMUST00000088546 Sprr2dO70555 85 aa5.4□□□□□ -1.55
Fmr1-201ENSMUST00000088546 Lce1gQ9D195 139 aa5.38□□□□□ -1.55
Fmr1-201ENSMUST00000088546 Gm11569B1AQB1 180 aa5.36□□□□□ -1.55
Fmr1-201ENSMUST00000088546 Lce1eQ9D139 143 aa5.33□□□□□ -1.56
Fmr1-201ENSMUST00000088546 Lce1cQ9D1C5 147 aa5.28□□□□□ -1.56
Fmr1-201ENSMUST00000088546 Krtap31-1Q9D644 177 aa5.25□□□□□ -1.57
Fmr1-201ENSMUST00000088546 Lce1fB9EJP6 147 aa5.24□□□□□ -1.57
Fmr1-201ENSMUST00000088546 Lce1lQ9D1G7 135 aa5.24□□□□□ -1.57
Fmr1-201ENSMUST00000088546 Lce1bQ9D149 137 aa5.24□□□□□ -1.57
Fmr1-201ENSMUST00000088546 Fsip2A2ARZ3 6995 aa5.23□□□□□ -1.57
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms