RNA–Protein interactions for RNA: ENSMUST00000077489.11

Scn1a-201, Transcript of Sodium channel protein type 1 subunit alpha, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Scn1a, Length 8,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1a-201ENSMUST00000077489 Dnah2P0C6F1 4456 aa2.71□□□□□ -1.98
Scn1a-201ENSMUST00000077489 Gm6358A0A087WPH4 74 aa2.69□□□□□ -1.98
Scn1a-201ENSMUST00000077489 Fbn1Q61554 2873 aaKnown RBP2.68□□□□□ -1.98
Scn1a-201ENSMUST00000077489 Dnah3Q8BW94 4083 aa2.66□□□□□ -1.98
Scn1a-201ENSMUST00000077489 Dnah1E9Q8T7 4250 aa2.64□□□□□ -1.99
Scn1a-201ENSMUST00000077489 Krtap12-1Q9Z287 130 aa2.63□□□□□ -1.99
Scn1a-201ENSMUST00000077489 Dnah17Q69Z23 4481 aa2.63□□□□□ -1.99
Scn1a-201ENSMUST00000077489 Dnah10D3YYQ8 4591 aa2.63□□□□□ -1.99
Scn1a-201ENSMUST00000077489 Fras1Q80T14 4010 aa2.57□□□□□ -2
Scn1a-201ENSMUST00000077489 Vps13dB1ART2 4390 aa2.57□□□□□ -2
Scn1a-201ENSMUST00000077489 Gm19402J3QJV4 266 aa2.57□□□□□ -2
Scn1a-201ENSMUST00000077489 Dnah14A0A140LIJ4 4489 aa2.57□□□□□ -2
Scn1a-201ENSMUST00000077489 Csmd3Q80T79 3707 aa2.56□□□□□ -2
Scn1a-201ENSMUST00000077489 Stard9Q80TF6 4561 aa2.56□□□□□ -2
Scn1a-201ENSMUST00000077489 Gm18596A0A1W2P860 280 aa2.55□□□□□ -2
Scn1a-201ENSMUST00000077489 Sprr2kO70562 68 aa2.55□□□□□ -2
Scn1a-201ENSMUST00000077489 Dnah6E9Q0B6 4144 aa2.54□□□□□ -2
Scn1a-201ENSMUST00000077489 Pkd1O08852 4293 aa2.54□□□□□ -2
Scn1a-201ENSMUST00000077489 Dnah5Q8VHE6 4621 aa2.54□□□□□ -2
Scn1a-201ENSMUST00000077489 LorP18165 486 aa2.54□□□□□ -2
Scn1a-201ENSMUST00000077489 Dnah7bL7N1Y0 4068 aa2.54□□□□□ -2
Scn1a-201ENSMUST00000077489 Dync1h1Q9JHU4 4644 aaKnown RBP2.53□□□□□ -2
Scn1a-201ENSMUST00000077489 Dync2h1Q45VK7 4306 aa2.52□□□□□ -2.01
Scn1a-201ENSMUST00000077489 Herc1E9PZP8 4859 aa2.51□□□□□ -2.01
Scn1a-201ENSMUST00000077489 Krtap4-1Q3UUY3 169 aa2.5□□□□□ -2.01
Scn1a-201ENSMUST00000077489 SacsQ9JLC8 4582 aa2.49□□□□□ -2.01
Scn1a-201ENSMUST00000077489 PlecQ9QXS1 4691 aaKnown RBP2.49□□□□□ -2.01
Scn1a-201ENSMUST00000077489 PcloQ9QYX7 5068 aa2.48□□□□□ -2.01
Scn1a-201ENSMUST00000077489 A030014E15RikA0A1Y7VJV2 120 aa2.47□□□□□ -2.01
Scn1a-201ENSMUST00000077489 PrkdcP97313 4128 aa2.46□□□□□ -2.02
Scn1a-201ENSMUST00000077489 Sprr2gO70558 76 aa2.46□□□□□ -2.02
Scn1a-201ENSMUST00000077489 2310046K23RikA0A0A6YVW6 87 aa2.46□□□□□ -2.02
Scn1a-201ENSMUST00000077489 Muc6Q80T03 2850 aa2.45□□□□□ -2.02
Scn1a-201ENSMUST00000077489 Lce3bQ9CQM7 98 aa2.45□□□□□ -2.02
Scn1a-201ENSMUST00000077489 Dnah11E9Q7N9 4488 aa2.45□□□□□ -2.02
Scn1a-201ENSMUST00000077489 Ryr2E9Q401 4966 aaKnown RBP2.44□□□□□ -2.02
Scn1a-201ENSMUST00000077489 Dnah9B1AR51 4484 aa2.44□□□□□ -2.02
Scn1a-201ENSMUST00000077489 Abca13Q5SSE9 5034 aa2.42□□□□□ -2.02
Scn1a-201ENSMUST00000077489 Dnah7aE9Q0T8 4024 aa2.42□□□□□ -2.02
Scn1a-201ENSMUST00000077489 Hectd4E9Q2E4 4418 aa2.42□□□□□ -2.02
Scn1a-201ENSMUST00000077489 Ryr3A2AGL3 4863 aa2.42□□□□□ -2.02
Scn1a-201ENSMUST00000077489 Lce1mQ9CR91 182 aa2.41□□□□□ -2.02
Scn1a-201ENSMUST00000077489 Birc6O88738 4882 aa2.41□□□□□ -2.02
Scn1a-201ENSMUST00000077489 Kmt2aP55200 3966 aa2.4□□□□□ -2.02
Scn1a-201ENSMUST00000077489 Dnah7cA0A087WR13 4024 aa2.4□□□□□ -2.03
Scn1a-201ENSMUST00000077489 ApobE9Q414 4505 aa2.39□□□□□ -2.03
Scn1a-201ENSMUST00000077489 Krtap9-5A2A5X3 358 aa2.39□□□□□ -2.03
Scn1a-201ENSMUST00000077489 Krtap19-3Q925H6 87 aa2.38□□□□□ -2.03
Scn1a-201ENSMUST00000077489 Krtap16-3Q8C1I6 86 aa2.38□□□□□ -2.03
Scn1a-201ENSMUST00000077489 Gm10272F7CZ33 110 aa2.38□□□□□ -2.03
Scn1a-201ENSMUST00000077489 Fat2Q5F226 4351 aa2.38□□□□□ -2.03
Scn1a-201ENSMUST00000077489 Lce3cQ91V05 98 aa2.37□□□□□ -2.03
Scn1a-201ENSMUST00000077489 Prm1P02319 51 aa2.37□□□□□ -2.03
Scn1a-201ENSMUST00000077489 Lce3dE9Q8V1 98 aa2.36□□□□□ -2.03
Scn1a-201ENSMUST00000077489 Gm10100J3QK64 120 aa2.36□□□□□ -2.03
Scn1a-201ENSMUST00000077489 Gm10142J3KMP7 120 aa2.35□□□□□ -2.03
Scn1a-201ENSMUST00000077489 Kmt2cQ8BRH4 4903 aa2.34□□□□□ -2.03
Scn1a-201ENSMUST00000077489 Fat1A0A1L1SQU7 4645 aa2.34□□□□□ -2.04
Scn1a-201ENSMUST00000077489 HydinQ80W93 5154 aa2.34□□□□□ -2.04
Scn1a-201ENSMUST00000077489 Pkhd1l1Q80ZA4 4249 aa2.34□□□□□ -2.04
Scn1a-201ENSMUST00000077489 Krtap31-2Q8CAY5 177 aa2.33□□□□□ -2.04
Scn1a-201ENSMUST00000077489 Krtap19-1Q925H2 87 aa2.33□□□□□ -2.04
Scn1a-201ENSMUST00000077489 Lce3eF8VQJ0 98 aa2.32□□□□□ -2.04
Scn1a-201ENSMUST00000077489 Lce3fQ6PAI4 98 aa2.32□□□□□ -2.04
Scn1a-201ENSMUST00000077489 Dnah8Q91XQ0 4731 aa2.32□□□□□ -2.04
Scn1a-201ENSMUST00000077489 Sprr2iO70560 76 aa2.31□□□□□ -2.04
Scn1a-201ENSMUST00000077489 Krtap22-2J3QNX6 67 aa2.31□□□□□ -2.04
Scn1a-201ENSMUST00000077489 Gm11563B1AQ90 168 aa2.31□□□□□ -2.04
Scn1a-201ENSMUST00000077489 Krtap4-7Q9D732 168 aa2.31□□□□□ -2.04
Scn1a-201ENSMUST00000077489 Herc2Q4U2R1 4836 aa2.29□□□□□ -2.04
Scn1a-201ENSMUST00000077489 Krtap31-1Q9D644 177 aa2.29□□□□□ -2.04
Scn1a-201ENSMUST00000077489 Lrp1bQ9JI18 4599 aa2.28□□□□□ -2.04
Scn1a-201ENSMUST00000077489 Lce3aQ497I5 98 aa2.28□□□□□ -2.04
Scn1a-201ENSMUST00000077489 Mycbp2Q7TPH6 4711 aa2.27□□□□□ -2.05
Scn1a-201ENSMUST00000077489 Mt2P02798 61 aa2.27□□□□□ -2.05
Scn1a-201ENSMUST00000077489 Krtap19-4Q925H7 84 aa2.25□□□□□ -2.05
Scn1a-201ENSMUST00000077489 Dnhd1D3Z2X2 4750 aa2.25□□□□□ -2.05
Scn1a-201ENSMUST00000077489 Pkhd1E9PZ36 4059 aa2.24□□□□□ -2.05
Scn1a-201ENSMUST00000077489 Lrp1Q91ZX7 4545 aaKnown RBP2.24□□□□□ -2.05
Scn1a-201ENSMUST00000077489 Krtap19-2Q925I0 141 aa2.22□□□□□ -2.05
Scn1a-201ENSMUST00000077489 Gm10024A0A0A0MQA4 119 aa2.21□□□□□ -2.06
Scn1a-201ENSMUST00000077489 Ubr4A2AN08 5180 aa2.2□□□□□ -2.06
Scn1a-201ENSMUST00000077489 Kiaa1109A2AAE1 5005 aa2.2□□□□□ -2.06
Scn1a-201ENSMUST00000077489 Fat3Q8BNA6 4555 aa2.19□□□□□ -2.06
Scn1a-201ENSMUST00000077489 Gm7735D3YX18 52 aa2.19□□□□□ -2.06
Scn1a-201ENSMUST00000077489 Lrp2A2ARV4 4660 aa2.19□□□□□ -2.06
Scn1a-201ENSMUST00000077489 Gm9789Q8BIG3 52 aa2.18□□□□□ -2.06
Scn1a-201ENSMUST00000077489 Vps13bQ80TY5 3993 aa2.18□□□□□ -2.06
Scn1a-201ENSMUST00000077489 Hmcn2A2AJ76 5100 aa2.17□□□□□ -2.06
Scn1a-201ENSMUST00000077489 Krtap9-3Q3V2C1 136 aa2.17□□□□□ -2.06
Scn1a-201ENSMUST00000077489 Krtap1-3A2A588 173 aa2.16□□□□□ -2.06
Scn1a-201ENSMUST00000077489 Gm38119A0A0A6YX29 146 aa2.15□□□□□ -2.07
Scn1a-201ENSMUST00000077489 Gm11555B1AQ89 175 aa2.15□□□□□ -2.07
Scn1a-201ENSMUST00000077489 Lce1fB9EJP6 147 aa2.14□□□□□ -2.07
Scn1a-201ENSMUST00000077489 Lce1cQ9D1C5 147 aa2.14□□□□□ -2.07
Scn1a-201ENSMUST00000077489 Lce1lQ9D1G7 135 aa2.14□□□□□ -2.07
Scn1a-201ENSMUST00000077489 Lce1dQ9D731 133 aa2.14□□□□□ -2.07
Scn1a-201ENSMUST00000077489 Lce1jD3YUU5 139 aa2.13□□□□□ -2.07
Scn1a-201ENSMUST00000077489 Lce1gQ9D195 139 aa2.13□□□□□ -2.07
Scn1a-201ENSMUST00000077489 Lce1iQ9D6P5 149 aa2.13□□□□□ -2.07
Retrieved 100 of 22,080 RNA–protein pairs in 43.9 ms