RNA–Protein interactions for RNA: ENSMUST00000053287.5

Usp42-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 42, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usp42, Length 5,151 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp42-201ENSMUST00000053287 Gm17402F6Z0L5 76 aa6.92□□□□□ -1.3
Usp42-201ENSMUST00000053287 Fat2Q5F226 4351 aa6.91□□□□□ -1.3
Usp42-201ENSMUST00000053287 Pkhd1E9PZ36 4059 aa6.86□□□□□ -1.31
Usp42-201ENSMUST00000053287 2310057N15RikQ9D6T8 200 aa6.81□□□□□ -1.32
Usp42-201ENSMUST00000053287 Pkhd1l1Q80ZA4 4249 aa6.81□□□□□ -1.32
Usp42-201ENSMUST00000053287 Sec61bQ9CQS8 96 aaKnown RBP6.78□□□□□ -1.32
Usp42-201ENSMUST00000053287 Vps13bQ80TY5 3993 aa6.77□□□□□ -1.33
Usp42-201ENSMUST00000053287 Krtap19-5O08632 62 aa6.77□□□□□ -1.33
Usp42-201ENSMUST00000053287 Dync1h1Q9JHU4 4644 aaKnown RBP6.77□□□□□ -1.33
Usp42-201ENSMUST00000053287 Krtap13-1Q8K198 168 aa6.72□□□□□ -1.33
Usp42-201ENSMUST00000053287 Fat1A0A1L1SQU7 4645 aa6.69□□□□□ -1.34
Usp42-201ENSMUST00000053287 Gm19668J3QMD1 248 aa6.63□□□□□ -1.35
Usp42-201ENSMUST00000053287 Fat3Q8BNA6 4555 aa6.62□□□□□ -1.35
Usp42-201ENSMUST00000053287 Gm19402J3QJV4 266 aa6.58□□□□□ -1.36
Usp42-201ENSMUST00000053287 Tnp1P10856 55 aa6.56□□□□□ -1.36
Usp42-201ENSMUST00000053287 Lrp1Q91ZX7 4545 aaKnown RBP6.56□□□□□ -1.36
Usp42-201ENSMUST00000053287 Sprr2a3Q4KL71 83 aa6.51□□□□□ -1.37
Usp42-201ENSMUST00000053287 Sprr2a1Q9CQK8 83 aa6.51□□□□□ -1.37
Usp42-201ENSMUST00000053287 Krtap1-5A2A590 122 aa6.46□□□□□ -1.38
Usp42-201ENSMUST00000053287 Mycbp2Q7TPH6 4711 aa6.35□□□□□ -1.39
Usp42-201ENSMUST00000053287 Gm10318A0A1W2P728 225 aa6.29□□□□□ -1.4
Usp42-201ENSMUST00000053287 Ryr3A2AGL3 4863 aa6.24□□□□□ -1.41
Usp42-201ENSMUST00000053287 Dnah8Q91XQ0 4731 aa6.2□□□□□ -1.42
Usp42-201ENSMUST00000053287 Crct1Q6PAI5 102 aa6.14□□□□□ -1.43
Usp42-201ENSMUST00000053287 Kmt2cQ8BRH4 4903 aa6.13□□□□□ -1.43
Usp42-201ENSMUST00000053287 Ryr2E9Q401 4966 aaKnown RBP6.09□□□□□ -1.43
Usp42-201ENSMUST00000053287 Krtap1-4Q3V2D6 188 aa6.05□□□□□ -1.44
Usp42-201ENSMUST00000053287 Krtap16-3Q8C1I6 86 aa5.93□□□□□ -1.46
Usp42-201ENSMUST00000053287 Ryr1E9PZQ0 5035 aa5.92□□□□□ -1.46
Usp42-201ENSMUST00000053287 Abca13Q5SSE9 5034 aa5.9□□□□□ -1.47
Usp42-201ENSMUST00000053287 Krtap19-9aF8WH65 55 aa5.81□□□□□ -1.48
Usp42-201ENSMUST00000053287 Krtap19-1Q925H2 87 aa5.78□□□□□ -1.48
Usp42-201ENSMUST00000053287 Krtap19-3Q925H6 87 aa5.77□□□□□ -1.49
Usp42-201ENSMUST00000053287 Dnhd1D3Z2X2 4750 aa5.74□□□□□ -1.49
Usp42-201ENSMUST00000053287 2310046K23RikA0A0A6YVW6 87 aa5.73□□□□□ -1.49
Usp42-201ENSMUST00000053287 Lrp2A2ARV4 4660 aa5.72□□□□□ -1.49
Usp42-201ENSMUST00000053287 Krtap12-1Q9Z287 130 aa5.7□□□□□ -1.5
Usp42-201ENSMUST00000053287 Krtap19-9bQ99NG9 58 aa5.67□□□□□ -1.5
Usp42-201ENSMUST00000053287 Krtap8-1O08633 61 aa5.65□□□□□ -1.51
Usp42-201ENSMUST00000053287 4933428G20RikQ9D3X4 101 aa5.63□□□□□ -1.51
Usp42-201ENSMUST00000053287 Birc6O88738 4882 aa5.63□□□□□ -1.51
Usp42-201ENSMUST00000053287 Herc1E9PZP8 4859 aa5.61□□□□□ -1.51
Usp42-201ENSMUST00000053287 Kiaa1109A2AAE1 5005 aa5.61□□□□□ -1.51
Usp42-201ENSMUST00000053287 Herc2Q4U2R1 4836 aa5.6□□□□□ -1.51
Usp42-201ENSMUST00000053287 Lce1jD3YUU5 139 aa5.55□□□□□ -1.52
Usp42-201ENSMUST00000053287 HydinQ80W93 5154 aa5.47□□□□□ -1.53
Usp42-201ENSMUST00000053287 LorP18165 486 aa5.42□□□□□ -1.54
Usp42-201ENSMUST00000053287 Hmcn2A2AJ76 5100 aa5.33□□□□□ -1.56
Usp42-201ENSMUST00000053287 Krtap1-3A2A588 173 aa5.24□□□□□ -1.57
Usp42-201ENSMUST00000053287 Lce1iQ9D6P5 149 aa5.19□□□□□ -1.58
Usp42-201ENSMUST00000053287 Krtap9-5A2A5X3 358 aa5.18□□□□□ -1.58
Usp42-201ENSMUST00000053287 Lce1a2Q9D1K4 149 aa5.17□□□□□ -1.58
Usp42-201ENSMUST00000053287 4932415D10RikA0A1W2P6U8 4986 aa5.16□□□□□ -1.58
Usp42-201ENSMUST00000053287 Krtap9-3Q3V2C1 136 aa5.16□□□□□ -1.58
Usp42-201ENSMUST00000053287 Lce1hQ9D6R3 140 aa5.15□□□□□ -1.58
Usp42-201ENSMUST00000053287 PcloQ9QYX7 5068 aa5.15□□□□□ -1.58
Usp42-201ENSMUST00000053287 Sprr2gO70558 76 aa5.13□□□□□ -1.59
Usp42-201ENSMUST00000053287 Krtap19-2Q925I0 141 aa5.12□□□□□ -1.59
Usp42-201ENSMUST00000053287 ZanO88799 5376 aa5.12□□□□□ -1.59
Usp42-201ENSMUST00000053287 Gm18596A0A1W2P860 280 aa5.09□□□□□ -1.59
Usp42-201ENSMUST00000053287 Krtap17-1A2A5X6 109 aa5.07□□□□□ -1.6
Usp42-201ENSMUST00000053287 Lce1dQ9D731 133 aa5.02□□□□□ -1.61
Usp42-201ENSMUST00000053287 Lce1mQ9CR91 182 aa5.01□□□□□ -1.61
Usp42-201ENSMUST00000053287 Mt2P02798 61 aa4.96□□□□□ -1.62
Usp42-201ENSMUST00000053287 Fat4Q2PZL6 4981 aa4.95□□□□□ -1.62
Usp42-201ENSMUST00000053287 Ubr4A2AN08 5180 aa4.95□□□□□ -1.62
Usp42-201ENSMUST00000053287 Gm10272F7CZ33 110 aa4.95□□□□□ -1.62
Usp42-201ENSMUST00000053287 Gm11938Q9D3H4 131 aa4.93□□□□□ -1.62
Usp42-201ENSMUST00000053287 Sprr2dO70555 85 aa4.9□□□□□ -1.63
Usp42-201ENSMUST00000053287 Gm6358A0A087WPH4 74 aa4.89□□□□□ -1.63
Usp42-201ENSMUST00000053287 Rnf213E9Q555 5152 aaKnown RBP4.88□□□□□ -1.63
Usp42-201ENSMUST00000053287 Gm10100J3QK64 120 aa4.86□□□□□ -1.63
Usp42-201ENSMUST00000053287 Lce1eQ9D139 143 aa4.84□□□□□ -1.64
Usp42-201ENSMUST00000053287 Gm9789Q8BIG3 52 aa4.83□□□□□ -1.64
Usp42-201ENSMUST00000053287 Ush2AQ2QI47 5193 aa4.79□□□□□ -1.64
Usp42-201ENSMUST00000053287 Gm10142J3KMP7 120 aa4.79□□□□□ -1.64
Usp42-201ENSMUST00000053287 Lce3bQ9CQM7 98 aa4.78□□□□□ -1.64
Usp42-201ENSMUST00000053287 Krtap22-2J3QNX6 67 aa4.76□□□□□ -1.65
Usp42-201ENSMUST00000053287 Prm1P02319 51 aa4.73□□□□□ -1.65
Usp42-201ENSMUST00000053287 Krtap19-4Q925H7 84 aa4.68□□□□□ -1.66
Usp42-201ENSMUST00000053287 SspoQ8CG65 4998 aa4.67□□□□□ -1.66
Usp42-201ENSMUST00000053287 Gm7735D3YX18 52 aa4.65□□□□□ -1.67
Usp42-201ENSMUST00000053287 Lce3cQ91V05 98 aa4.64□□□□□ -1.67
Usp42-201ENSMUST00000053287 Sprr2iO70560 76 aa4.61□□□□□ -1.67
Usp42-201ENSMUST00000053287 Lce1cQ9D1C5 147 aa4.59□□□□□ -1.67
Usp42-201ENSMUST00000053287 Lce3dE9Q8V1 98 aa4.59□□□□□ -1.68
Usp42-201ENSMUST00000053287 Muc5bE9Q5I3 4800 aa4.57□□□□□ -1.68
Usp42-201ENSMUST00000053287 Gm11562A0PK51 136 aa4.56□□□□□ -1.68
Usp42-201ENSMUST00000053287 Lce3eF8VQJ0 98 aa4.52□□□□□ -1.69
Usp42-201ENSMUST00000053287 Lce3fQ6PAI4 98 aa4.52□□□□□ -1.69
Usp42-201ENSMUST00000053287 Gm10061D3Z714 54 aa4.51□□□□□ -1.69
Usp42-201ENSMUST00000053287 Lce3aQ497I5 98 aa4.46□□□□□ -1.7
Usp42-201ENSMUST00000053287 Sprr2fO70557 76 aa4.45□□□□□ -1.7
Usp42-201ENSMUST00000053287 Lce1fB9EJP6 147 aa4.44□□□□□ -1.7
Usp42-201ENSMUST00000053287 Lce1a1Q9CQH5 143 aa4.44□□□□□ -1.7
Usp42-201ENSMUST00000053287 A0A1Y7VLE6 161 aa4.41□□□□□ -1.7
Usp42-201ENSMUST00000053287 Sprr2eO70556 76 aa4.39□□□□□ -1.71
Usp42-201ENSMUST00000053287 Sprr2kO70562 68 aa4.39□□□□□ -1.71
Usp42-201ENSMUST00000053287 Krtap31-1Q9D644 177 aa4.37□□□□□ -1.71
Usp42-201ENSMUST00000053287 Sprr2hO70559 108 aa4.32□□□□□ -1.72
Retrieved 100 of 22,080 RNA–protein pairs in 92.3 ms