RNA–Protein interactions for RNA: ENSMUST00000036992.8

Lmo1-201, Transcript of Rhombotin-1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Lmo1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo1-201ENSMUST00000036992 Krtap4-6Q3V4B7 195 aa8.9□□□□□ -0.98
Lmo1-201ENSMUST00000036992 Gm10160F6Y577 67 aa8.89□□□□□ -0.99
Lmo1-201ENSMUST00000036992 Defb1P56386 69 aa8.89□□□□□ -0.99
Lmo1-201ENSMUST00000036992 Gm45213A0A0U1RNZ6 101 aa8.82□□□□□ -1
Lmo1-201ENSMUST00000036992 4930518I15RikQ3V2W7 57 aa8.81□□□□□ -1
Lmo1-201ENSMUST00000036992 Mdn1A2ANY6 5589 aaKnown RBP8.79□□□□□ -1
Lmo1-201ENSMUST00000036992 Coa6Q8BGD8 79 aa8.76□□□□□ -1.01
Lmo1-201ENSMUST00000036992 Krtap4-1Q3UUY3 169 aa8.75□□□□□ -1.01
Lmo1-201ENSMUST00000036992 Cox6b2Q80ZN9 88 aa8.75□□□□□ -1.01
Lmo1-201ENSMUST00000036992 Pla2g10Q9QXX3 151 aa8.74□□□□□ -1.01
Lmo1-201ENSMUST00000036992 Atp5eP56382 52 aa8.72□□□□□ -1.01
Lmo1-201ENSMUST00000036992 Prm2P07978 107 aa8.71□□□□□ -1.02
Lmo1-201ENSMUST00000036992 Gm17606F6ZL36 78 aa8.7□□□□□ -1.02
Lmo1-201ENSMUST00000036992 Krtap19-9aF8WH65 55 aa8.67□□□□□ -1.02
Lmo1-201ENSMUST00000036992 Gm10643Q3URG9 111 aa8.66□□□□□ -1.02
Lmo1-201ENSMUST00000036992 BC029722A0A0N4SW31 51 aa8.65□□□□□ -1.02
Lmo1-201ENSMUST00000036992 B230307C23RikQ8BLB2 64 aa8.65□□□□□ -1.02
Lmo1-201ENSMUST00000036992 Gm6358A0A087WPH4 74 aa8.63□□□□□ -1.03
Lmo1-201ENSMUST00000036992 Serp2Q6TAW2 65 aa8.63□□□□□ -1.03
Lmo1-201ENSMUST00000036992 Gm10382Q3V0T5 144 aa8.59□□□□□ -1.03
Lmo1-201ENSMUST00000036992 Gm20537G3UYK7 97 aa8.58□□□□□ -1.04
Lmo1-201ENSMUST00000036992 Gm11564A2A4L9 201 aa8.55□□□□□ -1.04
Lmo1-201ENSMUST00000036992 Gm11563B1AQ90 168 aa8.55□□□□□ -1.04
Lmo1-201ENSMUST00000036992 Gm11595B1AQA7 289 aa8.55□□□□□ -1.04
Lmo1-201ENSMUST00000036992 Krtap4-8B1AQA8 209 aa8.55□□□□□ -1.04
Lmo1-201ENSMUST00000036992 SptssbQ925E8 76 aa8.54□□□□□ -1.04
Lmo1-201ENSMUST00000036992 CriptO70333 101 aa8.5□□□□□ -1.05
Lmo1-201ENSMUST00000036992 Spink7Q6IE32 76 aa8.49□□□□□ -1.05
Lmo1-201ENSMUST00000036992 Coa5Q99M07 74 aa8.49□□□□□ -1.05
Lmo1-201ENSMUST00000036992 Anapc13Q8R034 74 aa8.42□□□□□ -1.06
Lmo1-201ENSMUST00000036992 Lce1iQ9D6P5 149 aa8.4□□□□□ -1.06
Lmo1-201ENSMUST00000036992 Limd2Q8BGB5 128 aa8.33□□□□□ -1.08
Lmo1-201ENSMUST00000036992 Krtap4-9B1AQA9 244 aa8.29□□□□□ -1.08
Lmo1-201ENSMUST00000036992 Lce1a2Q9D1K4 149 aa8.26□□□□□ -1.09
Lmo1-201ENSMUST00000036992 Gm20661K7N787 53 aa8.2□□□□□ -1.1
Lmo1-201ENSMUST00000036992 Mt2P02798 61 aa8.2□□□□□ -1.1
Lmo1-201ENSMUST00000036992 Smim20D3Z7Q2 69 aa8.19□□□□□ -1.1
Lmo1-201ENSMUST00000036992 Mt4P47945 62 aa8.16□□□□□ -1.1
Lmo1-201ENSMUST00000036992 Fsip2A2ARZ3 6995 aa8.1□□□□□ -1.11
Lmo1-201ENSMUST00000036992 SnurfQ9WU12 71 aa8.06□□□□□ -1.12
Lmo1-201ENSMUST00000036992 Smlr1J3QMJ4 66 aa8.05□□□□□ -1.12
Lmo1-201ENSMUST00000036992 Krtap8-1O08633 61 aa8.04□□□□□ -1.12
Lmo1-201ENSMUST00000036992 Krtap9-3Q3V2C1 136 aa8.04□□□□□ -1.12
Lmo1-201ENSMUST00000036992 Sprr2a3Q4KL71 83 aa8.02□□□□□ -1.13
Lmo1-201ENSMUST00000036992 Sprr2a1Q9CQK8 83 aa8.02□□□□□ -1.13
Lmo1-201ENSMUST00000036992 Krtap4-7Q9D732 168 aa8.02□□□□□ -1.13
Lmo1-201ENSMUST00000036992 H2al1aQ5M8Q2 105 aa8.01□□□□□ -1.13
Lmo1-201ENSMUST00000036992 H2al1eQ810S6 105 aa8.01□□□□□ -1.13
Lmo1-201ENSMUST00000036992 Krtap4-13Q9D7P3 165 aa7.99□□□□□ -1.13
Lmo1-201ENSMUST00000036992 Pet100P0DJE0 76 aa7.96□□□□□ -1.14
Lmo1-201ENSMUST00000036992 Sec61gP60060 68 aa7.93□□□□□ -1.14
Lmo1-201ENSMUST00000036992 Serp1Q9Z1W5 66 aa7.93□□□□□ -1.14
Lmo1-201ENSMUST00000036992 Cdc42se1Q8BHL7 80 aa7.92□□□□□ -1.14
Lmo1-201ENSMUST00000036992 Gm9955Q8CEJ8 102 aa7.9□□□□□ -1.14
Lmo1-201ENSMUST00000036992 Krtap6-3A0A087WQL6 57 aa7.88□□□□□ -1.15
Lmo1-201ENSMUST00000036992 Uqcr11Q9CPX8 56 aa7.86□□□□□ -1.15
Lmo1-201ENSMUST00000036992 Gm17402F6Z0L5 76 aa7.85□□□□□ -1.15
Lmo1-201ENSMUST00000036992 Lce1bQ9D149 137 aa7.85□□□□□ -1.15
Lmo1-201ENSMUST00000036992 Gm10197F6QEY5 67 aa7.84□□□□□ -1.15
Lmo1-201ENSMUST00000036992 Tmem258P61166 79 aa7.8□□□□□ -1.16
Lmo1-201ENSMUST00000036992 H2al1bA0A087WP11 105 aa7.79□□□□□ -1.16
Lmo1-201ENSMUST00000036992 Krtap22-2J3QNX6 67 aa7.78□□□□□ -1.16
Lmo1-201ENSMUST00000036992 Sprr2kO70562 68 aa7.78□□□□□ -1.16
Lmo1-201ENSMUST00000036992 Phxr4P15974 95 aa7.78□□□□□ -1.16
Lmo1-201ENSMUST00000036992 Prr13Q9CQJ5 137 aa7.78□□□□□ -1.16
Lmo1-201ENSMUST00000036992 Gm38119A0A0A6YX29 146 aa7.73□□□□□ -1.17
Lmo1-201ENSMUST00000036992 Gm19668J3QMD1 248 aa7.73□□□□□ -1.17
Lmo1-201ENSMUST00000036992 2300003K06RikA2A4M0 262 aa7.68□□□□□ -1.18
Lmo1-201ENSMUST00000036992 Gm19935A0A1B0GSF9 52 aa7.67□□□□□ -1.18
Lmo1-201ENSMUST00000036992 Lce1lQ9D1G7 135 aa7.64□□□□□ -1.19
Lmo1-201ENSMUST00000036992 Brk1Q91VR8 75 aa7.58□□□□□ -1.2
Lmo1-201ENSMUST00000036992 Ndufb1P0DN34 57 aa7.57□□□□□ -1.2
Lmo1-201ENSMUST00000036992 Gm21887J3QQ04 176 aa7.44□□□□□ -1.22
Lmo1-201ENSMUST00000036992 Krtap19-9bQ99NG9 58 aa7.43□□□□□ -1.22
Lmo1-201ENSMUST00000036992 Camk2n1Q6QWF9 78 aa7.37□□□□□ -1.23
Lmo1-201ENSMUST00000036992 SmcpP15265 143 aa7.31□□□□□ -1.24
Lmo1-201ENSMUST00000036992 Sprr2gO70558 76 aa7.26□□□□□ -1.25
Lmo1-201ENSMUST00000036992 Lce1a1Q9CQH5 143 aa7.24□□□□□ -1.25
Lmo1-201ENSMUST00000036992 Gm3880A0A1B0GSB3 72 aa7.17□□□□□ -1.26
Lmo1-201ENSMUST00000036992 Krtap20-2E9Q0A8 60 aa7.17□□□□□ -1.26
Lmo1-201ENSMUST00000036992 Rps28P62858 69 aaKnown RBP7.12□□□□□ -1.27
Lmo1-201ENSMUST00000036992 Lce1hQ9D6R3 140 aa7.12□□□□□ -1.27
Lmo1-201ENSMUST00000036992 H2al1kJ3QP08 105 aa7.09□□□□□ -1.27
Lmo1-201ENSMUST00000036992 Lce1dQ9D731 133 aa7.03□□□□□ -1.28
Lmo1-201ENSMUST00000036992 H2al1mQ9DAD9 105 aa7.02□□□□□ -1.29
Lmo1-201ENSMUST00000036992 A0A1Y7VJH8 109 aa7.01□□□□□ -1.29
Lmo1-201ENSMUST00000036992 Lce1eQ9D139 143 aa6.99□□□□□ -1.29
Lmo1-201ENSMUST00000036992 2310046K23RikA0A0A6YVW6 87 aa6.98□□□□□ -1.29
Lmo1-201ENSMUST00000036992 Krtap5-2Q9D5Z7 189 aa6.83□□□□□ -1.32
Lmo1-201ENSMUST00000036992 Sprr2iO70560 76 aa6.8□□□□□ -1.32
Lmo1-201ENSMUST00000036992 Lce1kJ3QP15 125 aa6.79□□□□□ -1.32
Lmo1-201ENSMUST00000036992 Ndufs5Q99LY9 106 aa6.79□□□□□ -1.32
Lmo1-201ENSMUST00000036992 Gm12216A0A1W2P827 62 aa6.77□□□□□ -1.33
Lmo1-201ENSMUST00000036992 Syne1Q6ZWR6 8799 aa6.76□□□□□ -1.33
Lmo1-201ENSMUST00000036992 Krtap7-1Q9D3I6 87 aa6.75□□□□□ -1.33
Lmo1-201ENSMUST00000036992 4933415A04RikQ9D443 101 aa6.72□□□□□ -1.33
Lmo1-201ENSMUST00000036992 Eppk1Q8R0W0 6548 aa6.72□□□□□ -1.33
Lmo1-201ENSMUST00000036992 Gm10272F7CZ33 110 aa6.69□□□□□ -1.34
Lmo1-201ENSMUST00000036992 Gm11559Q9D3H7 191 aa6.68□□□□□ -1.34
Lmo1-201ENSMUST00000036992 Lce3bQ9CQM7 98 aa6.66□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 116.8 ms