RNA–Protein interactions for RNA: ENSMUST00000034131.9

Vps35-201, Transcript of Vacuolar protein sorting-associated protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps35, Length 3,474 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35-201ENSMUST00000034131 Gm9112A2AI92 75 aa6.59□□□□□ -1.35
Vps35-201ENSMUST00000034131 Gm17416Q30KP4 66 aa6.59□□□□□ -1.35
Vps35-201ENSMUST00000034131 Gm40193A0A1B0GT39 78 aa6.57□□□□□ -1.36
Vps35-201ENSMUST00000034131 Fat1A0A1L1SQU7 4645 aa6.55□□□□□ -1.36
Vps35-201ENSMUST00000034131 Pkhd1l1Q80ZA4 4249 aa6.54□□□□□ -1.36
Vps35-201ENSMUST00000034131 BC029722A0A0N4SW31 51 aa6.53□□□□□ -1.36
Vps35-201ENSMUST00000034131 Sec61bQ9CQS8 96 aaKnown RBP6.53□□□□□ -1.36
Vps35-201ENSMUST00000034131 2210017I01RikA0A0A6YVV1 95 aa6.52□□□□□ -1.37
Vps35-201ENSMUST00000034131 Gm19668J3QMD1 248 aa6.49□□□□□ -1.37
Vps35-201ENSMUST00000034131 Gm9736A0A1W2P7N1 277 aa6.49□□□□□ -1.37
Vps35-201ENSMUST00000034131 Fat3Q8BNA6 4555 aa6.49□□□□□ -1.37
Vps35-201ENSMUST00000034131 2310057N15RikQ9D6T8 200 aa6.4□□□□□ -1.38
Vps35-201ENSMUST00000034131 Herc2Q4U2R1 4836 aa6.39□□□□□ -1.39
Vps35-201ENSMUST00000034131 Kmt2cQ8BRH4 4903 aa6.37□□□□□ -1.39
Vps35-201ENSMUST00000034131 Gm17402F6Z0L5 76 aa6.37□□□□□ -1.39
Vps35-201ENSMUST00000034131 Dnah8Q91XQ0 4731 aa6.36□□□□□ -1.39
Vps35-201ENSMUST00000034131 Mycbp2Q7TPH6 4711 aa6.34□□□□□ -1.4
Vps35-201ENSMUST00000034131 Kiaa1109A2AAE1 5005 aa6.32□□□□□ -1.4
Vps35-201ENSMUST00000034131 Gm19402J3QJV4 266 aa6.31□□□□□ -1.4
Vps35-201ENSMUST00000034131 Birc6O88738 4882 aa6.29□□□□□ -1.4
Vps35-201ENSMUST00000034131 Krtap19-5O08632 62 aa6.29□□□□□ -1.4
Vps35-201ENSMUST00000034131 Krtap13-1Q8K198 168 aa6.26□□□□□ -1.41
Vps35-201ENSMUST00000034131 Abca13Q5SSE9 5034 aa6.24□□□□□ -1.41
Vps35-201ENSMUST00000034131 Spink7Q6IE32 76 aa6.22□□□□□ -1.41
Vps35-201ENSMUST00000034131 HydinQ80W93 5154 aa6.18□□□□□ -1.42
Vps35-201ENSMUST00000034131 Lce1mQ9CR91 182 aa6.17□□□□□ -1.42
Vps35-201ENSMUST00000034131 PcloQ9QYX7 5068 aa6.15□□□□□ -1.43
Vps35-201ENSMUST00000034131 Dnhd1D3Z2X2 4750 aa6.12□□□□□ -1.43
Vps35-201ENSMUST00000034131 Sprr2a3Q4KL71 83 aa6.12□□□□□ -1.43
Vps35-201ENSMUST00000034131 Camk2n1Q6QWF9 78 aa6.12□□□□□ -1.43
Vps35-201ENSMUST00000034131 Sprr2a1Q9CQK8 83 aa6.12□□□□□ -1.43
Vps35-201ENSMUST00000034131 Gm18596A0A1W2P860 280 aa6.03□□□□□ -1.44
Vps35-201ENSMUST00000034131 Krtap1-5A2A590 122 aa6.01□□□□□ -1.45
Vps35-201ENSMUST00000034131 Lrp2A2ARV4 4660 aa6.01□□□□□ -1.45
Vps35-201ENSMUST00000034131 Herc1E9PZP8 4859 aa6□□□□□ -1.45
Vps35-201ENSMUST00000034131 Tnp1P10856 55 aa5.88□□□□□ -1.47
Vps35-201ENSMUST00000034131 Gm10318A0A1W2P728 225 aa5.82□□□□□ -1.48
Vps35-201ENSMUST00000034131 Ush2AQ2QI47 5193 aa5.7□□□□□ -1.5
Vps35-201ENSMUST00000034131 Crct1Q6PAI5 102 aa5.7□□□□□ -1.5
Vps35-201ENSMUST00000034131 Prm1P02319 51 aa5.68□□□□□ -1.5
Vps35-201ENSMUST00000034131 Gm7735D3YX18 52 aa5.67□□□□□ -1.5
Vps35-201ENSMUST00000034131 Gm9789Q8BIG3 52 aa5.63□□□□□ -1.51
Vps35-201ENSMUST00000034131 Krtap16-3Q8C1I6 86 aa5.63□□□□□ -1.51
Vps35-201ENSMUST00000034131 Krtap1-4Q3V2D6 188 aa5.61□□□□□ -1.51
Vps35-201ENSMUST00000034131 4932415D10RikA0A1W2P6U8 4986 aa5.59□□□□□ -1.52
Vps35-201ENSMUST00000034131 Ubr4A2AN08 5180 aa5.58□□□□□ -1.52
Vps35-201ENSMUST00000034131 Hmcn2A2AJ76 5100 aa5.58□□□□□ -1.52
Vps35-201ENSMUST00000034131 Krtap19-1Q925H2 87 aa5.49□□□□□ -1.53
Vps35-201ENSMUST00000034131 2310046K23RikA0A0A6YVW6 87 aa5.44□□□□□ -1.54
Vps35-201ENSMUST00000034131 Krtap19-3Q925H6 87 aa5.44□□□□□ -1.54
Vps35-201ENSMUST00000034131 Krtap1-3A2A588 173 aa5.38□□□□□ -1.55
Vps35-201ENSMUST00000034131 Lce1jD3YUU5 139 aa5.33□□□□□ -1.56
Vps35-201ENSMUST00000034131 Krtap19-9aF8WH65 55 aa5.31□□□□□ -1.56
Vps35-201ENSMUST00000034131 LorP18165 486 aa5.31□□□□□ -1.56
Vps35-201ENSMUST00000034131 ZanO88799 5376 aa5.3□□□□□ -1.56
Vps35-201ENSMUST00000034131 Krtap8-1O08633 61 aa5.28□□□□□ -1.56
Vps35-201ENSMUST00000034131 Krtap12-1Q9Z287 130 aa5.27□□□□□ -1.57
Vps35-201ENSMUST00000034131 Fat4Q2PZL6 4981 aa5.26□□□□□ -1.57
Vps35-201ENSMUST00000034131 Krtap19-9bQ99NG9 58 aa5.21□□□□□ -1.58
Vps35-201ENSMUST00000034131 Krtap31-1Q9D644 177 aa5.11□□□□□ -1.59
Vps35-201ENSMUST00000034131 Krtap9-3Q3V2C1 136 aa5.1□□□□□ -1.59
Vps35-201ENSMUST00000034131 Rnf213E9Q555 5152 aaKnown RBP5.09□□□□□ -1.59
Vps35-201ENSMUST00000034131 Gm10061D3Z714 54 aa5.03□□□□□ -1.6
Vps35-201ENSMUST00000034131 4933428G20RikQ9D3X4 101 aa5.02□□□□□ -1.61
Vps35-201ENSMUST00000034131 Lce1hQ9D6R3 140 aa5.02□□□□□ -1.61
Vps35-201ENSMUST00000034131 Lce1dQ9D731 133 aa4.98□□□□□ -1.61
Vps35-201ENSMUST00000034131 Lce1iQ9D6P5 149 aa4.98□□□□□ -1.61
Vps35-201ENSMUST00000034131 Krtap17-1A2A5X6 109 aa4.96□□□□□ -1.61
Vps35-201ENSMUST00000034131 Lce1a2Q9D1K4 149 aa4.96□□□□□ -1.62
Vps35-201ENSMUST00000034131 Gm11569B1AQB1 180 aa4.91□□□□□ -1.62
Vps35-201ENSMUST00000034131 SspoQ8CG65 4998 aa4.89□□□□□ -1.63
Vps35-201ENSMUST00000034131 Sprr2gO70558 76 aa4.85□□□□□ -1.63
Vps35-201ENSMUST00000034131 Krtap31-2Q8CAY5 177 aa4.81□□□□□ -1.64
Vps35-201ENSMUST00000034131 Krtap19-2Q925I0 141 aa4.79□□□□□ -1.64
Vps35-201ENSMUST00000034131 Gm11938Q9D3H4 131 aa4.79□□□□□ -1.64
Vps35-201ENSMUST00000034131 Krtap9-5A2A5X3 358 aa4.78□□□□□ -1.64
Vps35-201ENSMUST00000034131 Krtap4-2B1AQ85 167 aa4.77□□□□□ -1.65
Vps35-201ENSMUST00000034131 Lce1eQ9D139 143 aa4.77□□□□□ -1.65
Vps35-201ENSMUST00000034131 Gm11562A0PK51 136 aa4.71□□□□□ -1.66
Vps35-201ENSMUST00000034131 Lce1gQ9D195 139 aa4.7□□□□□ -1.66
Vps35-201ENSMUST00000034131 Sprr2dO70555 85 aa4.67□□□□□ -1.66
Vps35-201ENSMUST00000034131 Mdn1A2ANY6 5589 aaKnown RBP4.6□□□□□ -1.67
Vps35-201ENSMUST00000034131 Mt2P02798 61 aa4.59□□□□□ -1.67
Vps35-201ENSMUST00000034131 Muc5bE9Q5I3 4800 aa4.58□□□□□ -1.68
Vps35-201ENSMUST00000034131 Syne2Q6ZWQ0 6874 aaKnown RBP4.54□□□□□ -1.68
Vps35-201ENSMUST00000034131 Gm10272F7CZ33 110 aa4.54□□□□□ -1.68
Vps35-201ENSMUST00000034131 Krtap4-6Q3V4B7 195 aa4.54□□□□□ -1.68
Vps35-201ENSMUST00000034131 Gm11596B1AQB0 205 aa4.53□□□□□ -1.68
Vps35-201ENSMUST00000034131 Gm11555B1AQ89 175 aa4.52□□□□□ -1.69
Vps35-201ENSMUST00000034131 Gm10100J3QK64 120 aa4.5□□□□□ -1.69
Vps35-201ENSMUST00000034131 Lce1cQ9D1C5 147 aa4.48□□□□□ -1.69
Vps35-201ENSMUST00000034131 Gm6358A0A087WPH4 74 aa4.47□□□□□ -1.69
Vps35-201ENSMUST00000034131 Krtap4-1Q3UUY3 169 aa4.45□□□□□ -1.7
Vps35-201ENSMUST00000034131 Sprr2iO70560 76 aa4.42□□□□□ -1.7
Vps35-201ENSMUST00000034131 Gm10142J3KMP7 120 aa4.41□□□□□ -1.7
Vps35-201ENSMUST00000034131 Krtap22-2J3QNX6 67 aa4.4□□□□□ -1.71
Vps35-201ENSMUST00000034131 Lce3bQ9CQM7 98 aa4.38□□□□□ -1.71
Vps35-201ENSMUST00000034131 Gm11564A2A4L9 201 aa4.34□□□□□ -1.72
Vps35-201ENSMUST00000034131 Gm11563B1AQ90 168 aa4.34□□□□□ -1.72
Vps35-201ENSMUST00000034131 Gm11595B1AQA7 289 aa4.34□□□□□ -1.72
Retrieved 100 of 22,080 RNA–protein pairs in 8.2 ms