RNA–Protein interactions for RNA: ENSMUST00000028522.9

Itga6-201, Transcript of Integrin alpha-6, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Itga6, Length 4,310 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Itga6-201ENSMUST00000028522 Mycbp2Q7TPH6 4711 aa7.66□□□□□ -1.18
Itga6-201ENSMUST00000028522 Gm17402F6Z0L5 76 aa7.64□□□□□ -1.19
Itga6-201ENSMUST00000028522 Hectd4E9Q2E4 4418 aa7.63□□□□□ -1.19
Itga6-201ENSMUST00000028522 Dnah7cA0A087WR13 4024 aa7.63□□□□□ -1.19
Itga6-201ENSMUST00000028522 Lrp1Q91ZX7 4545 aaKnown RBP7.62□□□□□ -1.19
Itga6-201ENSMUST00000028522 Fras1Q80T14 4010 aa7.6□□□□□ -1.19
Itga6-201ENSMUST00000028522 Tnp1P10856 55 aa7.57□□□□□ -1.2
Itga6-201ENSMUST00000028522 SacsQ9JLC8 4582 aa7.56□□□□□ -1.2
Itga6-201ENSMUST00000028522 Fat1A0A1L1SQU7 4645 aa7.53□□□□□ -1.2
Itga6-201ENSMUST00000028522 Dnah7aE9Q0T8 4024 aa7.52□□□□□ -1.21
Itga6-201ENSMUST00000028522 Fat3Q8BNA6 4555 aa7.5□□□□□ -1.21
Itga6-201ENSMUST00000028522 HydinQ80W93 5154 aa7.44□□□□□ -1.22
Itga6-201ENSMUST00000028522 Kiaa1109A2AAE1 5005 aa7.4□□□□□ -1.22
Itga6-201ENSMUST00000028522 Vps13bQ80TY5 3993 aa7.39□□□□□ -1.23
Itga6-201ENSMUST00000028522 Gm19668J3QMD1 248 aa7.35□□□□□ -1.23
Itga6-201ENSMUST00000028522 Herc2Q4U2R1 4836 aa7.33□□□□□ -1.24
Itga6-201ENSMUST00000028522 Pkd1O08852 4293 aa7.32□□□□□ -1.24
Itga6-201ENSMUST00000028522 Krtap1-5A2A590 122 aa7.31□□□□□ -1.24
Itga6-201ENSMUST00000028522 Gm9112A2AI92 75 aa7.31□□□□□ -1.24
Itga6-201ENSMUST00000028522 Lrp2A2ARV4 4660 aa7.29□□□□□ -1.24
Itga6-201ENSMUST00000028522 Prm2P07978 107 aa7.24□□□□□ -1.25
Itga6-201ENSMUST00000028522 Fat2Q5F226 4351 aa7.17□□□□□ -1.26
Itga6-201ENSMUST00000028522 Sprr2a3Q4KL71 83 aa7.15□□□□□ -1.26
Itga6-201ENSMUST00000028522 Sprr2a1Q9CQK8 83 aa7.15□□□□□ -1.26
Itga6-201ENSMUST00000028522 Gm19402J3QJV4 266 aa7.14□□□□□ -1.27
Itga6-201ENSMUST00000028522 Ryr2E9Q401 4966 aaKnown RBP7.14□□□□□ -1.27
Itga6-201ENSMUST00000028522 Dnah8Q91XQ0 4731 aa7.1□□□□□ -1.27
Itga6-201ENSMUST00000028522 LorP18165 486 aa7.08□□□□□ -1.28
Itga6-201ENSMUST00000028522 Krtap1-4Q3V2D6 188 aa7.06□□□□□ -1.28
Itga6-201ENSMUST00000028522 Krtap7-1Q9D3I6 87 aa7.03□□□□□ -1.28
Itga6-201ENSMUST00000028522 Abca13Q5SSE9 5034 aa7.01□□□□□ -1.29
Itga6-201ENSMUST00000028522 Gm18596A0A1W2P860 280 aa6.99□□□□□ -1.29
Itga6-201ENSMUST00000028522 Krtap16-3Q8C1I6 86 aa6.93□□□□□ -1.3
Itga6-201ENSMUST00000028522 Krtap19-9aF8WH65 55 aa6.91□□□□□ -1.3
Itga6-201ENSMUST00000028522 Krtap19-3Q925H6 87 aa6.85□□□□□ -1.31
Itga6-201ENSMUST00000028522 Dnhd1D3Z2X2 4750 aa6.85□□□□□ -1.31
Itga6-201ENSMUST00000028522 Krtap12-1Q9Z287 130 aa6.83□□□□□ -1.32
Itga6-201ENSMUST00000028522 Kmt2cQ8BRH4 4903 aa6.83□□□□□ -1.32
Itga6-201ENSMUST00000028522 Pkhd1l1Q80ZA4 4249 aa6.82□□□□□ -1.32
Itga6-201ENSMUST00000028522 Krtap19-1Q925H2 87 aa6.79□□□□□ -1.32
Itga6-201ENSMUST00000028522 Lce1mQ9CR91 182 aa6.79□□□□□ -1.32
Itga6-201ENSMUST00000028522 Birc6O88738 4882 aa6.68□□□□□ -1.34
Itga6-201ENSMUST00000028522 Pkhd1E9PZ36 4059 aa6.65□□□□□ -1.34
Itga6-201ENSMUST00000028522 PcloQ9QYX7 5068 aa6.62□□□□□ -1.35
Itga6-201ENSMUST00000028522 Krtap19-9bQ99NG9 58 aa6.58□□□□□ -1.36
Itga6-201ENSMUST00000028522 Krtap1-3A2A588 173 aa6.45□□□□□ -1.38
Itga6-201ENSMUST00000028522 Herc1E9PZP8 4859 aa6.45□□□□□ -1.38
Itga6-201ENSMUST00000028522 Krtap9-5A2A5X3 358 aa6.45□□□□□ -1.38
Itga6-201ENSMUST00000028522 4933428G20RikQ9D3X4 101 aa6.44□□□□□ -1.38
Itga6-201ENSMUST00000028522 Lce1jD3YUU5 139 aa6.41□□□□□ -1.38
Itga6-201ENSMUST00000028522 Gm6358A0A087WPH4 74 aa6.39□□□□□ -1.39
Itga6-201ENSMUST00000028522 Ubr4A2AN08 5180 aa6.39□□□□□ -1.39
Itga6-201ENSMUST00000028522 Krtap8-1O08633 61 aa6.37□□□□□ -1.39
Itga6-201ENSMUST00000028522 Prm1P02319 51 aa6.36□□□□□ -1.39
Itga6-201ENSMUST00000028522 Gm7735D3YX18 52 aa6.28□□□□□ -1.4
Itga6-201ENSMUST00000028522 4932415D10RikA0A1W2P6U8 4986 aa6.26□□□□□ -1.41
Itga6-201ENSMUST00000028522 Gm9789Q8BIG3 52 aa6.23□□□□□ -1.41
Itga6-201ENSMUST00000028522 Krtap19-2Q925I0 141 aa6.23□□□□□ -1.41
Itga6-201ENSMUST00000028522 Mdn1A2ANY6 5589 aaKnown RBP6.21□□□□□ -1.42
Itga6-201ENSMUST00000028522 ZanO88799 5376 aa6.16□□□□□ -1.42
Itga6-201ENSMUST00000028522 Ush2AQ2QI47 5193 aa6.13□□□□□ -1.43
Itga6-201ENSMUST00000028522 Fat4Q2PZL6 4981 aa6.12□□□□□ -1.43
Itga6-201ENSMUST00000028522 Mt2P02798 61 aa6.1□□□□□ -1.43
Itga6-201ENSMUST00000028522 2310046K23RikA0A0A6YVW6 87 aa5.98□□□□□ -1.45
Itga6-201ENSMUST00000028522 Rnf213E9Q555 5152 aaKnown RBP5.96□□□□□ -1.45
Itga6-201ENSMUST00000028522 Hmcn2A2AJ76 5100 aa5.95□□□□□ -1.46
Itga6-201ENSMUST00000028522 Gm10061D3Z714 54 aa5.93□□□□□ -1.46
Itga6-201ENSMUST00000028522 Lce1iQ9D6P5 149 aa5.92□□□□□ -1.46
Itga6-201ENSMUST00000028522 Krtap17-1A2A5X6 109 aa5.9□□□□□ -1.46
Itga6-201ENSMUST00000028522 Gm10272F7CZ33 110 aa5.9□□□□□ -1.47
Itga6-201ENSMUST00000028522 Krtap22-2J3QNX6 67 aa5.9□□□□□ -1.47
Itga6-201ENSMUST00000028522 Lce1a2Q9D1K4 149 aa5.85□□□□□ -1.47
Itga6-201ENSMUST00000028522 Sprr2kO70562 68 aa5.84□□□□□ -1.47
Itga6-201ENSMUST00000028522 Gm11569B1AQB1 180 aa5.68□□□□□ -1.5
Itga6-201ENSMUST00000028522 Lce3bQ9CQM7 98 aa5.66□□□□□ -1.5
Itga6-201ENSMUST00000028522 Gm10100J3QK64 120 aa5.66□□□□□ -1.5
Itga6-201ENSMUST00000028522 Krtap9-3Q3V2C1 136 aa5.62□□□□□ -1.51
Itga6-201ENSMUST00000028522 Lce1hQ9D6R3 140 aa5.57□□□□□ -1.52
Itga6-201ENSMUST00000028522 Lce3cQ91V05 98 aa5.56□□□□□ -1.52
Itga6-201ENSMUST00000028522 Syne1Q6ZWR6 8799 aa5.56□□□□□ -1.52
Itga6-201ENSMUST00000028522 Gm38119A0A0A6YX29 146 aa5.54□□□□□ -1.52
Itga6-201ENSMUST00000028522 Gm10142J3KMP7 120 aa5.46□□□□□ -1.54
Itga6-201ENSMUST00000028522 Lce3eF8VQJ0 98 aa5.44□□□□□ -1.54
Itga6-201ENSMUST00000028522 Lce3fQ6PAI4 98 aa5.44□□□□□ -1.54
Itga6-201ENSMUST00000028522 Sprr2gO70558 76 aa5.42□□□□□ -1.54
Itga6-201ENSMUST00000028522 Muc5bE9Q5I3 4800 aa5.37□□□□□ -1.55
Itga6-201ENSMUST00000028522 Krtap4-6Q3V4B7 195 aa5.35□□□□□ -1.55
Itga6-201ENSMUST00000028522 Fsip2A2ARZ3 6995 aa5.31□□□□□ -1.56
Itga6-201ENSMUST00000028522 Lce3dE9Q8V1 98 aa5.3□□□□□ -1.56
Itga6-201ENSMUST00000028522 SspoQ8CG65 4998 aa5.26□□□□□ -1.57
Itga6-201ENSMUST00000028522 Mt4P47945 62 aa5.24□□□□□ -1.57
Itga6-201ENSMUST00000028522 Lce3aQ497I5 98 aa5.23□□□□□ -1.57
Itga6-201ENSMUST00000028522 Krtap4-2B1AQ85 167 aa5.2□□□□□ -1.58
Itga6-201ENSMUST00000028522 Lce1bQ9D149 137 aa5.18□□□□□ -1.58
Itga6-201ENSMUST00000028522 Muc16A0A140LJ72 8478 aa5.18□□□□□ -1.58
Itga6-201ENSMUST00000028522 Lce1fB9EJP6 147 aa5.16□□□□□ -1.58
Itga6-201ENSMUST00000028522 Lce1cQ9D1C5 147 aa5.16□□□□□ -1.58
Itga6-201ENSMUST00000028522 Lce1lQ9D1G7 135 aa5.16□□□□□ -1.58
Itga6-201ENSMUST00000028522 Lce1dQ9D731 133 aa5.16□□□□□ -1.58
Itga6-201ENSMUST00000028522 Sprr2iO70560 76 aa5.16□□□□□ -1.58
Retrieved 100 of 22,080 RNA–protein pairs in 169.3 ms