RNA–Protein interactions for RNA: ENSMUST00000026045.13

Col17a1-201, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Col17a1, Length 5,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-201ENSMUST00000026045 Dnah2P0C6F1 4456 aa7,09□□□□□ -1,27
Col17a1-201ENSMUST00000026045 Dnah3Q8BW94 4083 aa7,07□□□□□ -1,28
Col17a1-201ENSMUST00000026045 Dync1h1Q9JHU4 4644 aaKnown RBP7,06□□□□□ -1,28
Col17a1-201ENSMUST00000026045 PrkdcP97313 4128 aa7,04□□□□□ -1,28
Col17a1-201ENSMUST00000026045 Lrp1bQ9JI18 4599 aa7,02□□□□□ -1,28
Col17a1-201ENSMUST00000026045 Dnah6E9Q0B6 4144 aa7,02□□□□□ -1,29
Col17a1-201ENSMUST00000026045 Kmt2aP55200 3966 aa7,02□□□□□ -1,29
Col17a1-201ENSMUST00000026045 Gm19402J3QJV4 266 aa7,01□□□□□ -1,29
Col17a1-201ENSMUST00000026045 Krtap1-4Q3V2D6 188 aa6,96□□□□□ -1,29
Col17a1-201ENSMUST00000026045 Dnah1E9Q8T7 4250 aa6,94□□□□□ -1,3
Col17a1-201ENSMUST00000026045 SacsQ9JLC8 4582 aa6,94□□□□□ -1,3
Col17a1-201ENSMUST00000026045 Krtap19-9aF8WH65 55 aa6,92□□□□□ -1,3
Col17a1-201ENSMUST00000026045 LorP18165 486 aa6,91□□□□□ -1,3
Col17a1-201ENSMUST00000026045 Mycbp2Q7TPH6 4711 aa6,85□□□□□ -1,31
Col17a1-201ENSMUST00000026045 Gm18596A0A1W2P860 280 aa6,83□□□□□ -1,32
Col17a1-201ENSMUST00000026045 Ryr1E9PZQ0 5035 aa6,81□□□□□ -1,32
Col17a1-201ENSMUST00000026045 Hectd4E9Q2E4 4418 aa6,8□□□□□ -1,32
Col17a1-201ENSMUST00000026045 Pkd1O08852 4293 aa6,77□□□□□ -1,33
Col17a1-201ENSMUST00000026045 Gm6358A0A087WPH4 74 aa6,73□□□□□ -1,33
Col17a1-201ENSMUST00000026045 Krtap12-1Q9Z287 130 aa6,73□□□□□ -1,33
Col17a1-201ENSMUST00000026045 Ryr3A2AGL3 4863 aa6,71□□□□□ -1,34
Col17a1-201ENSMUST00000026045 Krtap19-9bQ99NG9 58 aa6,7□□□□□ -1,34
Col17a1-201ENSMUST00000026045 Fat1A0A1L1SQU7 4645 aa6,68□□□□□ -1,34
Col17a1-201ENSMUST00000026045 Lrp1Q91ZX7 4545 aaKnown RBP6,66□□□□□ -1,34
Col17a1-201ENSMUST00000026045 Fat3Q8BNA6 4555 aa6,63□□□□□ -1,35
Col17a1-201ENSMUST00000026045 Dnah7cA0A087WR13 4024 aa6,61□□□□□ -1,35
Col17a1-201ENSMUST00000026045 Krtap16-3Q8C1I6 86 aa6,58□□□□□ -1,36
Col17a1-201ENSMUST00000026045 Krtap8-1O08633 61 aa6,56□□□□□ -1,36
Col17a1-201ENSMUST00000026045 Krtap19-3Q925H6 87 aa6,52□□□□□ -1,37
Col17a1-201ENSMUST00000026045 Dnah7aE9Q0T8 4024 aa6,52□□□□□ -1,37
Col17a1-201ENSMUST00000026045 Dnah8Q91XQ0 4731 aa6,51□□□□□ -1,37
Col17a1-201ENSMUST00000026045 Vps13bQ80TY5 3993 aa6,51□□□□□ -1,37
Col17a1-201ENSMUST00000026045 Lce1mQ9CR91 182 aa6,48□□□□□ -1,37
Col17a1-201ENSMUST00000026045 Fat2Q5F226 4351 aa6,46□□□□□ -1,37
Col17a1-201ENSMUST00000026045 Fras1Q80T14 4010 aa6,44□□□□□ -1,38
Col17a1-201ENSMUST00000026045 Krtap19-1Q925H2 87 aa6,42□□□□□ -1,38
Col17a1-201ENSMUST00000026045 Herc2Q4U2R1 4836 aa6,41□□□□□ -1,38
Col17a1-201ENSMUST00000026045 Kiaa1109A2AAE1 5005 aa6,41□□□□□ -1,38
Col17a1-201ENSMUST00000026045 HydinQ80W93 5154 aa6,41□□□□□ -1,38
Col17a1-201ENSMUST00000026045 Ryr2E9Q401 4966 aaKnown RBP6,4□□□□□ -1,38
Col17a1-201ENSMUST00000026045 2310046K23RikA0A0A6YVW6 87 aa6,39□□□□□ -1,39
Col17a1-201ENSMUST00000026045 Lrp2A2ARV4 4660 aa6,38□□□□□ -1,39
Col17a1-201ENSMUST00000026045 Krtap9-5A2A5X3 358 aa6,31□□□□□ -1,4
Col17a1-201ENSMUST00000026045 Gm10100J3QK64 120 aa6,24□□□□□ -1,41
Col17a1-201ENSMUST00000026045 Sprr2kO70562 68 aa6,14□□□□□ -1,43
Col17a1-201ENSMUST00000026045 Gm10272F7CZ33 110 aa6,13□□□□□ -1,43
Col17a1-201ENSMUST00000026045 Prm1P02319 51 aa6,1□□□□□ -1,43
Col17a1-201ENSMUST00000026045 Gm10142J3KMP7 120 aa6,1□□□□□ -1,43
Col17a1-201ENSMUST00000026045 Kmt2cQ8BRH4 4903 aa6,09□□□□□ -1,43
Col17a1-201ENSMUST00000026045 Krtap1-3A2A588 173 aa6,07□□□□□ -1,44
Col17a1-201ENSMUST00000026045 Lce1jD3YUU5 139 aa6,05□□□□□ -1,44
Col17a1-201ENSMUST00000026045 Lce3bQ9CQM7 98 aa6,01□□□□□ -1,45
Col17a1-201ENSMUST00000026045 Dnhd1D3Z2X2 4750 aa6□□□□□ -1,45
Col17a1-201ENSMUST00000026045 Krtap19-2Q925I0 141 aa5,98□□□□□ -1,45
Col17a1-201ENSMUST00000026045 Mt2P02798 61 aa5,97□□□□□ -1,45
Col17a1-201ENSMUST00000026045 Gm7735D3YX18 52 aa5,94□□□□□ -1,46
Col17a1-201ENSMUST00000026045 Pkhd1E9PZ36 4059 aa5,93□□□□□ -1,46
Col17a1-201ENSMUST00000026045 PcloQ9QYX7 5068 aa5,93□□□□□ -1,46
Col17a1-201ENSMUST00000026045 Abca13Q5SSE9 5034 aa5,92□□□□□ -1,46
Col17a1-201ENSMUST00000026045 Lce3cQ91V05 98 aa5,91□□□□□ -1,46
Col17a1-201ENSMUST00000026045 Birc6O88738 4882 aa5,91□□□□□ -1,46
Col17a1-201ENSMUST00000026045 Pkhd1l1Q80ZA4 4249 aa5,9□□□□□ -1,46
Col17a1-201ENSMUST00000026045 Gm9789Q8BIG3 52 aa5,88□□□□□ -1,47
Col17a1-201ENSMUST00000026045 Krtap22-2J3QNX6 67 aa5,85□□□□□ -1,47
Col17a1-201ENSMUST00000026045 Herc1E9PZP8 4859 aa5,78□□□□□ -1,48
Col17a1-201ENSMUST00000026045 Lce3dE9Q8V1 98 aa5,77□□□□□ -1,49
Col17a1-201ENSMUST00000026045 Sprr2gO70558 76 aa5,74□□□□□ -1,49
Col17a1-201ENSMUST00000026045 Lce3eF8VQJ0 98 aa5,74□□□□□ -1,49
Col17a1-201ENSMUST00000026045 Lce3fQ6PAI4 98 aa5,74□□□□□ -1,49
Col17a1-201ENSMUST00000026045 Krtap9-3Q3V2C1 136 aa5,68□□□□□ -1,5
Col17a1-201ENSMUST00000026045 Lce3aQ497I5 98 aa5,68□□□□□ -1,5
Col17a1-201ENSMUST00000026045 Gm10061D3Z714 54 aa5,66□□□□□ -1,5
Col17a1-201ENSMUST00000026045 Gm38119A0A0A6YX29 146 aa5,6□□□□□ -1,51
Col17a1-201ENSMUST00000026045 Lce1iQ9D6P5 149 aa5,58□□□□□ -1,52
Col17a1-201ENSMUST00000026045 Lce1a2Q9D1K4 149 aa5,51□□□□□ -1,53
Col17a1-201ENSMUST00000026045 Syne1Q6ZWR6 8799 aa5,49□□□□□ -1,53
Col17a1-201ENSMUST00000026045 Gm11569B1AQB1 180 aa5,49□□□□□ -1,53
Col17a1-201ENSMUST00000026045 Mdn1A2ANY6 5589 aaKnown RBP5,48□□□□□ -1,53
Col17a1-201ENSMUST00000026045 4932415D10RikA0A1W2P6U8 4986 aa5,46□□□□□ -1,54
Col17a1-201ENSMUST00000026045 Ubr4A2AN08 5180 aa5,46□□□□□ -1,54
Col17a1-201ENSMUST00000026045 Krtap19-4Q925H7 84 aa5,44□□□□□ -1,54
Col17a1-201ENSMUST00000026045 Krtap31-1Q9D644 177 aa5,43□□□□□ -1,54
Col17a1-201ENSMUST00000026045 Gm10024A0A0A0MQA4 119 aa5,42□□□□□ -1,54
Col17a1-201ENSMUST00000026045 Fat4Q2PZL6 4981 aa5,41□□□□□ -1,54
Col17a1-201ENSMUST00000026045 Sprr2iO70560 76 aa5,39□□□□□ -1,55
Col17a1-201ENSMUST00000026045 Krtap17-1A2A5X6 109 aa5,38□□□□□ -1,55
Col17a1-201ENSMUST00000026045 ZanO88799 5376 aa5,36□□□□□ -1,55
Col17a1-201ENSMUST00000026045 Lce1gQ9D195 139 aa5,33□□□□□ -1,56
Col17a1-201ENSMUST00000026045 Lce1hQ9D6R3 140 aa5,33□□□□□ -1,56
Col17a1-201ENSMUST00000026045 Sprr2fO70557 76 aa5,31□□□□□ -1,56
Col17a1-201ENSMUST00000026045 Lce1fB9EJP6 147 aa5,28□□□□□ -1,56
Col17a1-201ENSMUST00000026045 Lce1cQ9D1C5 147 aa5,28□□□□□ -1,56
Col17a1-201ENSMUST00000026045 Lce1lQ9D1G7 135 aa5,28□□□□□ -1,56
Col17a1-201ENSMUST00000026045 Lce1dQ9D731 133 aa5,28□□□□□ -1,56
Col17a1-201ENSMUST00000026045 Hmcn2A2AJ76 5100 aa5,28□□□□□ -1,56
Col17a1-201ENSMUST00000026045 Lce1bQ9D149 137 aa5,27□□□□□ -1,57
Col17a1-201ENSMUST00000026045 Ush2AQ2QI47 5193 aa5,24□□□□□ -1,57
Col17a1-201ENSMUST00000026045 Lce1eQ9D139 143 aa5,19□□□□□ -1,58
Col17a1-201ENSMUST00000026045 Gm11938Q9D3H4 131 aa5,18□□□□□ -1,58
Col17a1-201ENSMUST00000026045 Krtap31-2Q8CAY5 177 aa5,17□□□□□ -1,58
Retrieved 100 of 22,080 RNA–protein pairs in 49,7 ms