RNA–Protein interactions for RNA: ENSMUST00000022327.12

Ldb3-201, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ldb3, Length 5,119 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-201ENSMUST00000022327 Dync1h1Q9JHU4 4644 aaKnown RBP4.93□□□□□ -1.62
Ldb3-201ENSMUST00000022327 Dnah11E9Q7N9 4488 aa4.93□□□□□ -1.62
Ldb3-201ENSMUST00000022327 Dnah9B1AR51 4484 aa4.9□□□□□ -1.63
Ldb3-201ENSMUST00000022327 ApobE9Q414 4505 aa4.88□□□□□ -1.63
Ldb3-201ENSMUST00000022327 TnxbO35452 4006 aa4.87□□□□□ -1.63
Ldb3-201ENSMUST00000022327 SacsQ9JLC8 4582 aa4.86□□□□□ -1.63
Ldb3-201ENSMUST00000022327 CubnQ9JLB4 3623 aa4.84□□□□□ -1.63
Ldb3-201ENSMUST00000022327 Dnah1E9Q8T7 4250 aa4.82□□□□□ -1.64
Ldb3-201ENSMUST00000022327 PrkdcP97313 4128 aa4.81□□□□□ -1.64
Ldb3-201ENSMUST00000022327 Dnah3Q8BW94 4083 aa4.81□□□□□ -1.64
Ldb3-201ENSMUST00000022327 BsnO88737 3942 aa4.8□□□□□ -1.64
Ldb3-201ENSMUST00000022327 Xirp2Q4U4S6 3784 aa4.8□□□□□ -1.64
Ldb3-201ENSMUST00000022327 Lrp1bQ9JI18 4599 aa4.77□□□□□ -1.65
Ldb3-201ENSMUST00000022327 Pkd1O08852 4293 aa4.77□□□□□ -1.65
Ldb3-201ENSMUST00000022327 Csmd3Q80T79 3707 aa4.77□□□□□ -1.65
Ldb3-201ENSMUST00000022327 Fat1A0A1L1SQU7 4645 aa4.76□□□□□ -1.65
Ldb3-201ENSMUST00000022327 Krtap16-3Q8C1I6 86 aa4.75□□□□□ -1.65
Ldb3-201ENSMUST00000022327 Hspg2Q05793 3707 aaKnown RBP4.75□□□□□ -1.65
Ldb3-201ENSMUST00000022327 Sprr2kO70562 68 aa4.74□□□□□ -1.65
Ldb3-201ENSMUST00000022327 Krtap19-3Q925H6 87 aa4.73□□□□□ -1.65
Ldb3-201ENSMUST00000022327 Ryr1E9PZQ0 5035 aa4.73□□□□□ -1.65
Ldb3-201ENSMUST00000022327 Dnah8Q91XQ0 4731 aa4.72□□□□□ -1.65
Ldb3-201ENSMUST00000022327 Mycbp2Q7TPH6 4711 aa4.72□□□□□ -1.65
Ldb3-201ENSMUST00000022327 Dnah7bL7N1Y0 4068 aa4.72□□□□□ -1.65
Ldb3-201ENSMUST00000022327 Lce1mQ9CR91 182 aa4.71□□□□□ -1.66
Ldb3-201ENSMUST00000022327 A0A1Y7VLE6 161 aa4.7□□□□□ -1.66
Ldb3-201ENSMUST00000022327 Krtap19-1Q925H2 87 aa4.66□□□□□ -1.66
Ldb3-201ENSMUST00000022327 Hectd4E9Q2E4 4418 aa4.64□□□□□ -1.67
Ldb3-201ENSMUST00000022327 Krtap9-5A2A5X3 358 aa4.63□□□□□ -1.67
Ldb3-201ENSMUST00000022327 2310046K23RikA0A0A6YVW6 87 aa4.61□□□□□ -1.67
Ldb3-201ENSMUST00000022327 Prm1P02319 51 aa4.58□□□□□ -1.68
Ldb3-201ENSMUST00000022327 Fras1Q80T14 4010 aa4.57□□□□□ -1.68
Ldb3-201ENSMUST00000022327 Fat3Q8BNA6 4555 aa4.57□□□□□ -1.68
Ldb3-201ENSMUST00000022327 Ryr2E9Q401 4966 aaKnown RBP4.55□□□□□ -1.68
Ldb3-201ENSMUST00000022327 Kmt2aP55200 3966 aa4.51□□□□□ -1.69
Ldb3-201ENSMUST00000022327 Sprr2gO70558 76 aa4.51□□□□□ -1.69
Ldb3-201ENSMUST00000022327 Lce3bQ9CQM7 98 aa4.5□□□□□ -1.69
Ldb3-201ENSMUST00000022327 Dnah6E9Q0B6 4144 aa4.49□□□□□ -1.69
Ldb3-201ENSMUST00000022327 Dnhd1D3Z2X2 4750 aa4.49□□□□□ -1.69
Ldb3-201ENSMUST00000022327 Gm10100J3QK64 120 aa4.46□□□□□ -1.69
Ldb3-201ENSMUST00000022327 Gm10272F7CZ33 110 aa4.44□□□□□ -1.7
Ldb3-201ENSMUST00000022327 Krtap22-2J3QNX6 67 aa4.44□□□□□ -1.7
Ldb3-201ENSMUST00000022327 Lrp1Q91ZX7 4545 aaKnown RBP4.44□□□□□ -1.7
Ldb3-201ENSMUST00000022327 Mt2P02798 61 aa4.44□□□□□ -1.7
Ldb3-201ENSMUST00000022327 Lce3cQ91V05 98 aa4.43□□□□□ -1.7
Ldb3-201ENSMUST00000022327 Dnah7aE9Q0T8 4024 aa4.41□□□□□ -1.7
Ldb3-201ENSMUST00000022327 Ryr3A2AGL3 4863 aa4.41□□□□□ -1.7
Ldb3-201ENSMUST00000022327 Krtap19-2Q925I0 141 aa4.39□□□□□ -1.71
Ldb3-201ENSMUST00000022327 Herc2Q4U2R1 4836 aa4.38□□□□□ -1.71
Ldb3-201ENSMUST00000022327 Kiaa1109A2AAE1 5005 aa4.37□□□□□ -1.71
Ldb3-201ENSMUST00000022327 Gm7735D3YX18 52 aa4.36□□□□□ -1.71
Ldb3-201ENSMUST00000022327 Gm10142J3KMP7 120 aa4.36□□□□□ -1.71
Ldb3-201ENSMUST00000022327 Herc1E9PZP8 4859 aa4.36□□□□□ -1.71
Ldb3-201ENSMUST00000022327 Krtap1-3A2A588 173 aa4.33□□□□□ -1.72
Ldb3-201ENSMUST00000022327 Fat2Q5F226 4351 aa4.33□□□□□ -1.72
Ldb3-201ENSMUST00000022327 Dnah7cA0A087WR13 4024 aa4.32□□□□□ -1.72
Ldb3-201ENSMUST00000022327 Lce3eF8VQJ0 98 aa4.32□□□□□ -1.72
Ldb3-201ENSMUST00000022327 Lce3fQ6PAI4 98 aa4.32□□□□□ -1.72
Ldb3-201ENSMUST00000022327 Krtap31-2Q8CAY5 177 aa4.31□□□□□ -1.72
Ldb3-201ENSMUST00000022327 A030003K21RikA0A1Y7VIM3 128 aa4.3□□□□□ -1.72
Ldb3-201ENSMUST00000022327 Lce3dE9Q8V1 98 aa4.28□□□□□ -1.72
Ldb3-201ENSMUST00000022327 Lce1jD3YUU5 139 aa4.28□□□□□ -1.72
Ldb3-201ENSMUST00000022327 Gm9789Q8BIG3 52 aa4.28□□□□□ -1.72
Ldb3-201ENSMUST00000022327 HydinQ80W93 5154 aa4.28□□□□□ -1.73
Ldb3-201ENSMUST00000022327 Lrp2A2ARV4 4660 aa4.28□□□□□ -1.73
Ldb3-201ENSMUST00000022327 Krtap31-1Q9D644 177 aa4.23□□□□□ -1.73
Ldb3-201ENSMUST00000022327 Lce3aQ497I5 98 aa4.2□□□□□ -1.74
Ldb3-201ENSMUST00000022327 Vps13bQ80TY5 3993 aa4.18□□□□□ -1.74
Ldb3-201ENSMUST00000022327 Sprr2iO70560 76 aa4.16□□□□□ -1.74
Ldb3-201ENSMUST00000022327 PcloQ9QYX7 5068 aa4.14□□□□□ -1.75
Ldb3-201ENSMUST00000022327 Kmt2cQ8BRH4 4903 aa4.13□□□□□ -1.75
Ldb3-201ENSMUST00000022327 Gm10061D3Z714 54 aa4.13□□□□□ -1.75
Ldb3-201ENSMUST00000022327 Gm38119A0A0A6YX29 146 aa4.12□□□□□ -1.75
Ldb3-201ENSMUST00000022327 Krtap4-1Q3UUY3 169 aa4.1□□□□□ -1.75
Ldb3-201ENSMUST00000022327 Krtap9-3Q3V2C1 136 aa4.1□□□□□ -1.75
Ldb3-201ENSMUST00000022327 Krtap19-4Q925H7 84 aa4.09□□□□□ -1.75
Ldb3-201ENSMUST00000022327 Birc6O88738 4882 aa4.07□□□□□ -1.76
Ldb3-201ENSMUST00000022327 Lce1fB9EJP6 147 aa4.02□□□□□ -1.77
Ldb3-201ENSMUST00000022327 Lce1cQ9D1C5 147 aa4.02□□□□□ -1.77
Ldb3-201ENSMUST00000022327 Lce1lQ9D1G7 135 aa4.02□□□□□ -1.77
Ldb3-201ENSMUST00000022327 Lce1dQ9D731 133 aa4.02□□□□□ -1.77
Ldb3-201ENSMUST00000022327 Pkhd1E9PZ36 4059 aa4.02□□□□□ -1.77
Ldb3-201ENSMUST00000022327 Pkhd1l1Q80ZA4 4249 aa4□□□□□ -1.77
Ldb3-201ENSMUST00000022327 Lce1gQ9D195 139 aa4□□□□□ -1.77
Ldb3-201ENSMUST00000022327 Lce1iQ9D6P5 149 aa4□□□□□ -1.77
Ldb3-201ENSMUST00000022327 Lce1hQ9D6R3 140 aa4□□□□□ -1.77
Ldb3-201ENSMUST00000022327 Gm6217A0A1Y7VJK9 128 aa3.99□□□□□ -1.77
Ldb3-201ENSMUST00000022327 Gm11569B1AQB1 180 aa3.98□□□□□ -1.77
Ldb3-201ENSMUST00000022327 Lce1bQ9D149 137 aa3.98□□□□□ -1.77
Ldb3-201ENSMUST00000022327 Gm10024A0A0A0MQA4 119 aa3.98□□□□□ -1.77
Ldb3-201ENSMUST00000022327 Lce1eQ9D139 143 aa3.95□□□□□ -1.78
Ldb3-201ENSMUST00000022327 Lce1a2Q9D1K4 149 aa3.89□□□□□ -1.79
Ldb3-201ENSMUST00000022327 Sprr2eO70556 76 aa3.88□□□□□ -1.79
Ldb3-201ENSMUST00000022327 Gm11563B1AQ90 168 aa3.87□□□□□ -1.79
Ldb3-201ENSMUST00000022327 Krtap4-7Q9D732 168 aa3.87□□□□□ -1.79
Ldb3-201ENSMUST00000022327 Mdn1A2ANY6 5589 aaKnown RBP3.83□□□□□ -1.8
Ldb3-201ENSMUST00000022327 Sprr2dO70555 85 aa3.79□□□□□ -1.8
Ldb3-201ENSMUST00000022327 Ubr4A2AN08 5180 aa3.79□□□□□ -1.8
Ldb3-201ENSMUST00000022327 A0A1Y7VJH8 109 aa3.79□□□□□ -1.8
Ldb3-201ENSMUST00000022327 Krtap28-10A0A1Y7VP58 119 aa3.78□□□□□ -1.8
Retrieved 100 of 22,080 RNA–protein pairs in 117.6 ms